RNA–Protein interactions for RNA: ENST00000351677.6

PTPN11-201, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPN11, Length 6,101 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-201ENST00000351677 NBPF3Q9H094 633 aa17.14■□□□□ 0.33
PTPN11-201ENST00000351677 TXLNGQ9NUQ3 528 aa17.14■□□□□ 0.33
PTPN11-201ENST00000351677 PIM2Q9P1W9 311 aa17.14■□□□□ 0.33
PTPN11-201ENST00000351677 EMSYQ7Z589 1322 aa17.14■□□□□ 0.33
PTPN11-201ENST00000351677 CASP2P42575 452 aa17.14■□□□□ 0.33
PTPN11-201ENST00000351677 Q9H521 79 aa17.14■□□□□ 0.33
PTPN11-201ENST00000351677 KIAA1586Q9HCI6 787 aa17.14■□□□□ 0.33
PTPN11-201ENST00000351677 MLXIPLQ9NP71 852 aa17.14■□□□□ 0.33
PTPN11-201ENST00000351677 DLC1Q96QB1 1528 aa17.14■□□□□ 0.33
PTPN11-201ENST00000351677 PDIA6Q15084 440 aa17.14■□□□□ 0.33
PTPN11-201ENST00000351677 CYFIP1Q7L576 1253 aa17.14■□□□□ 0.33
PTPN11-201ENST00000351677 ZNF302Q9NR11 478 aa17.14■□□□□ 0.33
PTPN11-201ENST00000351677 NOC2LQ9Y3T9 749 aaKnown RBP17.14■□□□□ 0.33
PTPN11-201ENST00000351677 FLT1P17948 1338 aa17.13■□□□□ 0.33
PTPN11-201ENST00000351677 IQANK1A0A1B0GTG1 560 aa17.13■□□□□ 0.33
PTPN11-201ENST00000351677 KRT3P12035 628 aa17.13■□□□□ 0.33
PTPN11-201ENST00000351677 HP1BP3Q5SSJ5 553 aaPredicted RBP17.13■□□□□ 0.33
PTPN11-201ENST00000351677 SPOPLQ6IQ16 392 aa17.13■□□□□ 0.33
PTPN11-201ENST00000351677 RBM41Q96IZ5 413 aaKnown RBP17.13■□□□□ 0.33
PTPN11-201ENST00000351677 HOXC10Q9NYD6 342 aa17.13■□□□□ 0.33
PTPN11-201ENST00000351677 SEL1LQ9UBV2 794 aa17.13■□□□□ 0.33
PTPN11-201ENST00000351677 PMS2P54278 862 aa17.13■□□□□ 0.33
PTPN11-201ENST00000351677 TSTA3Q13630 321 aaPredicted RBP17.13■□□□□ 0.33
PTPN11-201ENST00000351677 MYLK4Q86YV6 388 aaPredicted RBP17.13■□□□□ 0.33
PTPN11-201ENST00000351677 SP8Q8IXZ3 490 aa17.13■□□□□ 0.33
PTPN11-201ENST00000351677 CCSER1Q9C0I3 900 aa17.13■□□□□ 0.33
PTPN11-201ENST00000351677 ACTR5Q9H9F9 607 aaPredicted RBP17.13■□□□□ 0.33
PTPN11-201ENST00000351677 MTMR4Q9NYA4 1195 aa17.13■□□□□ 0.33
PTPN11-201ENST00000351677 INTUQ9ULD6 942 aa17.13■□□□□ 0.33
PTPN11-201ENST00000351677 TBC1D1Q86TI0 1168 aaPredicted RBP17.13■□□□□ 0.33
PTPN11-201ENST00000351677 POLR3FQ9H1D9 316 aaPredicted RBP17.13■□□□□ 0.33
PTPN11-201ENST00000351677 PEX19P40855 299 aa17.13■□□□□ 0.33
PTPN11-201ENST00000351677 ARMCX2Q7L311 632 aa17.13■□□□□ 0.33
PTPN11-201ENST00000351677 BBS5Q8N3I7 341 aa17.13■□□□□ 0.33
PTPN11-201ENST00000351677 DAGLAQ9Y4D2 1042 aa17.13■□□□□ 0.33
PTPN11-201ENST00000351677 HEY1Q9Y5J3 304 aa17.13■□□□□ 0.33
PTPN11-201ENST00000351677 CLTCQ00610 1675 aaKnown RBP17.13■□□□□ 0.33
PTPN11-201ENST00000351677 RASA4BC9J798 803 aa17.13■□□□□ 0.33
PTPN11-201ENST00000351677 RASA4O43374 803 aa17.13■□□□□ 0.33
PTPN11-201ENST00000351677 CAMTA2O94983 1202 aa17.13■□□□□ 0.33
PTPN11-201ENST00000351677 NCF2P19878 526 aaPredicted RBP17.13■□□□□ 0.33
PTPN11-201ENST00000351677 MUM1L1Q5H9M0 696 aa17.13■□□□□ 0.33
PTPN11-201ENST00000351677 FAM47EQ6ZV65 393 aa17.13■□□□□ 0.33
PTPN11-201ENST00000351677 RAB44Q7Z6P3 723 aaPredicted RBP17.13■□□□□ 0.33
PTPN11-201ENST00000351677 ADSSL1Q8N142 457 aa17.13■□□□□ 0.33
PTPN11-201ENST00000351677 TTC17Q96AE7 1141 aa17.13■□□□□ 0.33
PTPN11-201ENST00000351677 PITPNM3Q9BZ71 974 aa17.13■□□□□ 0.33
PTPN11-201ENST00000351677 LMTK2Q8IWU2 1503 aa17.13■□□□□ 0.33
PTPN11-201ENST00000351677 FXR1P51114 621 aaKnown RBP eCLIP17.12■□□□□ 0.33
PTPN11-201ENST00000351677 DSTYKQ6XUX3 929 aa17.12■□□□□ 0.33
PTPN11-201ENST00000351677 TBC1D16Q8TBP0 767 aa17.12■□□□□ 0.33
PTPN11-201ENST00000351677 SLC10A4Q96EP9 437 aa17.12■□□□□ 0.33
PTPN11-201ENST00000351677 AGPAT5Q9NUQ2 364 aa17.12■□□□□ 0.33
PTPN11-201ENST00000351677 TRIM10Q9UDY6 481 aa17.12■□□□□ 0.33
PTPN11-201ENST00000351677 PTPRUQ92729 1446 aa17.12■□□□□ 0.33
PTPN11-201ENST00000351677 LUC7L3O95232 432 aaKnown RBP17.12■□□□□ 0.33
PTPN11-201ENST00000351677 SOX5P35711 763 aa17.12■□□□□ 0.33
PTPN11-201ENST00000351677 RHPN2Q8IUC4 686 aa17.12■□□□□ 0.33
PTPN11-201ENST00000351677 SRRM1Q8IYB3 904 aaKnown RBP17.12■□□□□ 0.33
PTPN11-201ENST00000351677 SH2D3AQ9BRG2 576 aa17.12■□□□□ 0.33
PTPN11-201ENST00000351677 PCSK1NQ9UHG2 260 aa17.12■□□□□ 0.33
PTPN11-201ENST00000351677 C1orf167Q5SNV9 1468 aa17.12■□□□□ 0.33
PTPN11-201ENST00000351677 GRID2IPA4D2P6 1211 aa17.12■□□□□ 0.33
PTPN11-201ENST00000351677 GNA15P30679 374 aa17.12■□□□□ 0.33
PTPN11-201ENST00000351677 GPC3P51654 580 aa17.12■□□□□ 0.33
PTPN11-201ENST00000351677 PSMC5P62195 406 aa17.12■□□□□ 0.33
PTPN11-201ENST00000351677 VSNL1P62760 191 aa17.12■□□□□ 0.33
PTPN11-201ENST00000351677 BEND6Q5SZJ8 279 aaPredicted RBP17.12■□□□□ 0.33
PTPN11-201ENST00000351677 KRT39Q6A163 491 aa17.12■□□□□ 0.33
PTPN11-201ENST00000351677 PRPF38AQ8NAV1 312 aaKnown RBP17.12■□□□□ 0.33
PTPN11-201ENST00000351677 VCX3AQ9NNX9 186 aa17.12■□□□□ 0.33
PTPN11-201ENST00000351677 UBE4BO95155 1302 aa17.12■□□□□ 0.33
PTPN11-201ENST00000351677 TTC36A6NLP5 189 aa17.12■□□□□ 0.33
PTPN11-201ENST00000351677 SFNP31947 248 aa17.12■□□□□ 0.33
PTPN11-201ENST00000351677 STX1BP61266 288 aa17.12■□□□□ 0.33
PTPN11-201ENST00000351677 RYBPQ8N488 228 aaPredicted RBP17.12■□□□□ 0.33
PTPN11-201ENST00000351677 ARL4CP56559 192 aa17.11■□□□□ 0.33
PTPN11-201ENST00000351677 NFX1Q12986 1120 aaKnown RBP17.11■□□□□ 0.33
PTPN11-201ENST00000351677 SLC12A1Q13621 1099 aa17.11■□□□□ 0.33
PTPN11-201ENST00000351677 PDIA5Q14554 519 aa17.11■□□□□ 0.33
PTPN11-201ENST00000351677 FRMD5Q7Z6J6 570 aa17.11■□□□□ 0.33
PTPN11-201ENST00000351677 LDHDQ86WU2 507 aa17.11■□□□□ 0.33
PTPN11-201ENST00000351677 SPATA4Q8NEY3 305 aa17.11■□□□□ 0.33
PTPN11-201ENST00000351677 ATP6V1E2Q96A05 226 aa17.11■□□□□ 0.33
PTPN11-201ENST00000351677 TAF1DQ9H5J8 278 aaPredicted RBP17.11■□□□□ 0.33
PTPN11-201ENST00000351677 TADA3O75528 432 aa17.11■□□□□ 0.33
PTPN11-201ENST00000351677 CSPG5O95196 566 aa17.11■□□□□ 0.33
PTPN11-201ENST00000351677 S100BP04271 92 aaPredicted RBP17.11■□□□□ 0.33
PTPN11-201ENST00000351677 NR1I3Q14994 352 aa17.11■□□□□ 0.33
PTPN11-201ENST00000351677 MS4A14Q96JA4 679 aa17.11■□□□□ 0.33
PTPN11-201ENST00000351677 ZNF512BQ96KM6 892 aaPredicted RBP17.11■□□□□ 0.33
PTPN11-201ENST00000351677 CPSF3Q9UKF6 684 aaKnown RBP17.11■□□□□ 0.33
PTPN11-201ENST00000351677 KIF3CO14782 793 aa17.11■□□□□ 0.33
PTPN11-201ENST00000351677 EYA4O95677 639 aa17.11■□□□□ 0.33
PTPN11-201ENST00000351677 GUCY2CP25092 1073 aa17.11■□□□□ 0.33
PTPN11-201ENST00000351677 ZNF543Q08ER8 600 aa17.11■□□□□ 0.33
PTPN11-201ENST00000351677 SLC12A6Q9UHW9 1150 aa17.11■□□□□ 0.33
PTPN11-201ENST00000351677 TPX2Q9ULW0 747 aaKnown RBP17.11■□□□□ 0.33
PTPN11-201ENST00000351677 REREQ9P2R6 1566 aa17.11■□□□□ 0.33
PTPN11-201ENST00000351677 A0A0G2JND7 137 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 96.7 ms