RNA–Protein interactions for RNA: ENST00000340019.4

TMC1-202, Transcript of transmembrane channel like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TMC1, Length 3,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1-202ENST00000340019 SMTNP53814 917 aa8.62□□□□□ -1.03
TMC1-202ENST00000340019 TPM4P67936 248 aa8.62□□□□□ -1.03
TMC1-202ENST00000340019 ADAM17P78536 824 aa8.62□□□□□ -1.03
TMC1-202ENST00000340019 PPFIA1Q13136 1202 aa8.62□□□□□ -1.03
TMC1-202ENST00000340019 GRIK4Q16099 956 aa8.62□□□□□ -1.03
TMC1-202ENST00000340019 MTHFD1LQ6UB35 978 aa8.62□□□□□ -1.03
TMC1-202ENST00000340019 STXBP4Q6ZWJ1 553 aa8.62□□□□□ -1.03
TMC1-202ENST00000340019 IRF2BP1Q8IU81 584 aa8.62□□□□□ -1.03
TMC1-202ENST00000340019 ZC3H3Q8IXZ2 948 aaKnown RBP8.62□□□□□ -1.03
TMC1-202ENST00000340019 LRRC71Q8N4P6 559 aa8.62□□□□□ -1.03
TMC1-202ENST00000340019 TCP11Q8WWU5 503 aa8.62□□□□□ -1.03
TMC1-202ENST00000340019 ZBTB10Q96DT7 871 aa8.62□□□□□ -1.03
TMC1-202ENST00000340019 KIFC3Q9BVG8 833 aa8.62□□□□□ -1.03
TMC1-202ENST00000340019 KATNAL1Q9BW62 490 aa8.62□□□□□ -1.03
TMC1-202ENST00000340019 SPC25Q9HBM1 224 aa8.62□□□□□ -1.03
TMC1-202ENST00000340019 KMT5AQ9NQR1 393 aa8.62□□□□□ -1.03
TMC1-202ENST00000340019 NRCAMQ92823 1304 aa8.62□□□□□ -1.03
TMC1-202ENST00000340019 PDXKO00764 312 aa8.62□□□□□ -1.03
TMC1-202ENST00000340019 MSCO60682 206 aa8.62□□□□□ -1.03
TMC1-202ENST00000340019 SMIM10L2AP0DMW4 78 aa8.62□□□□□ -1.03
TMC1-202ENST00000340019 SMIM10L2BP0DMW5 78 aa8.62□□□□□ -1.03
TMC1-202ENST00000340019 HOXC8P31273 242 aa8.62□□□□□ -1.03
TMC1-202ENST00000340019 LHX8Q68G74 356 aa8.62□□□□□ -1.03
TMC1-202ENST00000340019 EFCAB12Q6NXP0 572 aa8.62□□□□□ -1.03
TMC1-202ENST00000340019 LRRC55Q6ZSA7 311 aa8.62□□□□□ -1.03
TMC1-202ENST00000340019 APTXQ7Z2E3 356 aaKnown RBP8.62□□□□□ -1.03
TMC1-202ENST00000340019 KSR1Q8IVT5 923 aa8.62□□□□□ -1.03
TMC1-202ENST00000340019 CSGALNACT2Q8N6G5 542 aa8.62□□□□□ -1.03
TMC1-202ENST00000340019 LMBR1Q8WVP7 490 aa8.62□□□□□ -1.03
TMC1-202ENST00000340019 PRPF31Q8WWY3 499 aaKnown RBP8.62□□□□□ -1.03
TMC1-202ENST00000340019 HVCN1Q96D96 273 aa8.62□□□□□ -1.03
TMC1-202ENST00000340019 IFT74Q96LB3 600 aa8.62□□□□□ -1.03
TMC1-202ENST00000340019 THAP9Q9H5L6 903 aa8.62□□□□□ -1.03
TMC1-202ENST00000340019 SUGCTQ9HAC7 445 aa8.62□□□□□ -1.03
TMC1-202ENST00000340019 TYW1Q9NV66 732 aaKnown RBP8.62□□□□□ -1.03
TMC1-202ENST00000340019 TRIP12Q14669 1992 aaPredicted RBP8.62□□□□□ -1.03
TMC1-202ENST00000340019 MBLAC1A4D2B0 266 aaPredicted RBP8.62□□□□□ -1.03
TMC1-202ENST00000340019 RRN3P2A6NIE6 340 aa8.62□□□□□ -1.03
TMC1-202ENST00000340019 CCDC169A6NNP5 214 aa8.62□□□□□ -1.03
TMC1-202ENST00000340019 SCP2P22307 547 aa8.62□□□□□ -1.03
TMC1-202ENST00000340019 IGBP1P78318 339 aa8.62□□□□□ -1.03
TMC1-202ENST00000340019 CAPSQ13938 189 aa8.62□□□□□ -1.03
TMC1-202ENST00000340019 HIC1Q14526 733 aa8.62□□□□□ -1.03
TMC1-202ENST00000340019 MXD4Q14582 209 aaPredicted RBP8.62□□□□□ -1.03
TMC1-202ENST00000340019 PPP2R5AQ15172 486 aa8.62□□□□□ -1.03
TMC1-202ENST00000340019 EDRF1Q3B7T1 1238 aa8.62□□□□□ -1.03
TMC1-202ENST00000340019 RETREG2Q8NC44 543 aa8.62□□□□□ -1.03
TMC1-202ENST00000340019 NOC3LQ8WTT2 800 aaKnown RBP8.62□□□□□ -1.03
TMC1-202ENST00000340019 TMEM174Q8WUU8 243 aa8.62□□□□□ -1.03
TMC1-202ENST00000340019 PSPC1Q8WXF1 523 aaKnown RBP8.62□□□□□ -1.03
TMC1-202ENST00000340019 MTG1Q9BT17 334 aaPredicted RBP8.62□□□□□ -1.03
TMC1-202ENST00000340019 SRRTQ9BXP5 876 aaKnown RBP8.62□□□□□ -1.03
TMC1-202ENST00000340019 RNF39Q9H2S5 420 aa8.62□□□□□ -1.03
TMC1-202ENST00000340019 HMX1Q9NP08 348 aaPredicted RBP8.62□□□□□ -1.03
TMC1-202ENST00000340019 SETD4Q9NVD3 440 aa8.62□□□□□ -1.03
TMC1-202ENST00000340019 ZEB2O60315 1214 aa8.61□□□□□ -1.03
TMC1-202ENST00000340019 LAMTOR4Q0VGL1 99 aa8.61□□□□□ -1.03
TMC1-202ENST00000340019 NFIL3Q16649 462 aa8.61□□□□□ -1.03
TMC1-202ENST00000340019 TPD52L1Q16890 204 aaPredicted RBP8.61□□□□□ -1.03
TMC1-202ENST00000340019 HSP90AA4PQ58FG1 418 aa8.61□□□□□ -1.03
TMC1-202ENST00000340019 CXCL17Q6UXB2 119 aa8.61□□□□□ -1.03
TMC1-202ENST00000340019 TAS1R3Q7RTX0 852 aa8.61□□□□□ -1.03
TMC1-202ENST00000340019 MAP4K3Q8IVH8 894 aa8.61□□□□□ -1.03
TMC1-202ENST00000340019 SH3TC2Q8TF17 1288 aa8.61□□□□□ -1.03
TMC1-202ENST00000340019 TSG101Q99816 390 aa8.61□□□□□ -1.03
TMC1-202ENST00000340019 IKZF4Q9H2S9 585 aa8.61□□□□□ -1.03
TMC1-202ENST00000340019 TMEM206Q9H813 350 aa8.61□□□□□ -1.03
TMC1-202ENST00000340019 SUCLA2Q9P2R7 463 aaPredicted RBP8.61□□□□□ -1.03
TMC1-202ENST00000340019 TBX20Q9UMR3 447 aa8.61□□□□□ -1.03
TMC1-202ENST00000340019 DENND3A2RUS2 1198 aa8.61□□□□□ -1.03
TMC1-202ENST00000340019 LRRC10BA6NIK2 292 aa8.61□□□□□ -1.03
TMC1-202ENST00000340019 ADCY5O95622 1261 aa8.61□□□□□ -1.03
TMC1-202ENST00000340019 ABCD1P33897 745 aa8.61□□□□□ -1.03
TMC1-202ENST00000340019 CLCN3P51790 818 aa8.61□□□□□ -1.03
TMC1-202ENST00000340019 FANCCQ00597 558 aa8.61□□□□□ -1.03
TMC1-202ENST00000340019 FKBP3Q00688 224 aaKnown RBP8.61□□□□□ -1.03
TMC1-202ENST00000340019 KCNA10Q16322 511 aa8.61□□□□□ -1.03
TMC1-202ENST00000340019 TCP11X2Q5H9J9 407 aa8.61□□□□□ -1.03
TMC1-202ENST00000340019 CDCA2Q69YH5 1023 aaPredicted RBP8.61□□□□□ -1.03
TMC1-202ENST00000340019 METTL13Q8N6R0 699 aa8.61□□□□□ -1.03
TMC1-202ENST00000340019 EEF2KMTQ96G04 330 aa8.61□□□□□ -1.03
TMC1-202ENST00000340019 H0YCG3 227 aa8.6□□□□□ -1.03
TMC1-202ENST00000340019 ASAP2O43150 1006 aa8.6□□□□□ -1.03
TMC1-202ENST00000340019 CALUO43852 315 aaPredicted RBP8.6□□□□□ -1.03
TMC1-202ENST00000340019 ASGR1P07306 291 aa8.6□□□□□ -1.03
TMC1-202ENST00000340019 HSPA8P11142 646 aaKnown RBP8.6□□□□□ -1.03
TMC1-202ENST00000340019 DNM2P50570 870 aa8.6□□□□□ -1.03
TMC1-202ENST00000340019 NFRKBQ6P4R8 1299 aa8.6□□□□□ -1.03
TMC1-202ENST00000340019 PDLIM2Q96JY6 352 aa8.6□□□□□ -1.03
TMC1-202ENST00000340019 ACCSQ96QU6 501 aa8.6□□□□□ -1.03
TMC1-202ENST00000340019 NFKBIZQ9BYH8 718 aa8.6□□□□□ -1.03
TMC1-202ENST00000340019 GBP3Q9H0R5 595 aa8.6□□□□□ -1.03
TMC1-202ENST00000340019 AGPAT3Q9NRZ7 376 aa8.6□□□□□ -1.03
TMC1-202ENST00000340019 LIMA1Q9UHB6 759 aaKnown RBP8.6□□□□□ -1.03
TMC1-202ENST00000340019 KCNJ18B7U540 433 aa8.6□□□□□ -1.03
TMC1-202ENST00000340019 GJB1P08034 283 aa8.6□□□□□ -1.03
TMC1-202ENST00000340019 EEF1GP26641 437 aaKnown RBP8.6□□□□□ -1.03
TMC1-202ENST00000340019 ZNF75DP51815 510 aa8.6□□□□□ -1.03
TMC1-202ENST00000340019 SNRPFP62306 86 aaKnown RBP8.6□□□□□ -1.03
TMC1-202ENST00000340019 PLCB2Q00722 1185 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms