RNA–Protein interactions for RNA: ENST00000343139.9

HLA-DQA1-201, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQA1, Length 1,591 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-201ENST00000343139 CDK5RAP3Q96JB5 506 aa14.51□□□□□ -0.09
HLA-DQA1-201ENST00000343139 PNMA5Q96PV4 448 aa14.51□□□□□ -0.09
HLA-DQA1-201ENST00000343139 ZBED2Q9BTP6 218 aa14.51□□□□□ -0.09
HLA-DQA1-201ENST00000343139 SEMA6BQ9H3T3 888 aa14.51□□□□□ -0.09
HLA-DQA1-201ENST00000343139 ELAC1Q9H777 363 aaKnown RBP14.51□□□□□ -0.09
HLA-DQA1-201ENST00000343139 SLC28A3Q9HAS3 691 aa14.51□□□□□ -0.09
HLA-DQA1-201ENST00000343139 DACT1Q9NYF0 836 aa14.51□□□□□ -0.09
HLA-DQA1-201ENST00000343139 CFAP45Q9UL16 551 aa14.51□□□□□ -0.09
HLA-DQA1-201ENST00000343139 A0A087WWV3 80 aa14.51□□□□□ -0.09
HLA-DQA1-201ENST00000343139 DENND3A2RUS2 1198 aa14.51□□□□□ -0.09
HLA-DQA1-201ENST00000343139 C9IYK1 514 aa14.51□□□□□ -0.09
HLA-DQA1-201ENST00000343139 E9PMD0 336 aa14.51□□□□□ -0.09
HLA-DQA1-201ENST00000343139 STAG3L1P0CL83 205 aa14.51□□□□□ -0.09
HLA-DQA1-201ENST00000343139 MARCKSP29966 332 aaPredicted RBP14.51□□□□□ -0.09
HLA-DQA1-201ENST00000343139 GRIN1Q05586 938 aa14.51□□□□□ -0.09
HLA-DQA1-201ENST00000343139 DEFB123Q8N688 67 aa14.51□□□□□ -0.09
HLA-DQA1-201ENST00000343139 RSPH1Q8WYR4 309 aa14.51□□□□□ -0.09
HLA-DQA1-201ENST00000343139 ADAM2Q99965 735 aa14.51□□□□□ -0.09
HLA-DQA1-201ENST00000343139 CSRNP2Q9H175 543 aa14.51□□□□□ -0.09
HLA-DQA1-201ENST00000343139 POLR3FQ9H1D9 316 aaPredicted RBP14.51□□□□□ -0.09
HLA-DQA1-201ENST00000343139 TTYH1Q9H313 450 aaPredicted RBP14.51□□□□□ -0.09
HLA-DQA1-201ENST00000343139 ZNF576Q9H609 170 aa14.51□□□□□ -0.09
HLA-DQA1-201ENST00000343139 C17orf75Q9HAS0 396 aa14.51□□□□□ -0.09
HLA-DQA1-201ENST00000343139 RC3H2Q9HBD1 1191 aaKnown RBP14.51□□□□□ -0.09
HLA-DQA1-201ENST00000343139 KCNG1Q9UIX4 513 aa14.51□□□□□ -0.09
HLA-DQA1-201ENST00000343139 ATP6V1DQ9Y5K8 247 aa14.51□□□□□ -0.09
HLA-DQA1-201ENST00000343139 SPTLC2O15270 562 aa14.5□□□□□ -0.09
HLA-DQA1-201ENST00000343139 MGEA5O60502 916 aa14.5□□□□□ -0.09
HLA-DQA1-201ENST00000343139 SRGAP2CP0DJJ0 459 aa14.5□□□□□ -0.09
HLA-DQA1-201ENST00000343139 GUCY2CP25092 1073 aa14.5□□□□□ -0.09
HLA-DQA1-201ENST00000343139 CAPSQ13938 189 aa14.5□□□□□ -0.09
HLA-DQA1-201ENST00000343139 PPP2R5AQ15172 486 aa14.5□□□□□ -0.09
HLA-DQA1-201ENST00000343139 STK38Q15208 465 aa14.5□□□□□ -0.09
HLA-DQA1-201ENST00000343139 CDCA2Q69YH5 1023 aaPredicted RBP14.5□□□□□ -0.09
HLA-DQA1-201ENST00000343139 C1orf186Q6ZWK4 172 aa14.5□□□□□ -0.09
HLA-DQA1-201ENST00000343139 KCNK18Q7Z418 384 aa14.5□□□□□ -0.09
HLA-DQA1-201ENST00000343139 KCNG4Q8TDN1 519 aa14.5□□□□□ -0.09
HLA-DQA1-201ENST00000343139 ASAP3Q8TDY4 903 aa14.5□□□□□ -0.09
HLA-DQA1-201ENST00000343139 ZNF689Q96CS4 500 aaPredicted RBP14.5□□□□□ -0.09
HLA-DQA1-201ENST00000343139 BMP2KQ9NSY1 1161 aaPredicted RBP14.5□□□□□ -0.09
HLA-DQA1-201ENST00000343139 MTMR10Q9NXD2 777 aa14.5□□□□□ -0.09
HLA-DQA1-201ENST00000343139 A0A0U1RQF3 1178 aa14.49□□□□□ -0.09
HLA-DQA1-201ENST00000343139 DGKIO75912 1065 aa14.49□□□□□ -0.09
HLA-DQA1-201ENST00000343139 CA3P07451 260 aa14.49□□□□□ -0.09
HLA-DQA1-201ENST00000343139 AXLP30530 894 aa14.49□□□□□ -0.09
HLA-DQA1-201ENST00000343139 TXLNAP40222 546 aa14.49□□□□□ -0.09
HLA-DQA1-201ENST00000343139 NAMPTP43490 491 aa14.49□□□□□ -0.09
HLA-DQA1-201ENST00000343139 SLC12A3P55017 1021 aa14.49□□□□□ -0.09
HLA-DQA1-201ENST00000343139 CEBPZQ03701 1054 aaKnown RBP14.49□□□□□ -0.09
HLA-DQA1-201ENST00000343139 FAM102BQ5T8I3 360 aa14.49□□□□□ -0.09
HLA-DQA1-201ENST00000343139 PPP2R2DQ66LE6 453 aa14.49□□□□□ -0.09
HLA-DQA1-201ENST00000343139 RINT1Q6NUQ1 792 aa14.49□□□□□ -0.09
HLA-DQA1-201ENST00000343139 CATSPER4Q7RTX7 472 aa14.49□□□□□ -0.09
HLA-DQA1-201ENST00000343139 ZNF668Q96K58 619 aaPredicted RBP14.49□□□□□ -0.09
HLA-DQA1-201ENST00000343139 PRIMPOLQ96LW4 560 aa14.49□□□□□ -0.09
HLA-DQA1-201ENST00000343139 DRC1Q96MC2 740 aa14.49□□□□□ -0.09
HLA-DQA1-201ENST00000343139 C2orf40Q9H1Z8 148 aa14.49□□□□□ -0.09
HLA-DQA1-201ENST00000343139 NKX2-4Q9H2Z4 354 aa14.49□□□□□ -0.09
HLA-DQA1-201ENST00000343139 AGPAT5Q9NUQ2 364 aa14.49□□□□□ -0.09
HLA-DQA1-201ENST00000343139 TMEM161AQ9NX61 479 aa14.49□□□□□ -0.09
HLA-DQA1-201ENST00000343139 CCDC39Q9UFE4 941 aa14.49□□□□□ -0.09
HLA-DQA1-201ENST00000343139 ZDHHC9Q9Y397 364 aa14.49□□□□□ -0.09
HLA-DQA1-201ENST00000343139 PHLPP2Q6ZVD8 1323 aa14.49□□□□□ -0.09
HLA-DQA1-201ENST00000343139 MICAL3Q7RTP6 2002 aa14.49□□□□□ -0.09
HLA-DQA1-201ENST00000343139 EVPLQ92817 2033 aa14.49□□□□□ -0.09
HLA-DQA1-201ENST00000343139 EOMESO95936 686 aa14.48□□□□□ -0.09
HLA-DQA1-201ENST00000343139 PLA2G4BP0C869 781 aa14.48□□□□□ -0.09
HLA-DQA1-201ENST00000343139 SKIP12755 728 aa14.48□□□□□ -0.09
HLA-DQA1-201ENST00000343139 MYOGP15173 224 aa14.48□□□□□ -0.09
HLA-DQA1-201ENST00000343139 TMCO2Q7Z6W1 182 aaPredicted RBP14.48□□□□□ -0.09
HLA-DQA1-201ENST00000343139 CCDC51Q96ER9 411 aa14.48□□□□□ -0.09
HLA-DQA1-201ENST00000343139 IFT74Q96LB3 600 aa14.48□□□□□ -0.09
HLA-DQA1-201ENST00000343139 YME1L1Q96TA2 773 aa14.48□□□□□ -0.09
HLA-DQA1-201ENST00000343139 MINDY3Q9H8M7 445 aa14.48□□□□□ -0.09
HLA-DQA1-201ENST00000343139 GPRC5CQ9NQ84 441 aa14.48□□□□□ -0.09
HLA-DQA1-201ENST00000343139 TFIP11Q9UBB9 837 aaKnown RBP14.48□□□□□ -0.09
HLA-DQA1-201ENST00000343139 STK17AQ9UEE5 414 aa14.48□□□□□ -0.09
HLA-DQA1-201ENST00000343139 PCDHB7Q9Y5E2 793 aa14.48□□□□□ -0.09
HLA-DQA1-201ENST00000343139 HOXA2O43364 376 aa14.47□□□□□ -0.09
HLA-DQA1-201ENST00000343139 ZNF623O75123 536 aa14.47□□□□□ -0.09
HLA-DQA1-201ENST00000343139 PLCG1P19174 1290 aa14.47□□□□□ -0.09
HLA-DQA1-201ENST00000343139 HOXA11P31270 313 aaPredicted RBP14.47□□□□□ -0.09
HLA-DQA1-201ENST00000343139 DDIT3P35638 169 aa14.47□□□□□ -0.09
HLA-DQA1-201ENST00000343139 RAB27AP51159 221 aa14.47□□□□□ -0.09
HLA-DQA1-201ENST00000343139 EFNA5P52803 228 aa14.47□□□□□ -0.09
HLA-DQA1-201ENST00000343139 TAP1Q03518 808 aa14.47□□□□□ -0.09
HLA-DQA1-201ENST00000343139 MBTD1Q05BQ5 628 aa14.47□□□□□ -0.09
HLA-DQA1-201ENST00000343139 NCBP1Q09161 790 aaKnown RBP14.47□□□□□ -0.09
HLA-DQA1-201ENST00000343139 ZRSR1Q15695 479 aaKnown RBP14.47□□□□□ -0.09
HLA-DQA1-201ENST00000343139 FAM187BQ17R55 369 aa14.47□□□□□ -0.09
HLA-DQA1-201ENST00000343139 PPP4R3CPQ6ZMV5 832 aa14.47□□□□□ -0.09
HLA-DQA1-201ENST00000343139 CMTR2Q8IYT2 770 aaKnown RBP14.47□□□□□ -0.09
HLA-DQA1-201ENST00000343139 RAD54LQ92698 747 aa14.47□□□□□ -0.09
HLA-DQA1-201ENST00000343139 SYMPKQ92797 1274 aaKnown RBP14.47□□□□□ -0.09
HLA-DQA1-201ENST00000343139 KCNN1Q92952 543 aa14.47□□□□□ -0.09
HLA-DQA1-201ENST00000343139 EPSTI1Q96J88 318 aa14.47□□□□□ -0.09
HLA-DQA1-201ENST00000343139 SAMD11Q96NU1 681 aa14.47□□□□□ -0.09
HLA-DQA1-201ENST00000343139 CLIC6Q96NY7 704 aa14.47□□□□□ -0.09
HLA-DQA1-201ENST00000343139 BLOC1S4Q9NUP1 217 aa14.47□□□□□ -0.09
HLA-DQA1-201ENST00000343139 RCOR1Q9UKL0 485 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms