RNA–Protein interactions for RNA: ENST00000342203.7

SSX2IP-201, Transcript of SSX family member 2 interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX2IP, Length 5,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-201ENST00000342203 SMIM22K7EJ46 135 aa13.42□□□□□ -0.26
SSX2IP-201ENST00000342203 EPHB6O15197 1021 aa13.42□□□□□ -0.26
SSX2IP-201ENST00000342203 HOXA13P31271 388 aaPredicted RBP13.42□□□□□ -0.26
SSX2IP-201ENST00000342203 CDK8P49336 464 aa13.42□□□□□ -0.26
SSX2IP-201ENST00000342203 CUL3Q13618 768 aa13.42□□□□□ -0.26
SSX2IP-201ENST00000342203 WDR78Q5VTH9 848 aa13.42□□□□□ -0.26
SSX2IP-201ENST00000342203 C1orf146Q5VVC0 180 aa13.42□□□□□ -0.26
SSX2IP-201ENST00000342203 SH3RF3Q8TEJ3 882 aaPredicted RBP13.42□□□□□ -0.26
SSX2IP-201ENST00000342203 DUSP9Q99956 384 aaKnown RBP13.42□□□□□ -0.26
SSX2IP-201ENST00000342203 FAM129AQ9BZQ8 928 aa13.42□□□□□ -0.26
SSX2IP-201ENST00000342203 PABPC3Q9H361 631 aaKnown RBP13.42□□□□□ -0.26
SSX2IP-201ENST00000342203 SEMA4AQ9H3S1 761 aa13.42□□□□□ -0.26
SSX2IP-201ENST00000342203 ANGPTL2Q9UKU9 493 aa13.42□□□□□ -0.26
SSX2IP-201ENST00000342203 AP1G2O75843 785 aa13.42□□□□□ -0.26
SSX2IP-201ENST00000342203 PYROXD1Q8WU10 500 aa13.42□□□□□ -0.26
SSX2IP-201ENST00000342203 NVLO15381 856 aaKnown RBP13.42□□□□□ -0.26
SSX2IP-201ENST00000342203 TRAPPC3O43617 180 aa13.42□□□□□ -0.26
SSX2IP-201ENST00000342203 SORBS3O60504 671 aa13.42□□□□□ -0.26
SSX2IP-201ENST00000342203 ARL1P40616 181 aaPredicted RBP13.42□□□□□ -0.26
SSX2IP-201ENST00000342203 MSL3Q8N5Y2 521 aaKnown RBP13.42□□□□□ -0.26
SSX2IP-201ENST00000342203 NAF1Q96HR8 494 aaKnown RBP13.42□□□□□ -0.26
SSX2IP-201ENST00000342203 KLF6Q99612 283 aaPredicted RBP13.42□□□□□ -0.26
SSX2IP-201ENST00000342203 USP40Q9NVE5 1235 aa13.42□□□□□ -0.26
SSX2IP-201ENST00000342203 ZC3H13Q5T200 1668 aaKnown RBP13.42□□□□□ -0.26
SSX2IP-201ENST00000342203 CLDN3O15551 220 aa13.42□□□□□ -0.26
SSX2IP-201ENST00000342203 ELF3P78545 371 aaPredicted RBP13.42□□□□□ -0.26
SSX2IP-201ENST00000342203 TRAF1Q13077 416 aa13.42□□□□□ -0.26
SSX2IP-201ENST00000342203 DHX34Q14147 1143 aaKnown RBP13.42□□□□□ -0.26
SSX2IP-201ENST00000342203 KIF22Q14807 665 aa13.42□□□□□ -0.26
SSX2IP-201ENST00000342203 PKN1Q16512 942 aa13.42□□□□□ -0.26
SSX2IP-201ENST00000342203 AGAP11Q8TF27 550 aa13.42□□□□□ -0.26
SSX2IP-201ENST00000342203 JDP2Q8WYK2 163 aa13.42□□□□□ -0.26
SSX2IP-201ENST00000342203 CENPKQ9BS16 269 aa13.42□□□□□ -0.26
SSX2IP-201ENST00000342203 UBN1Q9NPG3 1134 aa13.42□□□□□ -0.26
SSX2IP-201ENST00000342203 ABCF3Q9NUQ8 709 aa13.42□□□□□ -0.26
SSX2IP-201ENST00000342203 ATMINO43313 823 aaPredicted RBP13.42□□□□□ -0.26
SSX2IP-201ENST00000342203 CPA2P48052 419 aa13.42□□□□□ -0.26
SSX2IP-201ENST00000342203 SLFN13Q68D06 897 aa13.42□□□□□ -0.26
SSX2IP-201ENST00000342203 NXNQ6DKJ4 435 aa13.42□□□□□ -0.26
SSX2IP-201ENST00000342203 PPP4R3CPQ6ZMV5 832 aa13.42□□□□□ -0.26
SSX2IP-201ENST00000342203 FBXO11Q86XK2 927 aa13.42□□□□□ -0.26
SSX2IP-201ENST00000342203 NUF2Q9BZD4 464 aa13.42□□□□□ -0.26
SSX2IP-201ENST00000342203 PARVGQ9HBI0 331 aa13.42□□□□□ -0.26
SSX2IP-201ENST00000342203 OVOS2A0A0G2JMS6 1433 aa13.42□□□□□ -0.26
SSX2IP-201ENST00000342203 MFAP3P55082 362 aa13.41□□□□□ -0.26
SSX2IP-201ENST00000342203 ERFEQ4G0M1 354 aa13.41□□□□□ -0.26
SSX2IP-201ENST00000342203 OSGEPQ9NPF4 335 aa13.41□□□□□ -0.26
SSX2IP-201ENST00000342203 ZFATQ9P243 1243 aa13.41□□□□□ -0.26
SSX2IP-201ENST00000342203 KIAA1210Q9ULL0 1709 aa13.41□□□□□ -0.26
SSX2IP-201ENST00000342203 NCAPD2Q15021 1401 aa13.41□□□□□ -0.26
SSX2IP-201ENST00000342203 TOM1L1O75674 476 aa13.41□□□□□ -0.26
SSX2IP-201ENST00000342203 ZCCHC18P0CG32 403 aa13.41□□□□□ -0.26
SSX2IP-201ENST00000342203 ALDH5A1P51649 535 aaPredicted RBP13.41□□□□□ -0.26
SSX2IP-201ENST00000342203 QPCTQ16769 361 aa13.41□□□□□ -0.26
SSX2IP-201ENST00000342203 ACCSLQ4AC99 568 aa13.41□□□□□ -0.26
SSX2IP-201ENST00000342203 MIER3Q7Z3K6 550 aa13.41□□□□□ -0.26
SSX2IP-201ENST00000342203 TPCN2Q8NHX9 752 aa13.41□□□□□ -0.26
SSX2IP-201ENST00000342203 ZNF564Q8TBZ8 553 aaPredicted RBP13.41□□□□□ -0.26
SSX2IP-201ENST00000342203 CNKSR2Q8WXI2 1034 aa13.41□□□□□ -0.26
SSX2IP-201ENST00000342203 NUP85Q9BW27 656 aa13.41□□□□□ -0.26
SSX2IP-201ENST00000342203 PAPOLBQ9NRJ5 636 aaKnown RBP13.41□□□□□ -0.26
SSX2IP-201ENST00000342203 EXOC7Q9UPT5 735 aa13.41□□□□□ -0.26
SSX2IP-201ENST00000342203 FAM205AQ6ZU69 1335 aa13.41□□□□□ -0.26
SSX2IP-201ENST00000342203 WNT7AO00755 349 aa13.41□□□□□ -0.26
SSX2IP-201ENST00000342203 ARFIP2P53365 341 aa13.41□□□□□ -0.26
SSX2IP-201ENST00000342203 TPD52P55327 224 aaPredicted RBP13.41□□□□□ -0.26
SSX2IP-201ENST00000342203 LRRC43Q8N309 656 aa13.41□□□□□ -0.26
SSX2IP-201ENST00000342203 C18orf8Q96DM3 657 aa13.41□□□□□ -0.26
SSX2IP-201ENST00000342203 FERMT1Q9BQL6 677 aa13.41□□□□□ -0.26
SSX2IP-201ENST00000342203 GGA1Q9UJY5 639 aa13.41□□□□□ -0.26
SSX2IP-201ENST00000342203 ALG6Q9Y672 507 aa13.41□□□□□ -0.26
SSX2IP-201ENST00000342203 PNPLA7Q6ZV29 1317 aa13.41□□□□□ -0.26
SSX2IP-201ENST00000342203 NEXMIFQ5QGS0 1516 aa13.41□□□□□ -0.26
SSX2IP-201ENST00000342203 FAM237AA0A1B0GTK4 181 aa13.41□□□□□ -0.26
SSX2IP-201ENST00000342203 UPP2O95045 317 aa13.41□□□□□ -0.26
SSX2IP-201ENST00000342203 CPP00450 1065 aa13.41□□□□□ -0.26
SSX2IP-201ENST00000342203 VEGFAP15692 232 aaPredicted RBP13.41□□□□□ -0.26
SSX2IP-201ENST00000342203 CNGA1P29973 690 aa13.41□□□□□ -0.26
SSX2IP-201ENST00000342203 CEP95Q96GE4 821 aa13.41□□□□□ -0.26
SSX2IP-201ENST00000342203 KDM4CQ9H3R0 1056 aa13.41□□□□□ -0.26
SSX2IP-201ENST00000342203 METTL5Q9NRN9 209 aaKnown RBP13.41□□□□□ -0.26
SSX2IP-201ENST00000342203 VWDEQ8N2E2 1590 aa13.4□□□□□ -0.26
SSX2IP-201ENST00000342203 F8VZ95 297 aa13.4□□□□□ -0.26
SSX2IP-201ENST00000342203 KRT1P04264 644 aa13.4□□□□□ -0.26
SSX2IP-201ENST00000342203 TMPRSS15P98073 1019 aa13.4□□□□□ -0.26
SSX2IP-201ENST00000342203 KCNMA1Q12791 1236 aa13.4□□□□□ -0.26
SSX2IP-201ENST00000342203 POMGNT1Q8WZA1 660 aa13.4□□□□□ -0.26
SSX2IP-201ENST00000342203 CYP4F11Q9HBI6 524 aa13.4□□□□□ -0.26
SSX2IP-201ENST00000342203 KBTBD4Q9NVX7 518 aa13.4□□□□□ -0.26
SSX2IP-201ENST00000342203 LMNAP02545 664 aaKnown RBP13.4□□□□□ -0.26
SSX2IP-201ENST00000342203 KCNJ2P63252 427 aa13.4□□□□□ -0.26
SSX2IP-201ENST00000342203 KDSRQ06136 332 aa13.4□□□□□ -0.26
SSX2IP-201ENST00000342203 ANLNQ9NQW6 1124 aa13.4□□□□□ -0.26
SSX2IP-201ENST00000342203 CFLARO15519 480 aa13.4□□□□□ -0.26
SSX2IP-201ENST00000342203 ITGB3BPQ13352 177 aaPredicted RBP13.4□□□□□ -0.26
SSX2IP-201ENST00000342203 SCYL2Q6P3W7 929 aa13.4□□□□□ -0.26
SSX2IP-201ENST00000342203 PASD1Q8IV76 773 aa13.4□□□□□ -0.26
SSX2IP-201ENST00000342203 MORC4Q8TE76 937 aa13.4□□□□□ -0.26
SSX2IP-201ENST00000342203 PPP4R1Q8TF05 950 aa13.4□□□□□ -0.26
SSX2IP-201ENST00000342203 GRM4Q14833 912 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms