RNA–Protein interactions for RNA: ENST00000341421.7

TRAK1-202, Transcript of trafficking kinesin protein 1, humanhuman

TSL 1 (best) BASIC

Gene TRAK1, Length 4,620 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAK1-202ENST00000341421 HARSP12081 509 aaKnown RBP12.62□□□□□ -0.39
TRAK1-202ENST00000341421 SLC8A3P57103 927 aa12.62□□□□□ -0.39
TRAK1-202ENST00000341421 ADCY2Q08462 1091 aa12.62□□□□□ -0.39
TRAK1-202ENST00000341421 COBLL1Q53SF7 1204 aa12.62□□□□□ -0.39
TRAK1-202ENST00000341421 PADI6Q6TGC4 694 aa12.62□□□□□ -0.39
TRAK1-202ENST00000341421 CLEC10AQ8IUN9 316 aa12.62□□□□□ -0.39
TRAK1-202ENST00000341421 SYT2Q8N9I0 419 aaPredicted RBP12.62□□□□□ -0.39
TRAK1-202ENST00000341421 CAPN6Q9Y6Q1 641 aa12.62□□□□□ -0.39
TRAK1-202ENST00000341421 CFAP73A6NFT4 308 aa12.62□□□□□ -0.39
TRAK1-202ENST00000341421 ENTPD3O75355 529 aa12.62□□□□□ -0.39
TRAK1-202ENST00000341421 NDUFB10O96000 172 aa12.62□□□□□ -0.39
TRAK1-202ENST00000341421 MAPK4P31152 587 aa12.62□□□□□ -0.39
TRAK1-202ENST00000341421 C6orf118Q5T5N4 469 aa12.62□□□□□ -0.39
TRAK1-202ENST00000341421 LRIG3Q6UXM1 1119 aa12.62□□□□□ -0.39
TRAK1-202ENST00000341421 POLR3CQ9BUI4 534 aaPredicted RBP12.62□□□□□ -0.39
TRAK1-202ENST00000341421 TDRD3Q9H7E2 651 aaKnown RBP12.62□□□□□ -0.39
TRAK1-202ENST00000341421 TBC1D22BQ9NU19 505 aa12.62□□□□□ -0.39
TRAK1-202ENST00000341421 DMGDHQ9UI17 866 aaKnown RBP12.62□□□□□ -0.39
TRAK1-202ENST00000341421 USTQ9Y2C2 406 aa12.62□□□□□ -0.39
TRAK1-202ENST00000341421 NPHP3-ACAD11A0A0J9YXS1 232 aa12.61□□□□□ -0.39
TRAK1-202ENST00000341421 THAP12O43422 761 aa12.61□□□□□ -0.39
TRAK1-202ENST00000341421 P4HBP07237 508 aaKnown RBP12.61□□□□□ -0.39
TRAK1-202ENST00000341421 STX2P32856 288 aa12.61□□□□□ -0.39
TRAK1-202ENST00000341421 JAK3P52333 1124 aa12.61□□□□□ -0.39
TRAK1-202ENST00000341421 AMPD2Q01433 879 aa12.61□□□□□ -0.39
TRAK1-202ENST00000341421 C6orf163Q5TEZ5 329 aa12.61□□□□□ -0.39
TRAK1-202ENST00000341421 KLHL29Q96CT2 875 aa12.61□□□□□ -0.39
TRAK1-202ENST00000341421 TFR2Q9UP52 801 aa12.61□□□□□ -0.39
TRAK1-202ENST00000341421 KLRC1P26715 233 aa12.61□□□□□ -0.39
TRAK1-202ENST00000341421 RWDD2BP57060 319 aa12.61□□□□□ -0.39
TRAK1-202ENST00000341421 CEP55Q53EZ4 464 aa12.61□□□□□ -0.39
TRAK1-202ENST00000341421 FOXR2Q6PJQ5 311 aa12.61□□□□□ -0.39
TRAK1-202ENST00000341421 SEC16BQ96JE7 1060 aa12.61□□□□□ -0.39
TRAK1-202ENST00000341421 TSC22D3Q99576 134 aa12.61□□□□□ -0.39
TRAK1-202ENST00000341421 DDX47Q9H0S4 455 aaKnown RBP12.61□□□□□ -0.39
TRAK1-202ENST00000341421 RAB20Q9NX57 234 aa12.61□□□□□ -0.39
TRAK1-202ENST00000341421 PACSIN2Q9UNF0 486 aaPredicted RBP12.61□□□□□ -0.39
TRAK1-202ENST00000341421 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.61□□□□□ -0.39
TRAK1-202ENST00000341421 C5P01031 1676 aa12.61□□□□□ -0.39
TRAK1-202ENST00000341421 SMIM22K7EJ46 135 aa12.61□□□□□ -0.39
TRAK1-202ENST00000341421 GGPS1O95749 300 aa12.61□□□□□ -0.39
TRAK1-202ENST00000341421 DHX34Q14147 1143 aaKnown RBP12.61□□□□□ -0.39
TRAK1-202ENST00000341421 TAF11Q15544 211 aa12.61□□□□□ -0.39
TRAK1-202ENST00000341421 SGO2Q562F6 1265 aa12.61□□□□□ -0.39
TRAK1-202ENST00000341421 FAM133BQ5BKY9 247 aaKnown RBP12.61□□□□□ -0.39
TRAK1-202ENST00000341421 KLHDC7AQ5VTJ3 777 aa12.61□□□□□ -0.39
TRAK1-202ENST00000341421 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.61□□□□□ -0.39
TRAK1-202ENST00000341421 C21orf2O43822 256 aa12.61□□□□□ -0.39
TRAK1-202ENST00000341421 CHRNA3P32297 505 aa12.61□□□□□ -0.39
TRAK1-202ENST00000341421 IL17AQ16552 155 aa12.61□□□□□ -0.39
TRAK1-202ENST00000341421 TMEM119Q4V9L6 283 aa12.61□□□□□ -0.39
TRAK1-202ENST00000341421 DUSP10Q9Y6W6 482 aa12.61□□□□□ -0.39
TRAK1-202ENST00000341421 LAMB4A4D0S4 1761 aa12.6□□□□□ -0.39
TRAK1-202ENST00000341421 IPO5O00410 1097 aaKnown RBP12.6□□□□□ -0.39
TRAK1-202ENST00000341421 KCNV1Q6PIU1 500 aa12.6□□□□□ -0.39
TRAK1-202ENST00000341421 GLYCTKQ8IVS8 523 aa12.6□□□□□ -0.39
TRAK1-202ENST00000341421 C4orf32Q8N8J7 132 aa12.6□□□□□ -0.39
TRAK1-202ENST00000341421 USP38Q8NB14 1042 aa12.6□□□□□ -0.39
TRAK1-202ENST00000341421 MRRFQ96E11 262 aaKnown RBP12.6□□□□□ -0.39
TRAK1-202ENST00000341421 PNMA5Q96PV4 448 aa12.6□□□□□ -0.39
TRAK1-202ENST00000341421 RAB3IPQ96QF0 476 aaPredicted RBP12.6□□□□□ -0.39
TRAK1-202ENST00000341421 MAK16Q9BXY0 300 aaKnown RBP12.6□□□□□ -0.39
TRAK1-202ENST00000341421 MRPL47Q9HD33 250 aaKnown RBP12.6□□□□□ -0.39
TRAK1-202ENST00000341421 VAMP7P51809 220 aa12.6□□□□□ -0.39
TRAK1-202ENST00000341421 FYB2Q5VWT5 728 aa12.6□□□□□ -0.39
TRAK1-202ENST00000341421 CAVIN3Q969G5 261 aa12.6□□□□□ -0.39
TRAK1-202ENST00000341421 MS4A14Q96JA4 679 aa12.6□□□□□ -0.39
TRAK1-202ENST00000341421 TIPINQ9BVW5 301 aa12.6□□□□□ -0.39
TRAK1-202ENST00000341421 NOD2Q9HC29 1040 aa12.6□□□□□ -0.39
TRAK1-202ENST00000341421 BLOC1S4Q9NUP1 217 aa12.6□□□□□ -0.39
TRAK1-202ENST00000341421 GGA2Q9UJY4 613 aa12.6□□□□□ -0.39
TRAK1-202ENST00000341421 TRIM59Q8IWR1 403 aa12.6□□□□□ -0.39
TRAK1-202ENST00000341421 MTMR9Q96QG7 549 aa12.6□□□□□ -0.39
TRAK1-202ENST00000341421 ENO4A6NNW6 628 aa12.6□□□□□ -0.39
TRAK1-202ENST00000341421 PJA2O43164 708 aa12.6□□□□□ -0.39
TRAK1-202ENST00000341421 FMO5P49326 533 aa12.6□□□□□ -0.39
TRAK1-202ENST00000341421 CATSPER3Q86XQ3 398 aa12.6□□□□□ -0.39
TRAK1-202ENST00000341421 NSMCE1Q8WV22 266 aa12.6□□□□□ -0.39
TRAK1-202ENST00000341421 PSMD1Q99460 953 aa12.6□□□□□ -0.39
TRAK1-202ENST00000341421 AZI2Q9H6S1 392 aa12.6□□□□□ -0.39
TRAK1-202ENST00000341421 SUN1O94901 812 aa12.59□□□□□ -0.39
TRAK1-202ENST00000341421 KRT15P19012 456 aa12.59□□□□□ -0.39
TRAK1-202ENST00000341421 SLC9A1P19634 815 aa12.59□□□□□ -0.39
TRAK1-202ENST00000341421 RPUSD2Q8IZ73 545 aaKnown RBP12.59□□□□□ -0.39
TRAK1-202ENST00000341421 FUKQ8N0W3 1084 aa12.59□□□□□ -0.39
TRAK1-202ENST00000341421 CHMP6Q96FZ7 201 aa12.59□□□□□ -0.39
TRAK1-202ENST00000341421 CEP170P1Q96L14 293 aa12.59□□□□□ -0.39
TRAK1-202ENST00000341421 LXNQ9BS40 222 aa12.59□□□□□ -0.39
TRAK1-202ENST00000341421 TRIM4Q9C037 500 aa12.59□□□□□ -0.39
TRAK1-202ENST00000341421 APEX2Q9UBZ4 518 aa12.59□□□□□ -0.39
TRAK1-202ENST00000341421 RASGRF2O14827 1237 aa12.59□□□□□ -0.39
TRAK1-202ENST00000341421 MUTP22033 750 aa12.59□□□□□ -0.39
TRAK1-202ENST00000341421 QARSP47897 775 aaKnown RBP12.59□□□□□ -0.39
TRAK1-202ENST00000341421 SH3GL2Q99962 352 aa12.59□□□□□ -0.39
TRAK1-202ENST00000341421 RGL1Q9NZL6 768 aa12.59□□□□□ -0.39
TRAK1-202ENST00000341421 KLHL14Q9P2G3 628 aa12.59□□□□□ -0.39
TRAK1-202ENST00000341421 SUCLA2Q9P2R7 463 aaPredicted RBP12.59□□□□□ -0.39
TRAK1-202ENST00000341421 SPATA31A6Q5VVP1 1343 aa12.59□□□□□ -0.39
TRAK1-202ENST00000341421 WNT7AO00755 349 aa12.59□□□□□ -0.39
TRAK1-202ENST00000341421 VEGFAP15692 232 aaPredicted RBP12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms