RNA–Protein interactions for RNA: ENST00000341947.6

COL11A2-201, Transcript of collagen type XI alpha 2 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL11A2, Length 6,425 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2-201ENST00000341947 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.25■□□□□ 0.19
COL11A2-201ENST00000341947 PBRM1Q86U86 1689 aa16.25■□□□□ 0.19
COL11A2-201ENST00000341947 MFAP3LO75121 409 aa16.25■□□□□ 0.19
COL11A2-201ENST00000341947 NKX1-1Q15270 411 aaPredicted RBP16.25■□□□□ 0.19
COL11A2-201ENST00000341947 CEP170Q5SW79 1584 aa16.25■□□□□ 0.19
COL11A2-201ENST00000341947 POTEMA6NI47 508 aa16.24■□□□□ 0.19
COL11A2-201ENST00000341947 ZRANB2O95218 330 aaKnown RBP eCLIP16.24■□□□□ 0.19
COL11A2-201ENST00000341947 SPARCL1Q14515 664 aa16.24■□□□□ 0.19
COL11A2-201ENST00000341947 PTCH1Q13635 1447 aa16.24■□□□□ 0.19
COL11A2-201ENST00000341947 CFAP65Q6ZU64 1925 aaKnown RBP16.24■□□□□ 0.19
COL11A2-201ENST00000341947 UTYO14607 1347 aa16.24■□□□□ 0.19
COL11A2-201ENST00000341947 PODNQ7Z5L7 613 aa16.24■□□□□ 0.19
COL11A2-201ENST00000341947 TTC39CQ8N584 583 aa16.24■□□□□ 0.19
COL11A2-201ENST00000341947 MRPL4Q9BYD3 311 aaKnown RBP16.24■□□□□ 0.19
COL11A2-201ENST00000341947 FAM96AQ9H5X1 160 aa16.24■□□□□ 0.19
COL11A2-201ENST00000341947 SUFUQ9UMX1 484 aa16.24■□□□□ 0.19
COL11A2-201ENST00000341947 FCER1AP12319 257 aa16.24■□□□□ 0.19
COL11A2-201ENST00000341947 SMARCA1P28370 1054 aa16.24■□□□□ 0.19
COL11A2-201ENST00000341947 COPB2P35606 906 aa16.24■□□□□ 0.19
COL11A2-201ENST00000341947 COPS2P61201 443 aa16.24■□□□□ 0.19
COL11A2-201ENST00000341947 CUL4AQ13619 759 aa16.24■□□□□ 0.19
COL11A2-201ENST00000341947 ASIC4Q96FT7 647 aa16.24■□□□□ 0.19
COL11A2-201ENST00000341947 SPATA33Q96N06 139 aa16.24■□□□□ 0.19
COL11A2-201ENST00000341947 KIFC3Q9BVG8 833 aa16.24■□□□□ 0.19
COL11A2-201ENST00000341947 TRIM55Q9BYV6 548 aa16.24■□□□□ 0.19
COL11A2-201ENST00000341947 POLR3FQ9H1D9 316 aaPredicted RBP16.24■□□□□ 0.19
COL11A2-201ENST00000341947 KLHL38Q2WGJ6 581 aa16.24■□□□□ 0.19
COL11A2-201ENST00000341947 ACCSLQ4AC99 568 aa16.24■□□□□ 0.19
COL11A2-201ENST00000341947 SYNE4Q8N205 404 aa16.24■□□□□ 0.19
COL11A2-201ENST00000341947 RMDN2Q96LZ7 410 aa16.24■□□□□ 0.19
COL11A2-201ENST00000341947 SARS2Q9NP81 518 aaKnown RBP16.24■□□□□ 0.19
COL11A2-201ENST00000341947 SYNMO15061 1565 aa16.24■□□□□ 0.19
COL11A2-201ENST00000341947 PLEKHG2Q9H7P9 1386 aa16.24■□□□□ 0.19
COL11A2-201ENST00000341947 PALMO75781 387 aa16.24■□□□□ 0.19
COL11A2-201ENST00000341947 ACTR5Q9H9F9 607 aaPredicted RBP16.24■□□□□ 0.19
COL11A2-201ENST00000341947 NEDD4P46934 1319 aa16.24■□□□□ 0.19
COL11A2-201ENST00000341947 DCTN3O75935 186 aa16.23■□□□□ 0.19
COL11A2-201ENST00000341947 P4HBP07237 508 aaKnown RBP16.23■□□□□ 0.19
COL11A2-201ENST00000341947 SWSAP1Q6NVH7 229 aa16.23■□□□□ 0.19
COL11A2-201ENST00000341947 SYT2Q8N9I0 419 aaPredicted RBP16.23■□□□□ 0.19
COL11A2-201ENST00000341947 HEMGNQ9BXL5 484 aa16.23■□□□□ 0.19
COL11A2-201ENST00000341947 NARFQ9UHQ1 456 aa16.23■□□□□ 0.19
COL11A2-201ENST00000341947 SCOCQ9UIL1 159 aa16.23■□□□□ 0.19
COL11A2-201ENST00000341947 INTUQ9ULD6 942 aa16.23■□□□□ 0.19
COL11A2-201ENST00000341947 FRMD3A2A2Y4 597 aa16.23■□□□□ 0.19
COL11A2-201ENST00000341947 E2F6O75461 281 aa16.23■□□□□ 0.19
COL11A2-201ENST00000341947 EFHC2Q5JST6 749 aa16.23■□□□□ 0.19
COL11A2-201ENST00000341947 RASSF3Q86WH2 238 aa16.23■□□□□ 0.19
COL11A2-201ENST00000341947 GABBR1Q9UBS5 961 aa16.23■□□□□ 0.19
COL11A2-201ENST00000341947 STK36Q9NRP7 1315 aa16.23■□□□□ 0.19
COL11A2-201ENST00000341947 RPSAP08865 295 aaKnown RBP16.23■□□□□ 0.19
COL11A2-201ENST00000341947 GPSM2P81274 684 aa16.23■□□□□ 0.19
COL11A2-201ENST00000341947 CAV1Q03135 178 aa16.23■□□□□ 0.19
COL11A2-201ENST00000341947 KCNA1Q09470 495 aa16.23■□□□□ 0.19
COL11A2-201ENST00000341947 LBRQ14739 615 aaKnown RBP16.23■□□□□ 0.19
COL11A2-201ENST00000341947 ITPRIPL1Q6GPH6 555 aa16.23■□□□□ 0.19
COL11A2-201ENST00000341947 RNF181Q9P0P0 153 aa16.23■□□□□ 0.19
COL11A2-201ENST00000341947 APOBEC2Q9Y235 224 aaKnown RBP16.23■□□□□ 0.19
COL11A2-201ENST00000341947 SKIP12755 728 aa16.23■□□□□ 0.19
COL11A2-201ENST00000341947 COASYQ13057 564 aa16.23■□□□□ 0.19
COL11A2-201ENST00000341947 DCAF4L1Q3SXM0 396 aa16.23■□□□□ 0.19
COL11A2-201ENST00000341947 NAALADL2Q58DX5 795 aa16.23■□□□□ 0.19
COL11A2-201ENST00000341947 NEUROG2Q9H2A3 272 aa16.23■□□□□ 0.19
COL11A2-201ENST00000341947 FAM95CA0A1B0GW59 222 aa16.23■□□□□ 0.19
COL11A2-201ENST00000341947 MDM2Q00987 491 aaPredicted RBP16.23■□□□□ 0.19
COL11A2-201ENST00000341947 SH3KBP1Q96B97 665 aa16.23■□□□□ 0.19
COL11A2-201ENST00000341947 PARD6BQ9BYG5 372 aa16.23■□□□□ 0.19
COL11A2-201ENST00000341947 VPS11Q9H270 941 aa16.23■□□□□ 0.19
COL11A2-201ENST00000341947 ACAD9Q9H845 621 aa16.23■□□□□ 0.19
COL11A2-201ENST00000341947 CD209Q9NNX6 404 aa16.23■□□□□ 0.19
COL11A2-201ENST00000341947 CTIFO43310 598 aaKnown RBP16.22■□□□□ 0.19
COL11A2-201ENST00000341947 QARSP47897 775 aaKnown RBP16.22■□□□□ 0.19
COL11A2-201ENST00000341947 C11orf70Q9BRQ4 267 aa16.22■□□□□ 0.19
COL11A2-201ENST00000341947 IP6K2Q9UHH9 426 aa16.22■□□□□ 0.19
COL11A2-201ENST00000341947 NFU1Q9UMS0 254 aa16.22■□□□□ 0.19
COL11A2-201ENST00000341947 MROH7-TTC4A0A0A0MT08 1334 aa16.22■□□□□ 0.19
COL11A2-201ENST00000341947 USP17L15C9J2P7 530 aa16.22■□□□□ 0.19
COL11A2-201ENST00000341947 USP17L13C9JLJ4 530 aa16.22■□□□□ 0.19
COL11A2-201ENST00000341947 USP17L11C9JVI0 530 aa16.22■□□□□ 0.19
COL11A2-201ENST00000341947 USP17L18D6R9N7 530 aa16.22■□□□□ 0.19
COL11A2-201ENST00000341947 USP17L22D6RA61 530 aa16.22■□□□□ 0.19
COL11A2-201ENST00000341947 USP17L17D6RBQ6 530 aa16.22■□□□□ 0.19
COL11A2-201ENST00000341947 USP17L19D6RCP7 530 aa16.22■□□□□ 0.19
COL11A2-201ENST00000341947 USP17L20D6RJB6 530 aa16.22■□□□□ 0.19
COL11A2-201ENST00000341947 CPB1P15086 417 aa16.22■□□□□ 0.19
COL11A2-201ENST00000341947 ADORA2BP29275 332 aa16.22■□□□□ 0.19
COL11A2-201ENST00000341947 VAMP7P51809 220 aa16.22■□□□□ 0.19
COL11A2-201ENST00000341947 USP17L24Q0WX57 530 aa16.22■□□□□ 0.19
COL11A2-201ENST00000341947 HLFQ16534 295 aa16.22■□□□□ 0.19
COL11A2-201ENST00000341947 USP17L6PQ6QN14 398 aa16.22■□□□□ 0.19
COL11A2-201ENST00000341947 TRIM62Q9BVG3 475 aa16.22■□□□□ 0.19
COL11A2-201ENST00000341947 CAPN11Q9UMQ6 739 aa16.22■□□□□ 0.19
COL11A2-201ENST00000341947 MINPP1Q9UNW1 487 aa16.22■□□□□ 0.19
COL11A2-201ENST00000341947 COL15A1P39059 1388 aa16.22■□□□□ 0.19
COL11A2-201ENST00000341947 E9PMD0 336 aa16.22■□□□□ 0.19
COL11A2-201ENST00000341947 ORC2Q13416 577 aaPredicted RBP16.22■□□□□ 0.19
COL11A2-201ENST00000341947 VEPH1Q14D04 833 aa16.22■□□□□ 0.19
COL11A2-201ENST00000341947 YAF2Q8IY57 180 aa16.22■□□□□ 0.19
COL11A2-201ENST00000341947 KYAT1Q16773 422 aa16.22■□□□□ 0.19
COL11A2-201ENST00000341947 DYRK4Q9NR20 520 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms