RNA–Protein interactions for RNA: ENST00000342075.8

PMS1-201, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2

Gene PMS1, Length 3,012 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-201ENST00000342075 SMTNL1A8MU46 457 aa15.29■□□□□ 0.04
PMS1-201ENST00000342075 KNOP1Q1ED39 458 aaKnown RBP15.29■□□□□ 0.04
PMS1-201ENST00000342075 LHX8Q68G74 356 aa15.29■□□□□ 0.04
PMS1-201ENST00000342075 MTHFD1LQ6UB35 978 aa15.29■□□□□ 0.04
PMS1-201ENST00000342075 SLAIN1Q8ND83 568 aa15.29■□□□□ 0.04
PMS1-201ENST00000342075 ZNF507Q8TCN5 953 aa15.29■□□□□ 0.04
PMS1-201ENST00000342075 KIFAP3Q92845 792 aa15.29■□□□□ 0.04
PMS1-201ENST00000342075 IFNKQ9P0W0 207 aa15.29■□□□□ 0.04
PMS1-201ENST00000342075 NRBP1Q9UHY1 535 aa15.29■□□□□ 0.04
PMS1-201ENST00000342075 KIAA0100Q14667 2235 aaKnown RBP15.29■□□□□ 0.04
PMS1-201ENST00000342075 IGKV6-21A0A0C4DH24 114 aa15.29■□□□□ 0.04
PMS1-201ENST00000342075 TREHO43280 583 aa15.29■□□□□ 0.04
PMS1-201ENST00000342075 GNRH1P01148 92 aa15.29■□□□□ 0.04
PMS1-201ENST00000342075 RFC5P40937 340 aa15.29■□□□□ 0.04
PMS1-201ENST00000342075 NCKAP1LP55160 1127 aa15.29■□□□□ 0.04
PMS1-201ENST00000342075 LAMTOR4Q0VGL1 99 aa15.29■□□□□ 0.04
PMS1-201ENST00000342075 CDKAL1Q5VV42 579 aa15.29■□□□□ 0.04
PMS1-201ENST00000342075 TRIM5Q9C035 493 aa15.29■□□□□ 0.04
PMS1-201ENST00000342075 SUCLA2Q9P2R7 463 aaPredicted RBP15.29■□□□□ 0.04
PMS1-201ENST00000342075 Q9Y3F1 56 aa15.29■□□□□ 0.04
PMS1-201ENST00000342075 COBLL1Q53SF7 1204 aa15.28■□□□□ 0.04
PMS1-201ENST00000342075 LRRC55Q6ZSA7 311 aa15.28■□□□□ 0.04
PMS1-201ENST00000342075 UPF3AQ9H1J1 476 aaKnown RBP15.28■□□□□ 0.04
PMS1-201ENST00000342075 GINS2Q9Y248 185 aa15.28■□□□□ 0.04
PMS1-201ENST00000342075 HAS3O00219 553 aa15.28■□□□□ 0.04
PMS1-201ENST00000342075 CASP4P49662 377 aa15.28■□□□□ 0.04
PMS1-201ENST00000342075 FANCCQ00597 558 aa15.28■□□□□ 0.04
PMS1-201ENST00000342075 RNF149Q8NC42 400 aa15.28■□□□□ 0.04
PMS1-201ENST00000342075 XPO4Q9C0E2 1151 aaKnown RBP15.28■□□□□ 0.04
PMS1-201ENST00000342075 PCIF1Q9H4Z3 704 aa15.28■□□□□ 0.04
PMS1-201ENST00000342075 MINDY3Q9H8M7 445 aa15.28■□□□□ 0.04
PMS1-201ENST00000342075 INTS13Q9NVM9 706 aa15.28■□□□□ 0.04
PMS1-201ENST00000342075 SEL1LQ9UBV2 794 aa15.28■□□□□ 0.04
PMS1-201ENST00000342075 ANKRD63C9JTQ0 380 aa15.27■□□□□ 0.04
PMS1-201ENST00000342075 TULP1O00294 542 aaPredicted RBP15.27■□□□□ 0.04
PMS1-201ENST00000342075 HSPA8P11142 646 aaKnown RBP15.27■□□□□ 0.04
PMS1-201ENST00000342075 NBPF20Q3BBV1 942 aa15.27■□□□□ 0.04
PMS1-201ENST00000342075 CCSAPQ6IQ19 270 aaPredicted RBP15.27■□□□□ 0.04
PMS1-201ENST00000342075 APTXQ7Z2E3 356 aaKnown RBP15.27■□□□□ 0.04
PMS1-201ENST00000342075 NOC3LQ8WTT2 800 aaKnown RBP15.27■□□□□ 0.04
PMS1-201ENST00000342075 HMX1Q9NP08 348 aaPredicted RBP15.27■□□□□ 0.04
PMS1-201ENST00000342075 TAB2Q9NYJ8 693 aa15.27■□□□□ 0.04
PMS1-201ENST00000342075 AKT3Q9Y243 479 aa15.27■□□□□ 0.04
PMS1-201ENST00000342075 GRIN2DO15399 1336 aa15.27■□□□□ 0.04
PMS1-201ENST00000342075 IQCF3P0C7M6 154 aa15.27■□□□□ 0.04
PMS1-201ENST00000342075 MAPTP10636 758 aaKnown RBP15.27■□□□□ 0.04
PMS1-201ENST00000342075 CDK11BP21127 795 aaKnown RBP15.27■□□□□ 0.04
PMS1-201ENST00000342075 BMT2Q1RMZ1 405 aa15.27■□□□□ 0.04
PMS1-201ENST00000342075 UVSSAQ2YD98 709 aa15.27■□□□□ 0.04
PMS1-201ENST00000342075 SLC9C1Q4G0N8 1177 aa15.27■□□□□ 0.04
PMS1-201ENST00000342075 FAM47CQ5HY64 1035 aa15.27■□□□□ 0.04
PMS1-201ENST00000342075 ZNF484Q5JVG2 852 aa15.27■□□□□ 0.04
PMS1-201ENST00000342075 NFRKBQ6P4R8 1299 aa15.27■□□□□ 0.04
PMS1-201ENST00000342075 CDR2LQ86X02 465 aaPredicted RBP15.27■□□□□ 0.04
PMS1-201ENST00000342075 SPC24Q8NBT2 197 aa15.27■□□□□ 0.04
PMS1-201ENST00000342075 CBWD1Q9BRT8 395 aa15.27■□□□□ 0.04
PMS1-201ENST00000342075 KCNJ18B7U540 433 aa15.27■□□□□ 0.03
PMS1-201ENST00000342075 KCNJ12Q14500 433 aa15.27■□□□□ 0.03
PMS1-201ENST00000342075 BRDTQ58F21 947 aaPredicted RBP15.27■□□□□ 0.03
PMS1-201ENST00000342075 SLC39A4Q6P5W5 647 aa15.27■□□□□ 0.03
PMS1-201ENST00000342075 SYCP3Q8IZU3 236 aa15.27■□□□□ 0.03
PMS1-201ENST00000342075 KLHDC9Q8NEP7 349 aa15.27■□□□□ 0.03
PMS1-201ENST00000342075 WNT8BQ93098 351 aa15.27■□□□□ 0.03
PMS1-201ENST00000342075 IFT74Q96LB3 600 aa15.27■□□□□ 0.03
PMS1-201ENST00000342075 CDHR5Q9HBB8 845 aa15.27■□□□□ 0.03
PMS1-201ENST00000342075 PCDH10Q9P2E7 1040 aa15.27■□□□□ 0.03
PMS1-201ENST00000342075 TBX20Q9UMR3 447 aa15.27■□□□□ 0.03
PMS1-201ENST00000342075 SERPINC1P01008 464 aa15.26■□□□□ 0.03
PMS1-201ENST00000342075 NR2F2P24468 414 aa15.26■□□□□ 0.03
PMS1-201ENST00000342075 CYP2J2P51589 502 aa15.26■□□□□ 0.03
PMS1-201ENST00000342075 GTF2BQ00403 316 aa15.26■□□□□ 0.03
PMS1-201ENST00000342075 KRT31Q15323 416 aa15.26■□□□□ 0.03
PMS1-201ENST00000342075 LINC01465Q8N7H1 131 aa15.26■□□□□ 0.03
PMS1-201ENST00000342075 PSPC1Q8WXF1 523 aaKnown RBP15.26■□□□□ 0.03
PMS1-201ENST00000342075 TIPINQ9BVW5 301 aa15.26■□□□□ 0.03
PMS1-201ENST00000342075 VPS16Q9H269 839 aa15.26■□□□□ 0.03
PMS1-201ENST00000342075 ARHGAP28Q9P2N2 729 aa15.26■□□□□ 0.03
PMS1-201ENST00000342075 FGFR4P22455 802 aa15.26■□□□□ 0.03
PMS1-201ENST00000342075 KIZQ2M2Z5 673 aa15.26■□□□□ 0.03
PMS1-201ENST00000342075 KIAA0319LQ8IZA0 1049 aa15.26■□□□□ 0.03
PMS1-201ENST00000342075 RDH13Q8NBN7 331 aa15.26■□□□□ 0.03
PMS1-201ENST00000342075 DEPTORQ8TB45 409 aa15.26■□□□□ 0.03
PMS1-201ENST00000342075 CNOT6LQ96LI5 555 aaKnown RBP15.26■□□□□ 0.03
PMS1-201ENST00000342075 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.26■□□□□ 0.03
PMS1-201ENST00000342075 SPC25Q9HBM1 224 aa15.26■□□□□ 0.03
PMS1-201ENST00000342075 AGPAT3Q9NRZ7 376 aa15.26■□□□□ 0.03
PMS1-201ENST00000342075 A0A087WZ62 844 aa15.25■□□□□ 0.03
PMS1-201ENST00000342075 BICDL2A1A5D9 508 aa15.25■□□□□ 0.03
PMS1-201ENST00000342075 EIF3DO15371 548 aaKnown RBP eCLIP15.25■□□□□ 0.03
PMS1-201ENST00000342075 TEX33O43247 280 aa15.25■□□□□ 0.03
PMS1-201ENST00000342075 HSPA1AP0DMV8 641 aaKnown RBP15.25■□□□□ 0.03
PMS1-201ENST00000342075 HSPA1BP0DMV9 641 aaKnown RBP15.25■□□□□ 0.03
PMS1-201ENST00000342075 ZNF75DP51815 510 aa15.25■□□□□ 0.03
PMS1-201ENST00000342075 SMTNP53814 917 aa15.25■□□□□ 0.03
PMS1-201ENST00000342075 TCP11X2Q5H9J9 407 aa15.25■□□□□ 0.03
PMS1-201ENST00000342075 GDF6Q6KF10 455 aaPredicted RBP15.25■□□□□ 0.03
PMS1-201ENST00000342075 C7orf31Q8N865 590 aa15.25■□□□□ 0.03
PMS1-201ENST00000342075 ZBTB45Q96K62 511 aaPredicted RBP15.25■□□□□ 0.03
PMS1-201ENST00000342075 DEFB118Q96PH6 123 aa15.25■□□□□ 0.03
PMS1-201ENST00000342075 FDXACB1Q9BRP7 624 aaPredicted RBP15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms