RNA–Protein interactions for RNA: ENST00000340192.11

ERCC1-203, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 949 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-203ENST00000340192 INO80BQ9C086 356 aaPredicted RBP16.29■□□□□ 0.2
ERCC1-203ENST00000340192 IFT122Q9HBG6 1241 aa16.29■□□□□ 0.2
ERCC1-203ENST00000340192 XPNPEP1Q9NQW7 623 aa16.29■□□□□ 0.2
ERCC1-203ENST00000340192 TMEM161AQ9NX61 479 aa16.29■□□□□ 0.2
ERCC1-203ENST00000340192 RWDD3Q9Y3V2 267 aa16.29■□□□□ 0.2
ERCC1-203ENST00000340192 C5orf67F2Z3F1 127 aa16.28■□□□□ 0.2
ERCC1-203ENST00000340192 XRCC6P12956 609 aaKnown RBP eCLIP16.28■□□□□ 0.2
ERCC1-203ENST00000340192 RPA1P27694 616 aa16.28■□□□□ 0.2
ERCC1-203ENST00000340192 RARRES1P49788 294 aa16.28■□□□□ 0.2
ERCC1-203ENST00000340192 CUL4AQ13619 759 aa16.28■□□□□ 0.2
ERCC1-203ENST00000340192 FAM102BQ5T8I3 360 aa16.28■□□□□ 0.2
ERCC1-203ENST00000340192 POTEGQ6S5H5 508 aa16.28■□□□□ 0.2
ERCC1-203ENST00000340192 FERMT3Q86UX7 667 aa16.28■□□□□ 0.2
ERCC1-203ENST00000340192 ELAC1Q9H777 363 aaKnown RBP16.28■□□□□ 0.2
ERCC1-203ENST00000340192 ATP6V0A4Q9HBG4 840 aa16.28■□□□□ 0.2
ERCC1-203ENST00000340192 TBKBP1A7MCY6 615 aa16.27■□□□□ 0.2
ERCC1-203ENST00000340192 DGAT1O75907 488 aa16.27■□□□□ 0.2
ERCC1-203ENST00000340192 RB1P06400 928 aa16.27■□□□□ 0.2
ERCC1-203ENST00000340192 FGFR1P11362 822 aa16.27■□□□□ 0.2
ERCC1-203ENST00000340192 SKIV2LQ15477 1246 aaKnown RBP16.27■□□□□ 0.2
ERCC1-203ENST00000340192 RILPL1Q5EBL4 403 aa16.27■□□□□ 0.2
ERCC1-203ENST00000340192 CATSPER4Q7RTX7 472 aa16.27■□□□□ 0.2
ERCC1-203ENST00000340192 ECHDC2Q86YB7 292 aa16.27■□□□□ 0.2
ERCC1-203ENST00000340192 MRPL38Q96DV4 380 aaKnown RBP16.27■□□□□ 0.2
ERCC1-203ENST00000340192 NACC1Q96RE7 527 aa16.27■□□□□ 0.2
ERCC1-203ENST00000340192 C11orf84Q9BUA3 381 aaPredicted RBP16.27■□□□□ 0.2
ERCC1-203ENST00000340192 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.27■□□□□ 0.2
ERCC1-203ENST00000340192 CHST12Q9NRB3 414 aa16.27■□□□□ 0.2
ERCC1-203ENST00000340192 DACT1Q9NYF0 836 aa16.27■□□□□ 0.2
ERCC1-203ENST00000340192 LRWD1Q9UFC0 647 aa16.27■□□□□ 0.2
ERCC1-203ENST00000340192 PIN4Q9Y237 131 aaKnown RBP16.27■□□□□ 0.2
ERCC1-203ENST00000340192 A0A0U1RQF3 1178 aa16.26■□□□□ 0.19
ERCC1-203ENST00000340192 LAD1O00515 517 aa16.26■□□□□ 0.19
ERCC1-203ENST00000340192 ASAP2O43150 1006 aa16.26■□□□□ 0.19
ERCC1-203ENST00000340192 USO1O60763 962 aaKnown RBP16.26■□□□□ 0.19
ERCC1-203ENST00000340192 CCT6AP40227 531 aaKnown RBP16.26■□□□□ 0.19
ERCC1-203ENST00000340192 PDIA5Q14554 519 aa16.26■□□□□ 0.19
ERCC1-203ENST00000340192 MXD4Q14582 209 aaPredicted RBP16.26■□□□□ 0.19
ERCC1-203ENST00000340192 PTPROQ16827 1216 aa16.26■□□□□ 0.19
ERCC1-203ENST00000340192 HAUS3Q68CZ6 603 aa16.26■□□□□ 0.19
ERCC1-203ENST00000340192 IGSF22Q8N9C0 903 aa16.26■□□□□ 0.19
ERCC1-203ENST00000340192 RNF149Q8NC42 400 aa16.26■□□□□ 0.19
ERCC1-203ENST00000340192 RNF169Q8NCN4 708 aa16.26■□□□□ 0.19
ERCC1-203ENST00000340192 PLVAPQ9BX97 442 aa16.26■□□□□ 0.19
ERCC1-203ENST00000340192 MINDY3Q9H8M7 445 aa16.26■□□□□ 0.19
ERCC1-203ENST00000340192 THEGQ9P2T0 379 aa16.26■□□□□ 0.19
ERCC1-203ENST00000340192 DBR1Q9UK59 544 aaKnown RBP16.26■□□□□ 0.19
ERCC1-203ENST00000340192 PLXNA4Q9HCM2 1894 aa16.26■□□□□ 0.19
ERCC1-203ENST00000340192 ARL2P36404 184 aa16.25■□□□□ 0.19
ERCC1-203ENST00000340192 PRPHP41219 470 aa16.25■□□□□ 0.19
ERCC1-203ENST00000340192 PHKA2P46019 1235 aa16.25■□□□□ 0.19
ERCC1-203ENST00000340192 IL17AQ16552 155 aa16.25■□□□□ 0.19
ERCC1-203ENST00000340192 TWF2Q6IBS0 349 aaKnown RBP16.25■□□□□ 0.19
ERCC1-203ENST00000340192 SRGAP1Q7Z6B7 1085 aa16.25■□□□□ 0.19
ERCC1-203ENST00000340192 ASAP3Q8TDY4 903 aa16.25■□□□□ 0.19
ERCC1-203ENST00000340192 RAB34Q9BZG1 259 aa16.25■□□□□ 0.19
ERCC1-203ENST00000340192 RNF19AQ9NV58 838 aa16.25■□□□□ 0.19
ERCC1-203ENST00000340192 GRM6O15303 877 aa16.24■□□□□ 0.19
ERCC1-203ENST00000340192 HOXA2O43364 376 aa16.24■□□□□ 0.19
ERCC1-203ENST00000340192 EOMESO95936 686 aa16.24■□□□□ 0.19
ERCC1-203ENST00000340192 ATF7P17544 494 aaPredicted RBP16.24■□□□□ 0.19
ERCC1-203ENST00000340192 MUTP22033 750 aa16.24■□□□□ 0.19
ERCC1-203ENST00000340192 ATP2C1P98194 919 aaPredicted RBP16.24■□□□□ 0.19
ERCC1-203ENST00000340192 CAPSQ13938 189 aa16.24■□□□□ 0.19
ERCC1-203ENST00000340192 TFDP1Q14186 410 aa16.24■□□□□ 0.19
ERCC1-203ENST00000340192 ECM1Q16610 540 aa16.24■□□□□ 0.19
ERCC1-203ENST00000340192 DTHD1Q6ZMT9 781 aa16.24■□□□□ 0.19
ERCC1-203ENST00000340192 ZNF598Q86UK7 904 aaKnown RBP16.24■□□□□ 0.19
ERCC1-203ENST00000340192 ATXN2LQ8WWM7 1075 aaKnown RBP16.24■□□□□ 0.19
ERCC1-203ENST00000340192 P2RX5Q93086 422 aa16.24■□□□□ 0.19
ERCC1-203ENST00000340192 CASD1Q96PB1 797 aa16.24■□□□□ 0.19
ERCC1-203ENST00000340192 TRAIPQ9BWF2 469 aa16.24■□□□□ 0.19
ERCC1-203ENST00000340192 TMEM117Q9H0C3 514 aa16.24■□□□□ 0.19
ERCC1-203ENST00000340192 POLR3FQ9H1D9 316 aaPredicted RBP16.24■□□□□ 0.19
ERCC1-203ENST00000340192 ALG13Q9NP73 1137 aaKnown RBP16.24■□□□□ 0.19
ERCC1-203ENST00000340192 AGPAT5Q9NUQ2 364 aa16.24■□□□□ 0.19
ERCC1-203ENST00000340192 TYW1Q9NV66 732 aaKnown RBP16.24■□□□□ 0.19
ERCC1-203ENST00000340192 HCSTQ9UBK5 93 aa16.24■□□□□ 0.19
ERCC1-203ENST00000340192 ARHGEF35A5YM69 484 aa16.23■□□□□ 0.19
ERCC1-203ENST00000340192 PP2D1A8MPX8 630 aa16.23■□□□□ 0.19
ERCC1-203ENST00000340192 GLRA2P23416 452 aa16.23■□□□□ 0.19
ERCC1-203ENST00000340192 PTENP60484 403 aa16.23■□□□□ 0.19
ERCC1-203ENST00000340192 TFF2Q03403 129 aa16.23■□□□□ 0.19
ERCC1-203ENST00000340192 POU5F1BQ06416 359 aa16.23■□□□□ 0.19
ERCC1-203ENST00000340192 CLLU1OSQ5K130 101 aa16.23■□□□□ 0.19
ERCC1-203ENST00000340192 SPOUT1Q5T280 376 aaKnown RBP16.23■□□□□ 0.19
ERCC1-203ENST00000340192 MAEAQ7L5Y9 396 aa16.23■□□□□ 0.19
ERCC1-203ENST00000340192 ABI1Q8IZP0 508 aa16.23■□□□□ 0.19
ERCC1-203ENST00000340192 KLHL23Q8NBE8 558 aa16.23■□□□□ 0.19
ERCC1-203ENST00000340192 MCPH1Q8NEM0 835 aa16.23■□□□□ 0.19
ERCC1-203ENST00000340192 SNX29Q8TEQ0 813 aa16.23■□□□□ 0.19
ERCC1-203ENST00000340192 GPRC5CQ9NQ84 441 aa16.23■□□□□ 0.19
ERCC1-203ENST00000340192 PLAGL2Q9UPG8 496 aa16.23■□□□□ 0.19
ERCC1-203ENST00000340192 KIAA1024Q9UPX6 916 aa16.23■□□□□ 0.19
ERCC1-203ENST00000340192 STK24Q9Y6E0 443 aa16.23■□□□□ 0.19
ERCC1-203ENST00000340192 VPS37CA5D8V6 355 aaPredicted RBP16.22■□□□□ 0.19
ERCC1-203ENST00000340192 K7ELQ4 463 aaPredicted RBP16.22■□□□□ 0.19
ERCC1-203ENST00000340192 DLL1O00548 723 aa16.22■□□□□ 0.19
ERCC1-203ENST00000340192 ITGB1P05556 798 aa16.22■□□□□ 0.19
ERCC1-203ENST00000340192 PDCP20941 246 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms