RNA–Protein interactions for RNA: ENST00000344404.10

TRIOBP-202, Transcript of TRIO and F-actin binding protein, humanhuman

TSL 2

Gene TRIOBP, Length 7,300 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIOBP-202ENST00000344404 RASSF3Q86WH2 238 aa13.06□□□□□ -0.32
TRIOBP-202ENST00000344404 FAM217BQ9NTX9 383 aaPredicted RBP13.06□□□□□ -0.32
TRIOBP-202ENST00000344404 MAP3K1Q13233 1512 aa13.06□□□□□ -0.32
TRIOBP-202ENST00000344404 GAP43P17677 238 aa13.06□□□□□ -0.32
TRIOBP-202ENST00000344404 PLCG1P19174 1290 aa13.06□□□□□ -0.32
TRIOBP-202ENST00000344404 CCT5P48643 541 aa13.06□□□□□ -0.32
TRIOBP-202ENST00000344404 SLC16A4O15374 487 aa13.05□□□□□ -0.32
TRIOBP-202ENST00000344404 CLCN1P35523 988 aa13.05□□□□□ -0.32
TRIOBP-202ENST00000344404 OR1G1P47890 313 aa13.05□□□□□ -0.32
TRIOBP-202ENST00000344404 TAF1BQ53T94 588 aaPredicted RBP13.05□□□□□ -0.32
TRIOBP-202ENST00000344404 PHF21AQ96BD5 680 aa13.05□□□□□ -0.32
TRIOBP-202ENST00000344404 ATP11BQ9Y2G3 1177 aa13.05□□□□□ -0.32
TRIOBP-202ENST00000344404 M0QYV0 167 aa13.05□□□□□ -0.32
TRIOBP-202ENST00000344404 CHL1O00533 1208 aa13.05□□□□□ -0.32
TRIOBP-202ENST00000344404 PDIA3P30101 505 aaKnown RBP13.05□□□□□ -0.32
TRIOBP-202ENST00000344404 PAPOLAP51003 745 aaKnown RBP13.05□□□□□ -0.32
TRIOBP-202ENST00000344404 TBL3Q12788 808 aaKnown RBP13.05□□□□□ -0.32
TRIOBP-202ENST00000344404 PKN3Q6P5Z2 889 aa13.05□□□□□ -0.32
TRIOBP-202ENST00000344404 ZNF274Q96GC6 653 aaPredicted RBP13.05□□□□□ -0.32
TRIOBP-202ENST00000344404 KLC2Q9H0B6 622 aa13.05□□□□□ -0.32
TRIOBP-202ENST00000344404 IMPDH2P12268 514 aa13.05□□□□□ -0.32
TRIOBP-202ENST00000344404 TCF3P15923 654 aa13.05□□□□□ -0.32
TRIOBP-202ENST00000344404 EPB42P16452 691 aa13.05□□□□□ -0.32
TRIOBP-202ENST00000344404 DHX36Q9H2U1 1008 aaKnown RBP13.05□□□□□ -0.32
TRIOBP-202ENST00000344404 EMILIN3Q9NT22 766 aa13.05□□□□□ -0.32
TRIOBP-202ENST00000344404 SCINQ9Y6U3 715 aa13.05□□□□□ -0.32
TRIOBP-202ENST00000344404 CCNYL1Q8N7R7 359 aa13.05□□□□□ -0.32
TRIOBP-202ENST00000344404 UPF3AQ9H1J1 476 aaKnown RBP13.05□□□□□ -0.32
TRIOBP-202ENST00000344404 GGA3Q9NZ52 723 aa13.05□□□□□ -0.32
TRIOBP-202ENST00000344404 PCDHA6Q9UN73 950 aa13.05□□□□□ -0.32
TRIOBP-202ENST00000344404 PCDHA8Q9Y5H6 950 aa13.05□□□□□ -0.32
TRIOBP-202ENST00000344404 WEE1P30291 646 aa13.05□□□□□ -0.32
TRIOBP-202ENST00000344404 PLEKHM3Q6ZWE6 761 aa13.05□□□□□ -0.32
TRIOBP-202ENST00000344404 OR6P1Q8NGX9 317 aa13.05□□□□□ -0.32
TRIOBP-202ENST00000344404 PPP2R3CQ969Q6 453 aa13.05□□□□□ -0.32
TRIOBP-202ENST00000344404 PDE11AQ9HCR9 933 aa13.05□□□□□ -0.32
TRIOBP-202ENST00000344404 KLF15Q9UIH9 416 aa13.05□□□□□ -0.32
TRIOBP-202ENST00000344404 A6NNZ2 444 aa13.05□□□□□ -0.32
TRIOBP-202ENST00000344404 TUBB8Q3ZCM7 444 aa13.05□□□□□ -0.32
TRIOBP-202ENST00000344404 TMEM270Q6UE05 265 aa13.05□□□□□ -0.32
TRIOBP-202ENST00000344404 TRIM42Q8IWZ5 723 aa13.05□□□□□ -0.32
TRIOBP-202ENST00000344404 DDIASQ8IXT1 998 aa13.05□□□□□ -0.32
TRIOBP-202ENST00000344404 TRIML2Q8N7C3 387 aa13.05□□□□□ -0.32
TRIOBP-202ENST00000344404 RNF146Q9NTX7 359 aa13.05□□□□□ -0.32
TRIOBP-202ENST00000344404 PRDX5P30044 214 aa13.04□□□□□ -0.32
TRIOBP-202ENST00000344404 VEPH1Q14D04 833 aa13.04□□□□□ -0.32
TRIOBP-202ENST00000344404 MAPK6Q16659 721 aa13.04□□□□□ -0.32
TRIOBP-202ENST00000344404 C16orf87Q6PH81 154 aa13.04□□□□□ -0.32
TRIOBP-202ENST00000344404 SAMD7Q7Z3H4 446 aa13.04□□□□□ -0.32
TRIOBP-202ENST00000344404 BEST2Q8NFU1 509 aa13.04□□□□□ -0.32
TRIOBP-202ENST00000344404 BHMT2Q9H2M3 363 aa13.04□□□□□ -0.32
TRIOBP-202ENST00000344404 COPRSQ9NQ92 184 aa13.04□□□□□ -0.32
TRIOBP-202ENST00000344404 KDM6BO15054 1643 aa13.04□□□□□ -0.32
TRIOBP-202ENST00000344404 EIF4E1BA6NMX2 242 aaKnown RBP13.04□□□□□ -0.32
TRIOBP-202ENST00000344404 SIX5Q8N196 739 aa13.04□□□□□ -0.32
TRIOBP-202ENST00000344404 SLC13A1Q9BZW2 595 aa13.04□□□□□ -0.32
TRIOBP-202ENST00000344404 SPDYAQ5MJ70 313 aa13.04□□□□□ -0.32
TRIOBP-202ENST00000344404 CEP70Q8NHQ1 597 aa13.04□□□□□ -0.32
TRIOBP-202ENST00000344404 MLXIPLQ9NP71 852 aa13.04□□□□□ -0.32
TRIOBP-202ENST00000344404 CSE1LP55060 971 aaKnown RBP13.04□□□□□ -0.32
TRIOBP-202ENST00000344404 GABBR1Q9UBS5 961 aa13.04□□□□□ -0.32
TRIOBP-202ENST00000344404 USP17L15C9J2P7 530 aa13.04□□□□□ -0.32
TRIOBP-202ENST00000344404 USP17L13C9JLJ4 530 aa13.04□□□□□ -0.32
TRIOBP-202ENST00000344404 USP17L11C9JVI0 530 aa13.04□□□□□ -0.32
TRIOBP-202ENST00000344404 USP17L18D6R9N7 530 aa13.04□□□□□ -0.32
TRIOBP-202ENST00000344404 USP17L22D6RA61 530 aa13.04□□□□□ -0.32
TRIOBP-202ENST00000344404 USP17L17D6RBQ6 530 aa13.04□□□□□ -0.32
TRIOBP-202ENST00000344404 USP17L19D6RCP7 530 aa13.04□□□□□ -0.32
TRIOBP-202ENST00000344404 USP17L20D6RJB6 530 aa13.04□□□□□ -0.32
TRIOBP-202ENST00000344404 RFX3P48380 749 aa13.04□□□□□ -0.32
TRIOBP-202ENST00000344404 USP17L24Q0WX57 530 aa13.04□□□□□ -0.32
TRIOBP-202ENST00000344404 SPATA1Q5VX52 437 aa13.04□□□□□ -0.32
TRIOBP-202ENST00000344404 GALNT17Q6IS24 598 aa13.04□□□□□ -0.32
TRIOBP-202ENST00000344404 USP17L6PQ6QN14 398 aa13.04□□□□□ -0.32
TRIOBP-202ENST00000344404 TRIM11Q96F44 468 aa13.04□□□□□ -0.32
TRIOBP-202ENST00000344404 KIF12Q96FN5 646 aa13.04□□□□□ -0.32
TRIOBP-202ENST00000344404 SPZ1Q9BXG8 430 aa13.04□□□□□ -0.32
TRIOBP-202ENST00000344404 TXLNGQ9NUQ3 528 aa13.04□□□□□ -0.32
TRIOBP-202ENST00000344404 TMEM161AQ9NX61 479 aa13.04□□□□□ -0.32
TRIOBP-202ENST00000344404 CCL15-CCL14A0A0B4J2E2 113 aa13.04□□□□□ -0.32
TRIOBP-202ENST00000344404 E2F8A0AVK6 867 aa13.04□□□□□ -0.32
TRIOBP-202ENST00000344404 HSPA1AP0DMV8 641 aaKnown RBP13.04□□□□□ -0.32
TRIOBP-202ENST00000344404 HSPA1BP0DMV9 641 aaKnown RBP13.04□□□□□ -0.32
TRIOBP-202ENST00000344404 ERFP50548 548 aa13.04□□□□□ -0.32
TRIOBP-202ENST00000344404 CCL15Q16663 113 aa13.04□□□□□ -0.32
TRIOBP-202ENST00000344404 HSP90AA5PQ58FG0 334 aa13.04□□□□□ -0.32
TRIOBP-202ENST00000344404 TDRD7Q8NHU6 1098 aaKnown RBP13.04□□□□□ -0.32
TRIOBP-202ENST00000344404 FBXO41Q8TF61 875 aa13.04□□□□□ -0.32
TRIOBP-202ENST00000344404 P2RX5Q93086 422 aa13.04□□□□□ -0.32
TRIOBP-202ENST00000344404 CHD1O14646 1710 aa13.04□□□□□ -0.32
TRIOBP-202ENST00000344404 TJP2Q9UDY2 1190 aa13.03□□□□□ -0.32
TRIOBP-202ENST00000344404 NRBP1Q9UHY1 535 aa13.03□□□□□ -0.32
TRIOBP-202ENST00000344404 SOWAHDA6NJG2 315 aa13.03□□□□□ -0.32
TRIOBP-202ENST00000344404 SYTL3Q4VX76 610 aa13.03□□□□□ -0.32
TRIOBP-202ENST00000344404 HS6ST3Q8IZP7 471 aa13.03□□□□□ -0.32
TRIOBP-202ENST00000344404 RAB42Q8N4Z0 105 aa13.03□□□□□ -0.32
TRIOBP-202ENST00000344404 CCDC197Q8NCU1 140 aa13.03□□□□□ -0.32
TRIOBP-202ENST00000344404 ANAPC7Q9UJX3 599 aa13.03□□□□□ -0.32
TRIOBP-202ENST00000344404 ATP9BO43861 1147 aa13.03□□□□□ -0.32
TRIOBP-202ENST00000344404 STAT3P40763 770 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms