RNA–Protein interactions for RNA: ENST00000347849.7

PTPN18-202, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 1 (best) BASIC

Gene PTPN18, Length 2,472 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-202ENST00000347849 COL11A1P12107 1806 aaPredicted RBP23.21■■□□□ 1.31
PTPN18-202ENST00000347849 GNA14O95837 355 aa23.2■■□□□ 1.3
PTPN18-202ENST00000347849 ZNF131P52739 623 aa23.2■■□□□ 1.3
PTPN18-202ENST00000347849 VGLL4Q14135 290 aa23.2■■□□□ 1.3
PTPN18-202ENST00000347849 KLHDC7AQ5VTJ3 777 aa23.2■■□□□ 1.3
PTPN18-202ENST00000347849 KAT2BQ92831 832 aa23.2■■□□□ 1.3
PTPN18-202ENST00000347849 LSM14BQ9BX40 385 aaKnown RBP23.2■■□□□ 1.3
PTPN18-202ENST00000347849 TYW1Q9NV66 732 aaKnown RBP23.2■■□□□ 1.3
PTPN18-202ENST00000347849 ARHGEF35A5YM69 484 aa23.2■■□□□ 1.3
PTPN18-202ENST00000347849 HIP1RO75146 1068 aa23.2■■□□□ 1.3
PTPN18-202ENST00000347849 P4HBP07237 508 aaKnown RBP23.2■■□□□ 1.3
PTPN18-202ENST00000347849 GAP43P17677 238 aa23.2■■□□□ 1.3
PTPN18-202ENST00000347849 DNA2P51530 1060 aa23.2■■□□□ 1.3
PTPN18-202ENST00000347849 PADI6Q6TGC4 694 aa23.2■■□□□ 1.3
PTPN18-202ENST00000347849 ZNF720Q7Z2F6 126 aa23.2■■□□□ 1.3
PTPN18-202ENST00000347849 CAVIN3Q969G5 261 aa23.2■■□□□ 1.3
PTPN18-202ENST00000347849 MAP3K20Q9NYL2 800 aaKnown RBP23.2■■□□□ 1.3
PTPN18-202ENST00000347849 SNCAIPQ9Y6H5 919 aa23.2■■□□□ 1.3
PTPN18-202ENST00000347849 C19orf81C9J6K1 198 aa23.19■■□□□ 1.3
PTPN18-202ENST00000347849 GLI1P08151 1106 aa23.19■■□□□ 1.3
PTPN18-202ENST00000347849 GUCY2CP25092 1073 aa23.19■■□□□ 1.3
PTPN18-202ENST00000347849 PLS1Q14651 629 aa23.19■■□□□ 1.3
PTPN18-202ENST00000347849 ODR4Q5SWX8 454 aa23.19■■□□□ 1.3
PTPN18-202ENST00000347849 MMS22LQ6ZRQ5 1243 aa23.19■■□□□ 1.3
PTPN18-202ENST00000347849 IFT81Q8WYA0 676 aa23.19■■□□□ 1.3
PTPN18-202ENST00000347849 NFU1Q9UMS0 254 aa23.19■■□□□ 1.3
PTPN18-202ENST00000347849 SPDYE16A6NNV3 312 aaPredicted RBP23.19■■□□□ 1.3
PTPN18-202ENST00000347849 RGS20O76081 388 aa23.19■■□□□ 1.3
PTPN18-202ENST00000347849 ACTN1P12814 892 aa23.19■■□□□ 1.3
PTPN18-202ENST00000347849 MUTP22033 750 aa23.19■■□□□ 1.3
PTPN18-202ENST00000347849 CARSP49589 748 aaKnown RBP23.19■■□□□ 1.3
PTPN18-202ENST00000347849 NNTQ13423 1086 aa23.19■■□□□ 1.3
PTPN18-202ENST00000347849 TREML2Q5T2D2 321 aa23.19■■□□□ 1.3
PTPN18-202ENST00000347849 CACNA2D4Q7Z3S7 1137 aa23.19■■□□□ 1.3
PTPN18-202ENST00000347849 NOX5Q96PH1 765 aa23.19■■□□□ 1.3
PTPN18-202ENST00000347849 PCDHB13Q9Y5F0 798 aa23.19■■□□□ 1.3
PTPN18-202ENST00000347849 ESYT3A0FGR9 886 aa23.18■■□□□ 1.3
PTPN18-202ENST00000347849 ZSCAN5CA6NGD5 496 aaPredicted RBP23.18■■□□□ 1.3
PTPN18-202ENST00000347849 NDUFAB1O14561 156 aa23.18■■□□□ 1.3
PTPN18-202ENST00000347849 CALUO43852 315 aaPredicted RBP23.18■■□□□ 1.3
PTPN18-202ENST00000347849 ZEB2O60315 1214 aa23.18■■□□□ 1.3
PTPN18-202ENST00000347849 NR3C2P08235 984 aa23.18■■□□□ 1.3
PTPN18-202ENST00000347849 FAM153BP0C7A2 387 aa23.18■■□□□ 1.3
PTPN18-202ENST00000347849 SKOR1P84550 965 aa23.18■■□□□ 1.3
PTPN18-202ENST00000347849 FAM153CQ494X1 144 aa23.18■■□□□ 1.3
PTPN18-202ENST00000347849 CFAP221Q4G0U5 840 aa23.18■■□□□ 1.3
PTPN18-202ENST00000347849 FAM178BQ8IXR5 827 aa23.18■■□□□ 1.3
PTPN18-202ENST00000347849 EPB41L5Q9HCM4 733 aa23.18■■□□□ 1.3
PTPN18-202ENST00000347849 ARMCX3Q9UH62 379 aaPredicted RBP23.18■■□□□ 1.3
PTPN18-202ENST00000347849 FAM153AQ9UHL3 310 aa23.18■■□□□ 1.3
PTPN18-202ENST00000347849 PJA2O43164 708 aa23.18■■□□□ 1.3
PTPN18-202ENST00000347849 TLR2O60603 784 aa23.18■■□□□ 1.3
PTPN18-202ENST00000347849 POLR2FP61218 127 aaKnown RBP23.18■■□□□ 1.3
PTPN18-202ENST00000347849 SUPT20HL1Q3ZLR7 823 aa23.18■■□□□ 1.3
PTPN18-202ENST00000347849 PDXDC1Q6P996 788 aa23.18■■□□□ 1.3
PTPN18-202ENST00000347849 VSIG10LQ86VR7 867 aa23.18■■□□□ 1.3
PTPN18-202ENST00000347849 IFT20Q8IY31 132 aa23.18■■□□□ 1.3
PTPN18-202ENST00000347849 CCDC43Q96MW1 224 aaKnown RBP23.18■■□□□ 1.3
PTPN18-202ENST00000347849 SORBS3O60504 671 aa23.17■■□□□ 1.3
PTPN18-202ENST00000347849 FDX1P10109 184 aa23.17■■□□□ 1.3
PTPN18-202ENST00000347849 QARSP47897 775 aaKnown RBP23.17■■□□□ 1.3
PTPN18-202ENST00000347849 RARRES1P49788 294 aa23.17■■□□□ 1.3
PTPN18-202ENST00000347849 TDRD12Q587J7 1177 aaKnown RBP23.17■■□□□ 1.3
PTPN18-202ENST00000347849 DCAF17Q5H9S7 520 aaPredicted RBP23.17■■□□□ 1.3
PTPN18-202ENST00000347849 NOL9Q5SY16 702 aaKnown RBP23.17■■□□□ 1.3
PTPN18-202ENST00000347849 FBXW10Q5XX13 1052 aa23.17■■□□□ 1.3
PTPN18-202ENST00000347849 A1CFQ9NQ94 594 aaKnown RBP23.17■■□□□ 1.3
PTPN18-202ENST00000347849 RNF181Q9P0P0 153 aa23.17■■□□□ 1.3
PTPN18-202ENST00000347849 PPP2R3BQ9Y5P8 575 aa23.17■■□□□ 1.3
PTPN18-202ENST00000347849 SLC9A1P19634 815 aa23.17■■□□□ 1.3
PTPN18-202ENST00000347849 GUCY2DQ02846 1103 aa23.17■■□□□ 1.3
PTPN18-202ENST00000347849 ASTE1Q2TB18 679 aaPredicted RBP23.17■■□□□ 1.3
PTPN18-202ENST00000347849 DPY19L2P1Q6NXN4 242 aa23.17■■□□□ 1.3
PTPN18-202ENST00000347849 SPON1Q9HCB6 807 aa23.17■■□□□ 1.3
PTPN18-202ENST00000347849 TBC1D22BQ9NU19 505 aa23.17■■□□□ 1.3
PTPN18-202ENST00000347849 TMOD4Q9NZQ9 345 aa23.17■■□□□ 1.3
PTPN18-202ENST00000347849 GLE1Q53GS7 698 aaKnown RBP23.16■■□□□ 1.3
PTPN18-202ENST00000347849 CFAP58Q5T655 872 aa23.16■■□□□ 1.3
PTPN18-202ENST00000347849 HGSNATQ68CP4 663 aa23.16■■□□□ 1.3
PTPN18-202ENST00000347849 PLA2G4FQ68DD2 849 aa23.16■■□□□ 1.3
PTPN18-202ENST00000347849 FRMD5Q7Z6J6 570 aa23.16■■□□□ 1.3
PTPN18-202ENST00000347849 GPRC5CQ9NQ84 441 aa23.16■■□□□ 1.3
PTPN18-202ENST00000347849 CYP39A1Q9NYL5 469 aa23.16■■□□□ 1.3
PTPN18-202ENST00000347849 ODF2LQ9ULJ1 636 aa23.16■■□□□ 1.3
PTPN18-202ENST00000347849 TISP43B9A030 160 aa23.16■■□□□ 1.3
PTPN18-202ENST00000347849 EIF3DO15371 548 aaKnown RBP eCLIP23.16■■□□□ 1.3
PTPN18-202ENST00000347849 TNFRSF8P28908 595 aa23.16■■□□□ 1.3
PTPN18-202ENST00000347849 NPEPPSP55786 919 aa23.16■■□□□ 1.3
PTPN18-202ENST00000347849 FSTL1Q12841 308 aa23.16■■□□□ 1.3
PTPN18-202ENST00000347849 MOB2Q70IA6 237 aa23.16■■□□□ 1.3
PTPN18-202ENST00000347849 SUGP1Q8IWZ8 645 aaKnown RBP23.16■■□□□ 1.3
PTPN18-202ENST00000347849 NEK9Q8TD19 979 aa23.16■■□□□ 1.3
PTPN18-202ENST00000347849 SBF1O95248 1867 aa23.15■■□□□ 1.3
PTPN18-202ENST00000347849 HEXIM1O94992 359 aaKnown RBP23.15■■□□□ 1.3
PTPN18-202ENST00000347849 YBX3P16989 372 aaKnown RBP eCLIP23.15■■□□□ 1.3
PTPN18-202ENST00000347849 YWHABP31946 246 aaKnown RBP23.15■■□□□ 1.3
PTPN18-202ENST00000347849 GUCY2FP51841 1108 aa23.15■■□□□ 1.3
PTPN18-202ENST00000347849 RNASE9P60153 205 aaKnown RBP23.15■■□□□ 1.3
PTPN18-202ENST00000347849 IQCKQ8N0W5 287 aa23.15■■□□□ 1.3
PTPN18-202ENST00000347849 TEX13BQ9BXU2 312 aa23.15■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms