RNA–Protein interactions for RNA: ENST00000342343.8

PDE8B-204, Transcript of phosphodiesterase 8B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDE8B, Length 2,677 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE8B-204ENST00000342343 PLS1Q14651 629 aa17.09■□□□□ 0.33
PDE8B-204ENST00000342343 SPDYE2Q495Y8 402 aa17.09■□□□□ 0.33
PDE8B-204ENST00000342343 OGFOD1Q8N543 542 aa17.09■□□□□ 0.33
PDE8B-204ENST00000342343 C3orf20Q8ND61 904 aa17.09■□□□□ 0.33
PDE8B-204ENST00000342343 LRRC45Q96CN5 670 aa17.09■□□□□ 0.33
PDE8B-204ENST00000342343 CD248Q9HCU0 757 aa17.09■□□□□ 0.33
PDE8B-204ENST00000342343 GCNT4Q9P109 453 aa17.09■□□□□ 0.33
PDE8B-204ENST00000342343 CUL1Q13616 776 aa17.08■□□□□ 0.33
PDE8B-204ENST00000342343 ZKSCAN4Q969J2 545 aaPredicted RBP17.08■□□□□ 0.33
PDE8B-204ENST00000342343 BORCS6Q96GS4 357 aa17.08■□□□□ 0.33
PDE8B-204ENST00000342343 SH2D3AQ9BRG2 576 aa17.08■□□□□ 0.33
PDE8B-204ENST00000342343 TACO1Q9BSH4 297 aaKnown RBP17.08■□□□□ 0.33
PDE8B-204ENST00000342343 TUFT1Q9NNX1 390 aa17.08■□□□□ 0.33
PDE8B-204ENST00000342343 OLFML3Q9NRN5 406 aa17.08■□□□□ 0.33
PDE8B-204ENST00000342343 COL20A1Q9P218 1284 aa17.08■□□□□ 0.33
PDE8B-204ENST00000342343 RPS6KA1Q15418 735 aa17.08■□□□□ 0.32
PDE8B-204ENST00000342343 NBPF9Q3BBW0 867 aa17.08■□□□□ 0.32
PDE8B-204ENST00000342343 RUFY4Q6ZNE9 571 aa17.08■□□□□ 0.32
PDE8B-204ENST00000342343 CHURC1Q8WUH1 139 aa17.08■□□□□ 0.32
PDE8B-204ENST00000342343 BCS1LQ9Y276 419 aa17.08■□□□□ 0.32
PDE8B-204ENST00000342343 COL2A1P02458 1487 aaPredicted RBP17.08■□□□□ 0.32
PDE8B-204ENST00000342343 CES2O00748 559 aa17.07■□□□□ 0.32
PDE8B-204ENST00000342343 KCNK3O14649 394 aa17.07■□□□□ 0.32
PDE8B-204ENST00000342343 CTNNA1P35221 906 aaKnown RBP17.07■□□□□ 0.32
PDE8B-204ENST00000342343 CAP2P40123 477 aa17.07■□□□□ 0.32
PDE8B-204ENST00000342343 ERVK-9P63128 1117 aa17.07■□□□□ 0.32
PDE8B-204ENST00000342343 BIRC3Q13489 604 aa17.07■□□□□ 0.32
PDE8B-204ENST00000342343 ODF2Q5BJF6 829 aa17.07■□□□□ 0.32
PDE8B-204ENST00000342343 TRMT1LQ7Z2T5 733 aaKnown RBP17.07■□□□□ 0.32
PDE8B-204ENST00000342343 IL31RAQ8NI17 732 aa17.07■□□□□ 0.32
PDE8B-204ENST00000342343 CCDC114Q96M63 670 aa17.07■□□□□ 0.32
PDE8B-204ENST00000342343 ACTR5Q9H9F9 607 aaPredicted RBP17.07■□□□□ 0.32
PDE8B-204ENST00000342343 PARVGQ9HBI0 331 aa17.07■□□□□ 0.32
PDE8B-204ENST00000342343 GOLGA6L7A0A1B0GV03 622 aa17.07■□□□□ 0.32
PDE8B-204ENST00000342343 H0YGN5 161 aa17.07■□□□□ 0.32
PDE8B-204ENST00000342343 ITGB5P18084 799 aa17.07■□□□□ 0.32
PDE8B-204ENST00000342343 RPL13P26373 211 aaKnown RBP17.07■□□□□ 0.32
PDE8B-204ENST00000342343 CYP2J2P51589 502 aa17.07■□□□□ 0.32
PDE8B-204ENST00000342343 LXNQ9BS40 222 aa17.07■□□□□ 0.32
PDE8B-204ENST00000342343 SLC40A1Q9NP59 571 aa17.07■□□□□ 0.32
PDE8B-204ENST00000342343 DDX20Q9UHI6 824 aaKnown RBP17.07■□□□□ 0.32
PDE8B-204ENST00000342343 MRPL11Q9Y3B7 192 aaKnown RBP17.07■□□□□ 0.32
PDE8B-204ENST00000342343 NFS1Q9Y697 457 aa17.07■□□□□ 0.32
PDE8B-204ENST00000342343 RBBP6Q7Z6E9 1792 aaKnown RBP17.07■□□□□ 0.32
PDE8B-204ENST00000342343 NFIBO00712 420 aa17.06■□□□□ 0.32
PDE8B-204ENST00000342343 TRAPPC3O43617 180 aa17.06■□□□□ 0.32
PDE8B-204ENST00000342343 GRIPAP1Q4V328 841 aa17.06■□□□□ 0.32
PDE8B-204ENST00000342343 ZNF720Q7Z2F6 126 aa17.06■□□□□ 0.32
PDE8B-204ENST00000342343 FAM186BQ8IYM0 893 aa17.06■□□□□ 0.32
PDE8B-204ENST00000342343 TTLL6Q8N841 843 aa17.06■□□□□ 0.32
PDE8B-204ENST00000342343 RDH13Q8NBN7 331 aa17.06■□□□□ 0.32
PDE8B-204ENST00000342343 SLC12A6Q9UHW9 1150 aa17.06■□□□□ 0.32
PDE8B-204ENST00000342343 NAGPAQ9UK23 515 aa17.06■□□□□ 0.32
PDE8B-204ENST00000342343 STK24Q9Y6E0 443 aa17.06■□□□□ 0.32
PDE8B-204ENST00000342343 IPO5O00410 1097 aaKnown RBP17.06■□□□□ 0.32
PDE8B-204ENST00000342343 TRIM49P0CI25 452 aa17.06■□□□□ 0.32
PDE8B-204ENST00000342343 TRIM49CP0CI26 452 aa17.06■□□□□ 0.32
PDE8B-204ENST00000342343 GAP43P17677 238 aa17.06■□□□□ 0.32
PDE8B-204ENST00000342343 ECHS1P30084 290 aa17.06■□□□□ 0.32
PDE8B-204ENST00000342343 ZNF772Q68DY9 489 aaPredicted RBP17.06■□□□□ 0.32
PDE8B-204ENST00000342343 OR2W6PQ8NHA6 318 aa17.06■□□□□ 0.32
PDE8B-204ENST00000342343 PBKQ96KB5 322 aa17.06■□□□□ 0.32
PDE8B-204ENST00000342343 WDR11Q9BZH6 1224 aa17.06■□□□□ 0.32
PDE8B-204ENST00000342343 BCCIPQ9P287 314 aaKnown RBP eCLIP17.06■□□□□ 0.32
PDE8B-204ENST00000342343 SYNPO2Q9UMS6 1093 aa17.06■□□□□ 0.32
PDE8B-204ENST00000342343 MYH11P35749 1972 aa17.06■□□□□ 0.32
PDE8B-204ENST00000342343 TISP43B9A030 160 aa17.05■□□□□ 0.32
PDE8B-204ENST00000342343 GFPT2O94808 682 aa17.05■□□□□ 0.32
PDE8B-204ENST00000342343 CBWD6Q4V339 395 aa17.05■□□□□ 0.32
PDE8B-204ENST00000342343 CBWD3Q5JTY5 395 aa17.05■□□□□ 0.32
PDE8B-204ENST00000342343 CBWD5Q5RIA9 395 aa17.05■□□□□ 0.32
PDE8B-204ENST00000342343 ODR4Q5SWX8 454 aa17.05■□□□□ 0.32
PDE8B-204ENST00000342343 ALKBH5Q6P6C2 394 aaKnown RBP17.05■□□□□ 0.32
PDE8B-204ENST00000342343 FAM178BQ8IXR5 827 aa17.05■□□□□ 0.32
PDE8B-204ENST00000342343 CPXCR1Q8N123 301 aa17.05■□□□□ 0.32
PDE8B-204ENST00000342343 GIMAP7Q8NHV1 300 aa17.05■□□□□ 0.32
PDE8B-204ENST00000342343 SCFD2Q8WU76 684 aa17.05■□□□□ 0.32
PDE8B-204ENST00000342343 METTL14Q9HCE5 456 aaKnown RBP17.05■□□□□ 0.32
PDE8B-204ENST00000342343 ZNF536O15090 1300 aa17.05■□□□□ 0.32
PDE8B-204ENST00000342343 SLC16A3O15427 465 aaKnown RBP17.05■□□□□ 0.32
PDE8B-204ENST00000342343 JAM2P57087 298 aa17.05■□□□□ 0.32
PDE8B-204ENST00000342343 ZNF844Q08AG5 666 aa17.05■□□□□ 0.32
PDE8B-204ENST00000342343 UAP1Q16222 522 aaPredicted RBP17.05■□□□□ 0.32
PDE8B-204ENST00000342343 DAW1Q8N136 415 aa17.05■□□□□ 0.32
PDE8B-204ENST00000342343 ZNF341Q9BYN7 854 aa17.05■□□□□ 0.32
PDE8B-204ENST00000342343 HOMER2Q9NSB8 354 aa17.05■□□□□ 0.32
PDE8B-204ENST00000342343 CEP104O60308 925 aa17.04■□□□□ 0.32
PDE8B-204ENST00000342343 DPEP1P16444 411 aa17.04■□□□□ 0.32
PDE8B-204ENST00000342343 KCNA3P22001 575 aa17.04■□□□□ 0.32
PDE8B-204ENST00000342343 TMOD1P28289 359 aa17.04■□□□□ 0.32
PDE8B-204ENST00000342343 NEDD9Q14511 834 aa17.04■□□□□ 0.32
PDE8B-204ENST00000342343 B3GNT9Q6UX72 402 aa17.04■□□□□ 0.32
PDE8B-204ENST00000342343 ACTRT1Q8TDG2 376 aa17.04■□□□□ 0.32
PDE8B-204ENST00000342343 NACC1Q96RE7 527 aa17.04■□□□□ 0.32
PDE8B-204ENST00000342343 CCPG1Q9ULG6 757 aa17.04■□□□□ 0.32
PDE8B-204ENST00000342343 FRMPD4Q14CM0 1322 aa17.04■□□□□ 0.32
PDE8B-204ENST00000342343 PSME4Q14997 1843 aa17.04■□□□□ 0.32
PDE8B-204ENST00000342343 TMEM150BA6NC51 233 aa17.04■□□□□ 0.32
PDE8B-204ENST00000342343 BTNL10A8MVZ5 291 aa17.04■□□□□ 0.32
PDE8B-204ENST00000342343 SART1O43290 800 aaKnown RBP17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms