RNA–Protein interactions for RNA: ENST00000347547.6

LRP8-202, Transcript of LDL receptor related protein 8, humanhuman

TSL 1 (best) BASIC

Gene LRP8, Length 2,382 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP8-202ENST00000347547 TMEM237Q96Q45 408 aa16.91■□□□□ 0.3
LRP8-202ENST00000347547 CYP39A1Q9NYL5 469 aa16.91■□□□□ 0.3
LRP8-202ENST00000347547 NKX1-2Q9UD57 310 aaPredicted RBP16.91■□□□□ 0.3
LRP8-202ENST00000347547 TRIM33Q9UPN9 1127 aa16.91■□□□□ 0.3
LRP8-202ENST00000347547 PCDHA3Q9Y5H8 950 aa16.91■□□□□ 0.3
LRP8-202ENST00000347547 SMCO2A6NFE2 343 aa16.9■□□□□ 0.3
LRP8-202ENST00000347547 PEX11AO75192 247 aa16.9■□□□□ 0.3
LRP8-202ENST00000347547 TMEM253P0C7T8 217 aa16.9■□□□□ 0.3
LRP8-202ENST00000347547 PON1P27169 355 aa16.9■□□□□ 0.3
LRP8-202ENST00000347547 CHRNDQ07001 517 aa16.9■□□□□ 0.3
LRP8-202ENST00000347547 KCTD19Q17RG1 926 aaPredicted RBP16.9■□□□□ 0.3
LRP8-202ENST00000347547 VSTM1Q6UX27 236 aa16.9■□□□□ 0.3
LRP8-202ENST00000347547 FRMD5Q7Z6J6 570 aa16.9■□□□□ 0.3
LRP8-202ENST00000347547 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.9■□□□□ 0.35e-6■■■■■ 81.8
LRP8-202ENST00000347547 CNBD1Q8NA66 436 aa16.9■□□□□ 0.3
LRP8-202ENST00000347547 KCNV2Q8TDN2 545 aa16.9■□□□□ 0.3
LRP8-202ENST00000347547 SNX29Q8TEQ0 813 aa16.9■□□□□ 0.3
LRP8-202ENST00000347547 TEKT4Q8WW24 435 aa16.9■□□□□ 0.3
LRP8-202ENST00000347547 NGLY1Q96IV0 654 aa16.9■□□□□ 0.3
LRP8-202ENST00000347547 SERPINB12Q96P63 405 aa16.9■□□□□ 0.3
LRP8-202ENST00000347547 HDAC9Q9UKV0 1011 aa16.9■□□□□ 0.3
LRP8-202ENST00000347547 RPL26L1Q9UNX3 145 aaKnown RBP16.9■□□□□ 0.3
LRP8-202ENST00000347547 NHSQ6T4R5 1651 aa16.9■□□□□ 0.3
LRP8-202ENST00000347547 SBF2Q86WG5 1849 aa16.9■□□□□ 0.3
LRP8-202ENST00000347547 ESYT2A0FGR8 921 aa16.89■□□□□ 0.3
LRP8-202ENST00000347547 TMEM120BA0PK00 339 aa16.89■□□□□ 0.3
LRP8-202ENST00000347547 CETN3O15182 167 aa16.89■□□□□ 0.3
LRP8-202ENST00000347547 TPBGLP0DKB5 382 aa16.89■□□□□ 0.3
LRP8-202ENST00000347547 CYP2D6P10635 497 aa16.89■□□□□ 0.3
LRP8-202ENST00000347547 ALAS1P13196 640 aa16.89■□□□□ 0.3
LRP8-202ENST00000347547 SLC9A1P19634 815 aa16.89■□□□□ 0.3
LRP8-202ENST00000347547 ATP5DP30049 168 aa16.89■□□□□ 0.3
LRP8-202ENST00000347547 ALDH3A1P30838 453 aa16.89■□□□□ 0.3
LRP8-202ENST00000347547 RPL21P46778 160 aaKnown RBP16.89■□□□□ 0.3
LRP8-202ENST00000347547 GALCP54803 685 aa16.89■□□□□ 0.3
LRP8-202ENST00000347547 TFAP4Q01664 338 aa16.89■□□□□ 0.3
LRP8-202ENST00000347547 DNAAF5Q86Y56 855 aa16.89■□□□□ 0.3
LRP8-202ENST00000347547 ANKLE1Q8NAG6 615 aa16.89■□□□□ 0.3
LRP8-202ENST00000347547 SLC30A5Q8TAD4 765 aa16.89■□□□□ 0.3
LRP8-202ENST00000347547 PIGOQ8TEQ8 1089 aa16.89■□□□□ 0.3
LRP8-202ENST00000347547 RMDN2Q96LZ7 410 aa16.89■□□□□ 0.3
LRP8-202ENST00000347547 KANSL2Q9H9L4 492 aa16.89■□□□□ 0.3
LRP8-202ENST00000347547 USP40Q9NVE5 1235 aa16.89■□□□□ 0.3
LRP8-202ENST00000347547 KLHL14Q9P2G3 628 aa16.89■□□□□ 0.3
LRP8-202ENST00000347547 PPP1R9AQ9ULJ8 1098 aa16.89■□□□□ 0.3
LRP8-202ENST00000347547 POTEFA5A3E0 1075 aa16.89■□□□□ 0.29
LRP8-202ENST00000347547 EYA4O95677 639 aa16.89■□□□□ 0.29
LRP8-202ENST00000347547 AFPP02771 609 aaKnown RBP16.89■□□□□ 0.29
LRP8-202ENST00000347547 POTEIP0CG38 1075 aa16.89■□□□□ 0.29
LRP8-202ENST00000347547 POTEJP0CG39 1038 aa16.89■□□□□ 0.29
LRP8-202ENST00000347547 RXRBP28702 533 aa16.89■□□□□ 0.29
LRP8-202ENST00000347547 PEX5P50542 639 aa16.89■□□□□ 0.29
LRP8-202ENST00000347547 ADAM9Q13443 819 aa16.89■□□□□ 0.29
LRP8-202ENST00000347547 EXOC3L4Q17RC7 722 aa16.89■□□□□ 0.29
LRP8-202ENST00000347547 FAM98CQ17RN3 349 aaKnown RBP16.89■□□□□ 0.29
LRP8-202ENST00000347547 GNPTABQ3T906 1256 aa16.89■□□□□ 0.29
LRP8-202ENST00000347547 POTEEQ6S8J3 1075 aa16.89■□□□□ 0.29
LRP8-202ENST00000347547 TRMT10CQ7L0Y3 403 aaKnown RBP16.89■□□□□ 0.29
LRP8-202ENST00000347547 ASAP3Q8TDY4 903 aa16.89■□□□□ 0.29
LRP8-202ENST00000347547 ETNK1Q9HBU6 452 aa16.89■□□□□ 0.29
LRP8-202ENST00000347547 DBR1Q9UK59 544 aaKnown RBP16.89■□□□□ 0.29
LRP8-202ENST00000347547 BTAF1O14981 1849 aa16.88■□□□□ 0.29
LRP8-202ENST00000347547 VCAM1P19320 739 aa16.88■□□□□ 0.29
LRP8-202ENST00000347547 MGAT5Q09328 741 aa16.88■□□□□ 0.29
LRP8-202ENST00000347547 SNX1Q13596 522 aa16.88■□□□□ 0.29
LRP8-202ENST00000347547 UBAP2Q5T6F2 1119 aaKnown RBP16.88■□□□□ 0.29
LRP8-202ENST00000347547 TRIM68Q6AZZ1 485 aa16.88■□□□□ 0.29
LRP8-202ENST00000347547 CCDC65Q8IXS2 484 aa16.88■□□□□ 0.29
LRP8-202ENST00000347547 OLIG1Q8TAK6 271 aa16.88■□□□□ 0.29
LRP8-202ENST00000347547 INPP5DQ92835 1189 aa16.88■□□□□ 0.29
LRP8-202ENST00000347547 TMX4Q9H1E5 349 aaPredicted RBP16.88■□□□□ 0.29
LRP8-202ENST00000347547 BMP2KQ9NSY1 1161 aaPredicted RBP16.88■□□□□ 0.29
LRP8-202ENST00000347547 PCK1P35558 622 aa16.88■□□□□ 0.29
LRP8-202ENST00000347547 SLCO1A2P46721 670 aa16.88■□□□□ 0.29
LRP8-202ENST00000347547 KLC1Q07866 573 aa16.88■□□□□ 0.29
LRP8-202ENST00000347547 MTFR1Q15390 333 aa16.88■□□□□ 0.29
LRP8-202ENST00000347547 WASHC2DQ5SRD0 308 aa16.88■□□□□ 0.29
LRP8-202ENST00000347547 CGB2Q6NT52 195 aa16.88■□□□□ 0.29
LRP8-202ENST00000347547 DHX37Q8IY37 1157 aaKnown RBP16.88■□□□□ 0.29
LRP8-202ENST00000347547 U2AF1L4Q8WU68 220 aaKnown RBP16.88■□□□□ 0.29
LRP8-202ENST00000347547 SCFD1Q8WVM8 642 aa16.88■□□□□ 0.29
LRP8-202ENST00000347547 ARHGEF2Q92974 986 aaKnown RBP16.88■□□□□ 0.29
LRP8-202ENST00000347547 ART4Q93070 314 aa16.88■□□□□ 0.29
LRP8-202ENST00000347547 NSUN4Q96CB9 384 aaKnown RBP16.88■□□□□ 0.29
LRP8-202ENST00000347547 NUDT12Q9BQG2 462 aa16.88■□□□□ 0.29
LRP8-202ENST00000347547 FGFBP2Q9BYJ0 223 aa16.88■□□□□ 0.29
LRP8-202ENST00000347547 CCDC113Q9H0I3 377 aa16.88■□□□□ 0.29
LRP8-202ENST00000347547 SIX2Q9NPC8 291 aa16.88■□□□□ 0.29
LRP8-202ENST00000347547 WDR35Q9P2L0 1181 aa16.88■□□□□ 0.29
LRP8-202ENST00000347547 PITPNM2Q9BZ72 1349 aa16.88■□□□□ 0.29
LRP8-202ENST00000347547 ROBO3Q96MS0 1386 aa16.88■□□□□ 0.29
LRP8-202ENST00000347547 SPDYE5A6NIY4 337 aa16.87■□□□□ 0.29
LRP8-202ENST00000347547 FGFR4P22455 802 aa16.87■□□□□ 0.29
LRP8-202ENST00000347547 CTNNA2P26232 953 aa16.87■□□□□ 0.29
LRP8-202ENST00000347547 RAD23BP54727 409 aa16.87■□□□□ 0.29
LRP8-202ENST00000347547 LRRC14Q15048 493 aa16.87■□□□□ 0.29
LRP8-202ENST00000347547 EPHA7Q15375 998 aa16.87■□□□□ 0.29
LRP8-202ENST00000347547 TSNAXIP1Q2TAA8 658 aa16.87■□□□□ 0.29
LRP8-202ENST00000347547 HYIQ5T013 277 aa16.87■□□□□ 0.29
LRP8-202ENST00000347547 SUSD4Q5VX71 490 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms