RNA–Protein interactions for RNA: ENST00000341529.7

CDH5-201, Transcript of cadherin 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH5, Length 4,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-201ENST00000341529 BBS9Q3SYG4 887 aa12.88□□□□□ -0.35
CDH5-201ENST00000341529 RC3H1Q5TC82 1133 aaKnown RBP12.88□□□□□ -0.35
CDH5-201ENST00000341529 ADAM22Q9P0K1 906 aa12.88□□□□□ -0.35
CDH5-201ENST00000341529 RIC1Q4ADV7 1423 aa12.88□□□□□ -0.35
CDH5-201ENST00000341529 PIK3R2O00459 728 aa12.88□□□□□ -0.35
CDH5-201ENST00000341529 TNNC2P02585 160 aa12.88□□□□□ -0.35
CDH5-201ENST00000341529 KRT81Q14533 505 aa12.88□□□□□ -0.35
CDH5-201ENST00000341529 SHROOM1Q2M3G4 852 aaPredicted RBP12.88□□□□□ -0.35
CDH5-201ENST00000341529 PARP2Q9UGN5 583 aa12.88□□□□□ -0.35
CDH5-201ENST00000341529 PCSK1NQ9UHG2 260 aa12.88□□□□□ -0.35
CDH5-201ENST00000341529 ITIH6Q6UXX5 1313 aa12.88□□□□□ -0.35
CDH5-201ENST00000341529 RNF8O76064 485 aa12.87□□□□□ -0.35
CDH5-201ENST00000341529 MDM2Q00987 491 aaPredicted RBP12.87□□□□□ -0.35
CDH5-201ENST00000341529 HIBCHQ6NVY1 386 aaPredicted RBP12.87□□□□□ -0.35
CDH5-201ENST00000341529 CCDC110Q8TBZ0 833 aa12.87□□□□□ -0.35
CDH5-201ENST00000341529 DNAI2Q9GZS0 605 aa12.87□□□□□ -0.35
CDH5-201ENST00000341529 PIM2Q9P1W9 311 aa12.87□□□□□ -0.35
CDH5-201ENST00000341529 RNF14Q9UBS8 474 aa12.87□□□□□ -0.35
CDH5-201ENST00000341529 PLAGL2Q9UPG8 496 aa12.87□□□□□ -0.35
CDH5-201ENST00000341529 RAD51CO43502 376 aa12.87□□□□□ -0.35
CDH5-201ENST00000341529 EYA4O95677 639 aa12.87□□□□□ -0.35
CDH5-201ENST00000341529 MTMR2Q13614 643 aa12.87□□□□□ -0.35
CDH5-201ENST00000341529 BAATQ14032 418 aaPredicted RBP12.87□□□□□ -0.35
CDH5-201ENST00000341529 IL17AQ16552 155 aa12.87□□□□□ -0.35
CDH5-201ENST00000341529 SEZ6Q53EL9 994 aa12.87□□□□□ -0.35
CDH5-201ENST00000341529 NUGGCQ68CJ6 796 aa12.87□□□□□ -0.35
CDH5-201ENST00000341529 FAM160B2Q86V87 743 aa12.87□□□□□ -0.35
CDH5-201ENST00000341529 WHAMMQ8TF30 809 aa12.87□□□□□ -0.35
CDH5-201ENST00000341529 RNPC3Q96LT9 517 aaKnown RBP12.87□□□□□ -0.35
CDH5-201ENST00000341529 RILPQ96NA2 401 aa12.87□□□□□ -0.35
CDH5-201ENST00000341529 NUP85Q9BW27 656 aa12.87□□□□□ -0.35
CDH5-201ENST00000341529 FAM49AQ9H0Q0 323 aaPredicted RBP12.87□□□□□ -0.35
CDH5-201ENST00000341529 TMEM150BA6NC51 233 aa12.87□□□□□ -0.35
CDH5-201ENST00000341529 FGFR4P22455 802 aa12.87□□□□□ -0.35
CDH5-201ENST00000341529 PCK1P35558 622 aa12.87□□□□□ -0.35
CDH5-201ENST00000341529 ERFP50548 548 aa12.87□□□□□ -0.35
CDH5-201ENST00000341529 SLC27A3Q5K4L6 730 aa12.87□□□□□ -0.35
CDH5-201ENST00000341529 DNAJC24Q6P3W2 148 aa12.87□□□□□ -0.35
CDH5-201ENST00000341529 PRPF38AQ8NAV1 312 aaKnown RBP12.87□□□□□ -0.35
CDH5-201ENST00000341529 TMEM143Q96AN5 459 aa12.87□□□□□ -0.35
CDH5-201ENST00000341529 NRBP2Q9NSY0 501 aa12.87□□□□□ -0.35
CDH5-201ENST00000341529 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.87□□□□□ -0.35
CDH5-201ENST00000341529 KLHL14Q9P2G3 628 aa12.87□□□□□ -0.35
CDH5-201ENST00000341529 NWD1Q149M9 1564 aa12.87□□□□□ -0.35
CDH5-201ENST00000341529 MSH4O15457 936 aa12.86□□□□□ -0.35
CDH5-201ENST00000341529 CYP2C19P33261 490 aa12.86□□□□□ -0.35
CDH5-201ENST00000341529 BEND6Q5SZJ8 279 aaPredicted RBP12.86□□□□□ -0.35
CDH5-201ENST00000341529 ANKRD20A3Q5VUR7 823 aa12.86□□□□□ -0.35
CDH5-201ENST00000341529 TRIM68Q6AZZ1 485 aa12.86□□□□□ -0.35
CDH5-201ENST00000341529 SAMD7Q7Z3H4 446 aa12.86□□□□□ -0.35
CDH5-201ENST00000341529 CDAN1Q8IWY9 1227 aa12.86□□□□□ -0.35
CDH5-201ENST00000341529 MCUR1Q96AQ8 359 aa12.86□□□□□ -0.35
CDH5-201ENST00000341529 DUSP9Q99956 384 aaKnown RBP12.86□□□□□ -0.35
CDH5-201ENST00000341529 ZNF446Q9NWS9 450 aa12.86□□□□□ -0.35
CDH5-201ENST00000341529 EIF4E1BA6NMX2 242 aaKnown RBP12.86□□□□□ -0.35
CDH5-201ENST00000341529 P4HBP07237 508 aaKnown RBP12.86□□□□□ -0.35
CDH5-201ENST00000341529 RWDD2BP57060 319 aa12.86□□□□□ -0.35
CDH5-201ENST00000341529 CFAP157Q5JU67 520 aa12.86□□□□□ -0.35
CDH5-201ENST00000341529 RFX6Q8HWS3 928 aa12.86□□□□□ -0.35
CDH5-201ENST00000341529 RNF10Q8N5U6 811 aaKnown RBP12.86□□□□□ -0.35
CDH5-201ENST00000341529 SLC35G2Q8TBE7 412 aa12.86□□□□□ -0.35
CDH5-201ENST00000341529 ZNF564Q8TBZ8 553 aaPredicted RBP12.86□□□□□ -0.35
CDH5-201ENST00000341529 CRAMP1Q96RY5 1269 aa12.86□□□□□ -0.35
CDH5-201ENST00000341529 KCNA1Q09470 495 aa12.86□□□□□ -0.35
CDH5-201ENST00000341529 ALS2CLQ60I27 953 aa12.86□□□□□ -0.35
CDH5-201ENST00000341529 SRRM1Q8IYB3 904 aaKnown RBP12.86□□□□□ -0.35
CDH5-201ENST00000341529 VPS52Q8N1B4 723 aa12.86□□□□□ -0.35
CDH5-201ENST00000341529 FBXL16Q8N461 479 aa12.86□□□□□ -0.35
CDH5-201ENST00000341529 MTMR8Q96EF0 704 aa12.86□□□□□ -0.35
CDH5-201ENST00000341529 NGRNQ9NPE2 291 aaKnown RBP12.86□□□□□ -0.35
CDH5-201ENST00000341529 FZD1Q9UP38 647 aa12.86□□□□□ -0.35
CDH5-201ENST00000341529 A6NNZ2 444 aa12.86□□□□□ -0.35
CDH5-201ENST00000341529 WDR64B1ANS9 1081 aa12.86□□□□□ -0.35
CDH5-201ENST00000341529 ADAMTS3O15072 1205 aa12.86□□□□□ -0.35
CDH5-201ENST00000341529 EPHB6O15197 1021 aa12.86□□□□□ -0.35
CDH5-201ENST00000341529 DPEP1P16444 411 aa12.86□□□□□ -0.35
CDH5-201ENST00000341529 SOX5P35711 763 aa12.86□□□□□ -0.35
CDH5-201ENST00000341529 CLNS1AP54105 237 aaKnown RBP12.86□□□□□ -0.35
CDH5-201ENST00000341529 GPC5P78333 572 aa12.86□□□□□ -0.35
CDH5-201ENST00000341529 DDR1Q08345 913 aa12.86□□□□□ -0.35
CDH5-201ENST00000341529 KCTD2Q14681 263 aa12.86□□□□□ -0.35
CDH5-201ENST00000341529 COG2Q14746 738 aa12.86□□□□□ -0.35
CDH5-201ENST00000341529 TUBB8Q3ZCM7 444 aa12.86□□□□□ -0.35
CDH5-201ENST00000341529 TBC1D1Q86TI0 1168 aaPredicted RBP12.86□□□□□ -0.35
CDH5-201ENST00000341529 BTBD6Q96KE9 485 aa12.86□□□□□ -0.35
CDH5-201ENST00000341529 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.86□□□□□ -0.35
CDH5-201ENST00000341529 CCDC160A6NGH7 325 aa12.85□□□□□ -0.35
CDH5-201ENST00000341529 FMO5P49326 533 aa12.85□□□□□ -0.35
CDH5-201ENST00000341529 SOX10P56693 466 aa12.85□□□□□ -0.35
CDH5-201ENST00000341529 ITIH3Q06033 890 aa12.85□□□□□ -0.35
CDH5-201ENST00000341529 SLC10A5Q5PT55 438 aa12.85□□□□□ -0.35
CDH5-201ENST00000341529 FYB2Q5VWT5 728 aa12.85□□□□□ -0.35
CDH5-201ENST00000341529 CCDC197Q8NCU1 140 aa12.85□□□□□ -0.35
CDH5-201ENST00000341529 CPA5Q8WXQ8 436 aa12.85□□□□□ -0.35
CDH5-201ENST00000341529 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.85□□□□□ -0.35
CDH5-201ENST00000341529 PDXKO00764 312 aa12.85□□□□□ -0.35
CDH5-201ENST00000341529 ARP10275 920 aa12.85□□□□□ -0.35
CDH5-201ENST00000341529 PPP2R5EQ16537 467 aa12.85□□□□□ -0.35
CDH5-201ENST00000341529 SPIRE2Q8WWL2 714 aa12.85□□□□□ -0.35
CDH5-201ENST00000341529 ERGIC2Q96RQ1 377 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms