RNA–Protein interactions for RNA: ENST00000348225.6

PTN-201, Transcript of pleiotrophin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTN, Length 1,614 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-201ENST00000348225 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.48■□□□□ 0.87
PTN-201ENST00000348225 DENND3A2RUS2 1198 aa20.48■□□□□ 0.87
PTN-201ENST00000348225 HBP1O60381 514 aa20.48■□□□□ 0.87
PTN-201ENST00000348225 MAFO75444 373 aaPredicted RBP20.48■□□□□ 0.87
PTN-201ENST00000348225 PSMC2P35998 433 aaKnown RBP20.48■□□□□ 0.87
PTN-201ENST00000348225 SYCP1Q15431 976 aa20.48■□□□□ 0.87
PTN-201ENST00000348225 GJC2Q5T442 439 aaPredicted RBP20.48■□□□□ 0.87
PTN-201ENST00000348225 C12orf56Q8IXR9 622 aa20.48■□□□□ 0.87
PTN-201ENST00000348225 TC2NQ8N9U0 490 aa20.48■□□□□ 0.87
PTN-201ENST00000348225 RETREG2Q8NC44 543 aa20.48■□□□□ 0.87
PTN-201ENST00000348225 OR6J1Q8NGC5 347 aa20.48■□□□□ 0.87
PTN-201ENST00000348225 TMEM174Q8WUU8 243 aa20.48■□□□□ 0.87
PTN-201ENST00000348225 PCMTD1Q96MG8 357 aaPredicted RBP20.48■□□□□ 0.87
PTN-201ENST00000348225 TBX20Q9UMR3 447 aa20.48■□□□□ 0.87
PTN-201ENST00000348225 FRMD4BQ9Y2L6 1034 aa20.48■□□□□ 0.87
PTN-201ENST00000348225 MFAP3LO75121 409 aa20.47■□□□□ 0.87
PTN-201ENST00000348225 AKAP3O75969 853 aa20.47■□□□□ 0.87
PTN-201ENST00000348225 GYPCP04921 128 aa20.47■□□□□ 0.87
PTN-201ENST00000348225 LGALS2P05162 132 aa20.47■□□□□ 0.87
PTN-201ENST00000348225 SMPD1P17405 629 aa20.47■□□□□ 0.87
PTN-201ENST00000348225 CYP2B6P20813 491 aa20.47■□□□□ 0.87
PTN-201ENST00000348225 ARL2P36404 184 aa20.47■□□□□ 0.87
PTN-201ENST00000348225 NAMPTP43490 491 aa20.47■□□□□ 0.87
PTN-201ENST00000348225 FCGRTP55899 365 aa20.47■□□□□ 0.87
PTN-201ENST00000348225 TNFAIP2Q03169 654 aa20.47■□□□□ 0.87
PTN-201ENST00000348225 DEFB115Q30KQ5 88 aa20.47■□□□□ 0.87
PTN-201ENST00000348225 MAP4K3Q8IVH8 894 aa20.47■□□□□ 0.87
PTN-201ENST00000348225 AFG1LQ8WV93 481 aa20.47■□□□□ 0.87
PTN-201ENST00000348225 TCP11Q8WWU5 503 aa20.47■□□□□ 0.87
PTN-201ENST00000348225 TMEM143Q96AN5 459 aa20.47■□□□□ 0.87
PTN-201ENST00000348225 PANX2Q96RD6 677 aa20.47■□□□□ 0.87
PTN-201ENST00000348225 RRAGDQ9NQL2 400 aaPredicted RBP20.47■□□□□ 0.87
PTN-201ENST00000348225 CREBZFQ9NS37 354 aa20.47■□□□□ 0.87
PTN-201ENST00000348225 DMAC2Q9NW81 257 aa20.47■□□□□ 0.87
PTN-201ENST00000348225 RASSF10A6NK89 507 aa20.46■□□□□ 0.87
PTN-201ENST00000348225 PPFIA4O75335 1185 aa20.46■□□□□ 0.87
PTN-201ENST00000348225 XRCC5P13010 732 aaKnown RBP20.46■□□□□ 0.87
PTN-201ENST00000348225 ADKP55263 362 aaKnown RBP20.46■□□□□ 0.87
PTN-201ENST00000348225 FAM186BQ8IYM0 893 aa20.46■□□□□ 0.87
PTN-201ENST00000348225 CPLX3Q8WVH0 158 aa20.46■□□□□ 0.87
PTN-201ENST00000348225 CAPNS2Q96L46 248 aa20.46■□□□□ 0.87
PTN-201ENST00000348225 KIFC3Q9BVG8 833 aa20.46■□□□□ 0.87
PTN-201ENST00000348225 GJD2Q9UKL4 321 aa20.46■□□□□ 0.87
PTN-201ENST00000348225 ZNF215Q9UL58 517 aaPredicted RBP20.46■□□□□ 0.87
PTN-201ENST00000348225 CASP14P31944 242 aa20.45■□□□□ 0.87
PTN-201ENST00000348225 CYP2J2P51589 502 aa20.45■□□□□ 0.87
PTN-201ENST00000348225 GOLGA8FQ08AF8 430 aa20.45■□□□□ 0.87
PTN-201ENST00000348225 GOLGA8DPQ0D2H9 430 aa20.45■□□□□ 0.87
PTN-201ENST00000348225 FIGNQ5HY92 759 aa20.45■□□□□ 0.87
PTN-201ENST00000348225 KCNN1Q92952 543 aa20.45■□□□□ 0.87
PTN-201ENST00000348225 IKZF4Q9H2S9 585 aa20.45■□□□□ 0.87
PTN-201ENST00000348225 TMX1Q9H3N1 280 aa20.45■□□□□ 0.87
PTN-201ENST00000348225 FLRT1Q9NZU1 646 aa20.45■□□□□ 0.87
PTN-201ENST00000348225 ARHGAP28Q9P2N2 729 aa20.45■□□□□ 0.87
PTN-201ENST00000348225 EXOC3O60645 756 aa20.45■□□□□ 0.86
PTN-201ENST00000348225 TRIM21P19474 475 aaKnown RBP20.45■□□□□ 0.86
PTN-201ENST00000348225 GLRA2P23416 452 aa20.45■□□□□ 0.86
PTN-201ENST00000348225 ZNF484Q5JVG2 852 aa20.45■□□□□ 0.86
PTN-201ENST00000348225 IER5Q5VY09 327 aa20.45■□□□□ 0.86
PTN-201ENST00000348225 DEPTORQ8TB45 409 aa20.45■□□□□ 0.86
PTN-201ENST00000348225 BAG1Q99933 345 aaPredicted RBP20.45■□□□□ 0.86
PTN-201ENST00000348225 NAA15Q9BXJ9 866 aaKnown RBP20.45■□□□□ 0.86
PTN-201ENST00000348225 STX10O60499 249 aa20.44■□□□□ 0.86
PTN-201ENST00000348225 AFPP02771 609 aaKnown RBP20.44■□□□□ 0.86
PTN-201ENST00000348225 MMP3P08254 477 aa20.44■□□□□ 0.86
PTN-201ENST00000348225 KCNJ6P48051 423 aa20.44■□□□□ 0.86
PTN-201ENST00000348225 CASP4P49662 377 aa20.44■□□□□ 0.86
PTN-201ENST00000348225 FXR1P51114 621 aaKnown RBP eCLIP20.44■□□□□ 0.86
PTN-201ENST00000348225 ASAP3Q8TDY4 903 aa20.44■□□□□ 0.86
PTN-201ENST00000348225 ADGRA3Q8IWK6 1321 aa20.44■□□□□ 0.86
PTN-201ENST00000348225 LRRIQ4A6NIV6 560 aa20.43■□□□□ 0.86
PTN-201ENST00000348225 ZBTB42B2RXF5 422 aa20.43■□□□□ 0.86
PTN-201ENST00000348225 AOC2O75106 756 aa20.43■□□□□ 0.86
PTN-201ENST00000348225 HOXD8P13378 290 aaPredicted RBP20.43■□□□□ 0.86
PTN-201ENST00000348225 KCNH2Q12809 1159 aa20.43■□□□□ 0.86
PTN-201ENST00000348225 STRN3Q13033 797 aa20.43■□□□□ 0.86
PTN-201ENST00000348225 CCL14Q16627 93 aa20.43■□□□□ 0.86
PTN-201ENST00000348225 DGKDQ16760 1214 aa20.43■□□□□ 0.86
PTN-201ENST00000348225 DCAF17Q5H9S7 520 aaPredicted RBP20.43■□□□□ 0.86
PTN-201ENST00000348225 PSPC1Q8WXF1 523 aaKnown RBP20.43■□□□□ 0.86
PTN-201ENST00000348225 CAPN11Q9UMQ6 739 aa20.43■□□□□ 0.86
PTN-201ENST00000348225 SIK3Q9Y2K2 1263 aa20.43■□□□□ 0.86
PTN-201ENST00000348225 LUC7L2Q9Y383 392 aaKnown RBP20.43■□□□□ 0.86
PTN-201ENST00000348225 COL1A2P08123 1366 aa20.43■□□□□ 0.86
PTN-201ENST00000348225 SIP14410 1827 aa20.42■□□□□ 0.86
PTN-201ENST00000348225 IGKV6-21A0A0C4DH24 114 aa20.42■□□□□ 0.86
PTN-201ENST00000348225 A0A1W2PQJ5 194 aa20.42■□□□□ 0.86
PTN-201ENST00000348225 ARHGAP6O43182 974 aa20.42■□□□□ 0.86
PTN-201ENST00000348225 ZNF865P0CJ78 1059 aaPredicted RBP20.42■□□□□ 0.86
PTN-201ENST00000348225 CYP2C19P33261 490 aa20.42■□□□□ 0.86
PTN-201ENST00000348225 CLCN1P35523 988 aa20.42■□□□□ 0.86
PTN-201ENST00000348225 KRT9P35527 623 aa20.42■□□□□ 0.86
PTN-201ENST00000348225 PSMC4P43686 418 aa20.42■□□□□ 0.86
PTN-201ENST00000348225 APLP1P51693 650 aa20.42■□□□□ 0.86
PTN-201ENST00000348225 LACTBP83111 547 aaPredicted RBP20.42■□□□□ 0.86
PTN-201ENST00000348225 MXD4Q14582 209 aaPredicted RBP20.42■□□□□ 0.86
PTN-201ENST00000348225 BRDTQ58F21 947 aaPredicted RBP20.42■□□□□ 0.86
PTN-201ENST00000348225 PRAMEF19Q5SWL8 479 aa20.42■□□□□ 0.86
PTN-201ENST00000348225 XXYLT1Q8NBI6 393 aa20.42■□□□□ 0.86
PTN-201ENST00000348225 BORCS6Q96GS4 357 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms