RNA–Protein interactions for RNA: ENST00000345617.7

HDAC4-201, Transcript of histone deacetylase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC4, Length 8,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-201ENST00000345617 CNPY3Q9BT09 278 aa20.58■□□□□ 0.89
HDAC4-201ENST00000345617 PARVBQ9HBI1 364 aa20.58■□□□□ 0.89
HDAC4-201ENST00000345617 NSMCE4AQ9NXX6 385 aa20.58■□□□□ 0.89
HDAC4-201ENST00000345617 ADAMTS12P58397 1594 aa20.58■□□□□ 0.89
HDAC4-201ENST00000345617 TOGARAM2Q6ZUX3 1019 aa20.58■□□□□ 0.89
HDAC4-201ENST00000345617 SETD3Q86TU7 594 aaPredicted RBP20.58■□□□□ 0.89
HDAC4-201ENST00000345617 CATSPER3Q86XQ3 398 aa20.58■□□□□ 0.89
HDAC4-201ENST00000345617 ST13P5Q8NFI4 369 aaPredicted RBP20.58■□□□□ 0.89
HDAC4-201ENST00000345617 CCDC17Q96LX7 622 aa20.58■□□□□ 0.89
HDAC4-201ENST00000345617 LRRC4Q9HBW1 653 aa20.58■□□□□ 0.89
HDAC4-201ENST00000345617 MAP3K13O43283 966 aa20.58■□□□□ 0.88
HDAC4-201ENST00000345617 LAMB3Q13751 1172 aa20.58■□□□□ 0.88
HDAC4-201ENST00000345617 STAT4Q14765 748 aa20.58■□□□□ 0.88
HDAC4-201ENST00000345617 KCNK16Q96T55 309 aa20.58■□□□□ 0.88
HDAC4-201ENST00000345617 LRRIQ3A6PVS8 624 aaPredicted RBP20.58■□□□□ 0.88
HDAC4-201ENST00000345617 RCAN1P53805 252 aa20.58■□□□□ 0.88
HDAC4-201ENST00000345617 PTK2BQ14289 1009 aa20.58■□□□□ 0.88
HDAC4-201ENST00000345617 CCDC85BQ15834 202 aaPredicted RBP20.58■□□□□ 0.88
HDAC4-201ENST00000345617 PPP6R3Q5H9R7 873 aaPredicted RBP20.58■□□□□ 0.88
HDAC4-201ENST00000345617 ADNPQ9H2P0 1102 aa20.58■□□□□ 0.88
HDAC4-201ENST00000345617 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.58■□□□□ 0.884e-7■■■■■ 27.4
HDAC4-201ENST00000345617 GTSE1Q9NYZ3 720 aa20.58■□□□□ 0.88
HDAC4-201ENST00000345617 CLEC11AQ9Y240 323 aa20.58■□□□□ 0.88
HDAC4-201ENST00000345617 ANP32DO95626 131 aa20.58■□□□□ 0.88
HDAC4-201ENST00000345617 UVRAGQ9P2Y5 699 aa20.58■□□□□ 0.88
HDAC4-201ENST00000345617 ST13P50502 369 aaKnown RBP20.57■□□□□ 0.88
HDAC4-201ENST00000345617 DSG1Q02413 1049 aa20.57■□□□□ 0.88
HDAC4-201ENST00000345617 ICA1Q05084 483 aa20.57■□□□□ 0.88
HDAC4-201ENST00000345617 ZNF280CQ8ND82 737 aa20.57■□□□□ 0.88
HDAC4-201ENST00000345617 SLC26A7Q8TE54 656 aa20.57■□□□□ 0.88
HDAC4-201ENST00000345617 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.57■□□□□ 0.88
HDAC4-201ENST00000345617 TRIM63Q969Q1 353 aa20.57■□□□□ 0.88
HDAC4-201ENST00000345617 CDC42BPGQ6DT37 1551 aa20.57■□□□□ 0.88
HDAC4-201ENST00000345617 TFDP2Q14188 446 aa20.57■□□□□ 0.88
HDAC4-201ENST00000345617 FAM47EQ6ZV65 393 aa20.57■□□□□ 0.88
HDAC4-201ENST00000345617 EME1Q96AY2 570 aa20.57■□□□□ 0.88
HDAC4-201ENST00000345617 DMC1Q14565 340 aa20.57■□□□□ 0.88
HDAC4-201ENST00000345617 BLVRAP53004 296 aa20.57■□□□□ 0.88
HDAC4-201ENST00000345617 CERKLQ49MI3 558 aaPredicted RBP20.57■□□□□ 0.88
HDAC4-201ENST00000345617 SGSM3Q96HU1 749 aa20.57■□□□□ 0.88
HDAC4-201ENST00000345617 ASNSD1Q9NWL6 643 aa20.57■□□□□ 0.88
HDAC4-201ENST00000345617 WDR3Q9UNX4 943 aaKnown RBP eCLIP20.57■□□□□ 0.88
HDAC4-201ENST00000345617 USP15Q9Y4E8 981 aaPredicted RBP20.57■□□□□ 0.88
HDAC4-201ENST00000345617 LDHAP00338 332 aaKnown RBP20.56■□□□□ 0.88
HDAC4-201ENST00000345617 SLC9A1P19634 815 aa20.56■□□□□ 0.88
HDAC4-201ENST00000345617 SOX6P35712 828 aa20.56■□□□□ 0.88
HDAC4-201ENST00000345617 PLCG1P19174 1290 aa20.56■□□□□ 0.88
HDAC4-201ENST00000345617 IL13P35225 146 aa20.56■□□□□ 0.88
HDAC4-201ENST00000345617 CEP78Q5JTW2 689 aa20.56■□□□□ 0.88
HDAC4-201ENST00000345617 ELMSAN1Q6PJG2 1045 aa20.56■□□□□ 0.88
HDAC4-201ENST00000345617 EFHBQ8N7U6 833 aa20.56■□□□□ 0.88
HDAC4-201ENST00000345617 PTH1RQ03431 593 aa20.56■□□□□ 0.88
HDAC4-201ENST00000345617 GOLGA8FQ08AF8 430 aa20.56■□□□□ 0.88
HDAC4-201ENST00000345617 GOLGA8DPQ0D2H9 430 aa20.56■□□□□ 0.88
HDAC4-201ENST00000345617 SPATA21Q7Z572 469 aa20.56■□□□□ 0.88
HDAC4-201ENST00000345617 MB21D1Q8N884 522 aa20.56■□□□□ 0.88
HDAC4-201ENST00000345617 ANTXR1Q9H6X2 564 aa20.56■□□□□ 0.88
HDAC4-201ENST00000345617 WBP4O75554 376 aaKnown RBP20.56■□□□□ 0.88
HDAC4-201ENST00000345617 ADD1P35611 737 aaKnown RBP20.56■□□□□ 0.88
HDAC4-201ENST00000345617 GPC5P78333 572 aa20.56■□□□□ 0.88
HDAC4-201ENST00000345617 HIF1AQ16665 826 aa20.56■□□□□ 0.88
HDAC4-201ENST00000345617 RIBC1Q8N443 379 aaPredicted RBP20.56■□□□□ 0.88
HDAC4-201ENST00000345617 GINS4Q9BRT9 223 aa20.56■□□□□ 0.88
HDAC4-201ENST00000345617 ZNF556Q9HAH1 456 aa20.56■□□□□ 0.88
HDAC4-201ENST00000345617 ZSCAN20P17040 1043 aaPredicted RBP20.56■□□□□ 0.88
HDAC4-201ENST00000345617 KIAA1755Q5JYT7 1200 aa20.56■□□□□ 0.88
HDAC4-201ENST00000345617 RAPGEF5Q92565 580 aa20.56■□□□□ 0.88
HDAC4-201ENST00000345617 NDEL1Q9GZM8 345 aa20.56■□□□□ 0.88
HDAC4-201ENST00000345617 TSPOAP1O95153 1857 aa20.56■□□□□ 0.88
HDAC4-201ENST00000345617 ABL1P00519 1130 aa20.56■□□□□ 0.88
HDAC4-201ENST00000345617 CNGA2Q16280 664 aa20.56■□□□□ 0.88
HDAC4-201ENST00000345617 STK36Q9NRP7 1315 aa20.56■□□□□ 0.88
HDAC4-201ENST00000345617 TOMM70O94826 608 aa20.56■□□□□ 0.88
HDAC4-201ENST00000345617 NSUN7Q8NE18 718 aaKnown RBP20.56■□□□□ 0.88
HDAC4-201ENST00000345617 DDI1Q8WTU0 396 aa20.56■□□□□ 0.88
HDAC4-201ENST00000345617 SYNJ2BP-COX16A0A087WUM0 186 aa20.55■□□□□ 0.88
HDAC4-201ENST00000345617 H7C0S8 307 aa20.55■□□□□ 0.88
HDAC4-201ENST00000345617 TOM1O60784 492 aa20.55■□□□□ 0.88
HDAC4-201ENST00000345617 CSTF3Q12996 717 aaKnown RBP20.55■□□□□ 0.88
HDAC4-201ENST00000345617 COX16Q9P0S2 106 aa20.55■□□□□ 0.88
HDAC4-201ENST00000345617 PITPNM2Q9BZ72 1349 aa20.55■□□□□ 0.88
HDAC4-201ENST00000345617 PLEKHG1Q9ULL1 1385 aa20.55■□□□□ 0.88
HDAC4-201ENST00000345617 USP17L12C9JPN9 530 aa20.55■□□□□ 0.88
HDAC4-201ENST00000345617 USP17L21D6R901 530 aa20.55■□□□□ 0.88
HDAC4-201ENST00000345617 LIFRP42702 1097 aa20.55■□□□□ 0.88
HDAC4-201ENST00000345617 SMARCAL1Q9NZC9 954 aa20.55■□□□□ 0.88
HDAC4-201ENST00000345617 CAB39Q9Y376 341 aaPredicted RBP20.55■□□□□ 0.88
HDAC4-201ENST00000345617 RFX7Q2KHR2 1363 aa20.55■□□□□ 0.88
HDAC4-201ENST00000345617 PJA2O43164 708 aa20.55■□□□□ 0.88
HDAC4-201ENST00000345617 CDH16O75309 829 aa20.55■□□□□ 0.88
HDAC4-201ENST00000345617 CHRNA2Q15822 529 aa20.55■□□□□ 0.88
HDAC4-201ENST00000345617 ZMYM1Q5SVZ6 1142 aa20.55■□□□□ 0.88
HDAC4-201ENST00000345617 TFCP2L1Q9NZI6 479 aa20.55■□□□□ 0.88
HDAC4-201ENST00000345617 RNF139Q8WU17 664 aa20.55■□□□□ 0.88
HDAC4-201ENST00000345617 SCFD1Q8WVM8 642 aa20.55■□□□□ 0.88
HDAC4-201ENST00000345617 ANAPC7Q9UJX3 599 aa20.55■□□□□ 0.88
HDAC4-201ENST00000345617 ATP7BP35670 1465 aa20.55■□□□□ 0.88
HDAC4-201ENST00000345617 M0R3G1 203 aa20.55■□□□□ 0.88
HDAC4-201ENST00000345617 KRT14P02533 472 aa20.55■□□□□ 0.88
HDAC4-201ENST00000345617 CCND2P30279 289 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms