RNA–Protein interactions for RNA: ENST00000349038.8

PTBP1-201, Transcript of polypyrimidine tract binding protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTBP1, Length 3,155 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-201ENST00000349038 ECEL1O95672 775 aa16.33■□□□□ 0.2
PTBP1-201ENST00000349038 FESP07332 822 aa16.33■□□□□ 0.2
PTBP1-201ENST00000349038 ASTE1Q2TB18 679 aaPredicted RBP16.33■□□□□ 0.2
PTBP1-201ENST00000349038 TAOK1Q7L7X3 1001 aa16.33■□□□□ 0.2
PTBP1-201ENST00000349038 KCNK18Q7Z418 384 aa16.33■□□□□ 0.2
PTBP1-201ENST00000349038 EXOC3L1Q86VI1 746 aa16.33■□□□□ 0.2
PTBP1-201ENST00000349038 TAB3Q8N5C8 712 aaPredicted RBP16.33■□□□□ 0.2
PTBP1-201ENST00000349038 PIGOQ8TEQ8 1089 aa16.33■□□□□ 0.2
PTBP1-201ENST00000349038 CEP72Q9P209 647 aa16.33■□□□□ 0.2
PTBP1-201ENST00000349038 SCOCQ9UIL1 159 aa16.33■□□□□ 0.2
PTBP1-201ENST00000349038 SSU72P8A0A1W2PR75 194 aa16.32■□□□□ 0.2
PTBP1-201ENST00000349038 TNNI2P48788 182 aa16.32■□□□□ 0.2
PTBP1-201ENST00000349038 TFAP4Q01664 338 aa16.32■□□□□ 0.2
PTBP1-201ENST00000349038 KCNH2Q12809 1159 aa16.32■□□□□ 0.2
PTBP1-201ENST00000349038 ZNF746Q6NUN9 644 aaPredicted RBP16.32■□□□□ 0.2
PTBP1-201ENST00000349038 JAMLQ86YT9 394 aa16.32■□□□□ 0.2
PTBP1-201ENST00000349038 LARP4BQ92615 738 aaKnown RBP16.32■□□□□ 0.2
PTBP1-201ENST00000349038 PBKQ96KB5 322 aa16.32■□□□□ 0.2
PTBP1-201ENST00000349038 MYLK2Q9H1R3 596 aa16.32■□□□□ 0.2
PTBP1-201ENST00000349038 VCXQ9H320 206 aa16.32■□□□□ 0.2
PTBP1-201ENST00000349038 MCM9Q9NXL9 1143 aa16.32■□□□□ 0.2
PTBP1-201ENST00000349038 MTRF1LQ9UGC7 380 aaKnown RBP16.32■□□□□ 0.2
PTBP1-201ENST00000349038 ASIC3Q9UHC3 531 aa16.32■□□□□ 0.2
PTBP1-201ENST00000349038 CLSTN1O94985 981 aa16.32■□□□□ 0.2
PTBP1-201ENST00000349038 BAG2O95816 211 aa16.32■□□□□ 0.2
PTBP1-201ENST00000349038 GSTA1P08263 222 aa16.32■□□□□ 0.2
PTBP1-201ENST00000349038 GM2AP17900 193 aa16.32■□□□□ 0.2
PTBP1-201ENST00000349038 KYNUQ16719 465 aa16.32■□□□□ 0.2
PTBP1-201ENST00000349038 SLC44A5Q8NCS7 719 aa16.32■□□□□ 0.2
PTBP1-201ENST00000349038 TPCN2Q8NHX9 752 aa16.32■□□□□ 0.2
PTBP1-201ENST00000349038 TBCKQ8TEA7 893 aa16.32■□□□□ 0.2
PTBP1-201ENST00000349038 MKNK2Q9HBH9 465 aa16.32■□□□□ 0.2
PTBP1-201ENST00000349038 NAGPAQ9UK23 515 aa16.32■□□□□ 0.2
PTBP1-201ENST00000349038 ARL2BPQ9Y2Y0 163 aa16.32■□□□□ 0.2
PTBP1-201ENST00000349038 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.32■□□□□ 0.2
PTBP1-201ENST00000349038 SP100P23497 879 aaPredicted RBP16.32■□□□□ 0.2
PTBP1-201ENST00000349038 MMP13P45452 471 aa16.32■□□□□ 0.2
PTBP1-201ENST00000349038 CPA2P48052 419 aa16.32■□□□□ 0.2
PTBP1-201ENST00000349038 MXD3Q9BW11 206 aa16.32■□□□□ 0.2
PTBP1-201ENST00000349038 KCNQ5Q9NR82 932 aa16.32■□□□□ 0.2
PTBP1-201ENST00000349038 PCMTD2Q9NV79 361 aa16.32■□□□□ 0.2
PTBP1-201ENST00000349038 LAMB1P07942 1786 aa16.32■□□□□ 0.2
PTBP1-201ENST00000349038 FAM196BA6NMK8 535 aa16.31■□□□□ 0.2
PTBP1-201ENST00000349038 GJC1P36383 396 aa16.31■□□□□ 0.2
PTBP1-201ENST00000349038 MARCKSL1P49006 195 aa16.31■□□□□ 0.2
PTBP1-201ENST00000349038 EIF6P56537 245 aaKnown RBP16.31■□□□□ 0.2
PTBP1-201ENST00000349038 RIPK1Q13546 671 aa16.31■□□□□ 0.2
PTBP1-201ENST00000349038 KIAA1755Q5JYT7 1200 aa16.31■□□□□ 0.2
PTBP1-201ENST00000349038 EMC10Q5UCC4 262 aa16.31■□□□□ 0.2
PTBP1-201ENST00000349038 PNMA1Q8ND90 353 aa16.31■□□□□ 0.2
PTBP1-201ENST00000349038 LRRC8CQ8TDW0 803 aa16.31■□□□□ 0.2
PTBP1-201ENST00000349038 AK8Q96MA6 479 aa16.31■□□□□ 0.2
PTBP1-201ENST00000349038 GORASP1Q9BQQ3 440 aa16.31■□□□□ 0.2
PTBP1-201ENST00000349038 ERP44Q9BS26 406 aa16.31■□□□□ 0.2
PTBP1-201ENST00000349038 IKZF4Q9H2S9 585 aa16.31■□□□□ 0.2
PTBP1-201ENST00000349038 DCP1AQ9NPI6 582 aaPredicted RBP16.31■□□□□ 0.2
PTBP1-201ENST00000349038 NKIRAS1Q9NYS0 192 aa16.31■□□□□ 0.2
PTBP1-201ENST00000349038 PFDN1O60925 122 aa16.31■□□□□ 0.2
PTBP1-201ENST00000349038 RPL21P46778 160 aaKnown RBP16.31■□□□□ 0.2
PTBP1-201ENST00000349038 EIF3BP55884 814 aaKnown RBP16.31■□□□□ 0.2
PTBP1-201ENST00000349038 EVA1CP58658 441 aa16.31■□□□□ 0.2
PTBP1-201ENST00000349038 FKBP3Q00688 224 aaKnown RBP16.31■□□□□ 0.2
PTBP1-201ENST00000349038 MESDQ14696 234 aa16.31■□□□□ 0.2
PTBP1-201ENST00000349038 PDCD2Q16342 344 aaPredicted RBP16.31■□□□□ 0.2
PTBP1-201ENST00000349038 CFAP157Q5JU67 520 aa16.31■□□□□ 0.2
PTBP1-201ENST00000349038 ZFYVE27Q5T4F4 411 aa16.31■□□□□ 0.2
PTBP1-201ENST00000349038 CENPPQ6IPU0 288 aa16.31■□□□□ 0.2
PTBP1-201ENST00000349038 TLCD1Q96CP7 247 aa16.31■□□□□ 0.2
PTBP1-201ENST00000349038 KIAA1683Q9H0B3 1180 aa16.31■□□□□ 0.2
PTBP1-201ENST00000349038 SMCO2A6NFE2 343 aa16.3■□□□□ 0.2
PTBP1-201ENST00000349038 ANKRD63C9JTQ0 380 aa16.3■□□□□ 0.2
PTBP1-201ENST00000349038 ATP9AO75110 1047 aa16.3■□□□□ 0.2
PTBP1-201ENST00000349038 PEX5P50542 639 aa16.3■□□□□ 0.2
PTBP1-201ENST00000349038 GALCP54803 685 aa16.3■□□□□ 0.2
PTBP1-201ENST00000349038 OVGP1Q12889 678 aa16.3■□□□□ 0.2
PTBP1-201ENST00000349038 BNIP1Q12981 228 aa16.3■□□□□ 0.2
PTBP1-201ENST00000349038 RCN1Q15293 331 aa16.3■□□□□ 0.2
PTBP1-201ENST00000349038 TMED2Q15363 201 aa16.3■□□□□ 0.2
PTBP1-201ENST00000349038 SLC35G1Q2M3R5 365 aa16.3■□□□□ 0.2
PTBP1-201ENST00000349038 C6orf118Q5T5N4 469 aa16.3■□□□□ 0.2
PTBP1-201ENST00000349038 NBPF5PQ86XG9 351 aaPredicted RBP16.3■□□□□ 0.2
PTBP1-201ENST00000349038 ECHDC2Q86YB7 292 aa16.3■□□□□ 0.2
PTBP1-201ENST00000349038 ITFG2Q969R8 447 aa16.3■□□□□ 0.2
PTBP1-201ENST00000349038 RNPEPL1Q9HAU8 725 aa16.3■□□□□ 0.2
PTBP1-201ENST00000349038 NIP7Q9Y221 180 aaKnown RBP eCLIP16.3■□□□□ 0.2
PTBP1-201ENST00000349038 SCN7AQ01118 1682 aa16.3■□□□□ 0.2
PTBP1-201ENST00000349038 LAMB2P55268 1798 aa16.3■□□□□ 0.2
PTBP1-201ENST00000349038 POC1B-GALNT4F8VUJ3 575 aa16.3■□□□□ 0.2
PTBP1-201ENST00000349038 ATMINO43313 823 aaPredicted RBP16.3■□□□□ 0.2
PTBP1-201ENST00000349038 FLOT1O75955 427 aa16.3■□□□□ 0.2
PTBP1-201ENST00000349038 TDP2O95551 362 aa16.3■□□□□ 0.2
PTBP1-201ENST00000349038 NTSR2O95665 410 aa16.3■□□□□ 0.2
PTBP1-201ENST00000349038 CALB2P22676 271 aa16.3■□□□□ 0.2
PTBP1-201ENST00000349038 NR2F2P24468 414 aa16.3■□□□□ 0.2
PTBP1-201ENST00000349038 ALDH3A1P30838 453 aa16.3■□□□□ 0.2
PTBP1-201ENST00000349038 AUHQ13825 339 aaKnown RBP16.3■□□□□ 0.2
PTBP1-201ENST00000349038 SLMAPQ14BN4 828 aa16.3■□□□□ 0.2
PTBP1-201ENST00000349038 GALNT17Q6IS24 598 aa16.3■□□□□ 0.2
PTBP1-201ENST00000349038 RFWD3Q6PCD5 774 aa16.3■□□□□ 0.2
PTBP1-201ENST00000349038 FAM13CQ8NE31 585 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms