RNA–Protein interactions for RNA: ENST00000338910.8

PSPC1-201, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSPC1, Length 2,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-201ENST00000338910 UAP1Q16222 522 aaPredicted RBP20.41■□□□□ 0.86
PSPC1-201ENST00000338910 ZCWPW2Q504Y3 356 aa20.41■□□□□ 0.86
PSPC1-201ENST00000338910 OTOP1Q7RTM1 612 aa20.41■□□□□ 0.86
PSPC1-201ENST00000338910 CCDC50Q8IVM0 306 aa20.41■□□□□ 0.86
PSPC1-201ENST00000338910 USP38Q8NB14 1042 aa20.41■□□□□ 0.86
PSPC1-201ENST00000338910 CCPG1Q9ULG6 757 aa20.41■□□□□ 0.86
PSPC1-201ENST00000338910 SCP2P22307 547 aa20.4■□□□□ 0.86
PSPC1-201ENST00000338910 ERVK-9P63128 1117 aa20.4■□□□□ 0.86
PSPC1-201ENST00000338910 TNNC1P63316 161 aa20.4■□□□□ 0.86
PSPC1-201ENST00000338910 TDRD12Q587J7 1177 aaKnown RBP20.4■□□□□ 0.86
PSPC1-201ENST00000338910 LRCH2Q5VUJ6 765 aa20.4■□□□□ 0.86
PSPC1-201ENST00000338910 CACNA2D4Q7Z3S7 1137 aa20.4■□□□□ 0.86
PSPC1-201ENST00000338910 CPXCR1Q8N123 301 aa20.4■□□□□ 0.86
PSPC1-201ENST00000338910 REEP2Q9BRK0 252 aa20.4■□□□□ 0.86
PSPC1-201ENST00000338910 KLRC1P26715 233 aa20.39■□□□□ 0.86
PSPC1-201ENST00000338910 HOXA7P31268 230 aaPredicted RBP20.39■□□□□ 0.86
PSPC1-201ENST00000338910 ZNF844Q08AG5 666 aa20.39■□□□□ 0.86
PSPC1-201ENST00000338910 BIRC3Q13489 604 aa20.39■□□□□ 0.86
PSPC1-201ENST00000338910 BYSLQ13895 437 aaKnown RBP20.39■□□□□ 0.86
PSPC1-201ENST00000338910 TPH2Q8IWU9 490 aa20.39■□□□□ 0.86
PSPC1-201ENST00000338910 PIGOQ8TEQ8 1089 aa20.39■□□□□ 0.86
PSPC1-201ENST00000338910 TANGO6Q9C0B7 1094 aa20.39■□□□□ 0.86
PSPC1-201ENST00000338910 KIAA1683Q9H0B3 1180 aa20.39■□□□□ 0.86
PSPC1-201ENST00000338910 PACSIN2Q9UNF0 486 aaPredicted RBP20.39■□□□□ 0.86
PSPC1-201ENST00000338910 TLR2O60603 784 aa20.39■□□□□ 0.85
PSPC1-201ENST00000338910 PAEPP09466 180 aa20.39■□□□□ 0.85
PSPC1-201ENST00000338910 CASP5P51878 434 aa20.39■□□□□ 0.85
PSPC1-201ENST00000338910 MTMR2Q13614 643 aa20.39■□□□□ 0.85
PSPC1-201ENST00000338910 CEP55Q53EZ4 464 aa20.39■□□□□ 0.85
PSPC1-201ENST00000338910 OR2W6PQ8NHA6 318 aa20.39■□□□□ 0.85
PSPC1-201ENST00000338910 SEC16BQ96JE7 1060 aa20.39■□□□□ 0.85
PSPC1-201ENST00000338910 HAUS2Q9NVX0 235 aa20.39■□□□□ 0.85
PSPC1-201ENST00000338910 GPRC5DQ9NZD1 345 aa20.39■□□□□ 0.85
PSPC1-201ENST00000338910 TPX2Q9ULW0 747 aaKnown RBP20.39■□□□□ 0.85
PSPC1-201ENST00000338910 PITPNM2Q9BZ72 1349 aa20.39■□□□□ 0.85
PSPC1-201ENST00000338910 FRMD3A2A2Y4 597 aa20.38■□□□□ 0.85
PSPC1-201ENST00000338910 ARP10275 920 aa20.38■□□□□ 0.85
PSPC1-201ENST00000338910 EPS15P42566 896 aa20.38■□□□□ 0.85
PSPC1-201ENST00000338910 RNASE9P60153 205 aaKnown RBP20.38■□□□□ 0.85
PSPC1-201ENST00000338910 HLTFQ14527 1009 aaKnown RBP eCLIP20.38■□□□□ 0.85
PSPC1-201ENST00000338910 SLC9C1Q4G0N8 1177 aa20.38■□□□□ 0.85
PSPC1-201ENST00000338910 LACTB2Q53H82 288 aaPredicted RBP20.38■□□□□ 0.85
PSPC1-201ENST00000338910 CEP57Q86XR8 500 aa20.38■□□□□ 0.85
PSPC1-201ENST00000338910 LPAR1Q92633 364 aa20.38■□□□□ 0.85
PSPC1-201ENST00000338910 POLR3CQ9BUI4 534 aaPredicted RBP20.38■□□□□ 0.85
PSPC1-201ENST00000338910 BCAS3Q9H6U6 928 aa20.38■□□□□ 0.85
PSPC1-201ENST00000338910 COL4A3BPQ9Y5P4 624 aa20.38■□□□□ 0.85
PSPC1-201ENST00000338910 STK24Q9Y6E0 443 aa20.38■□□□□ 0.85
PSPC1-201ENST00000338910 RSPH10B2B2RC85 870 aa20.38■□□□□ 0.85
PSPC1-201ENST00000338910 ZBTB39O15060 712 aa20.38■□□□□ 0.85
PSPC1-201ENST00000338910 ZNF536O15090 1300 aa20.38■□□□□ 0.85
PSPC1-201ENST00000338910 WDR46O15213 610 aaKnown RBP20.38■□□□□ 0.85
PSPC1-201ENST00000338910 PSMD10O75832 226 aa20.38■□□□□ 0.85
PSPC1-201ENST00000338910 RSPH10BP0C881 870 aa20.38■□□□□ 0.85
PSPC1-201ENST00000338910 TMOD1P28289 359 aa20.38■□□□□ 0.85
PSPC1-201ENST00000338910 KCNMA1Q12791 1236 aa20.38■□□□□ 0.85
PSPC1-201ENST00000338910 XRCC4Q13426 336 aa20.38■□□□□ 0.85
PSPC1-201ENST00000338910 CUL1Q13616 776 aa20.38■□□□□ 0.85
PSPC1-201ENST00000338910 SFR1Q86XK3 245 aa20.38■□□□□ 0.85
PSPC1-201ENST00000338910 KLHL7Q8IXQ5 586 aa20.38■□□□□ 0.85
PSPC1-201ENST00000338910 HSD17B14Q9BPX1 270 aa20.38■□□□□ 0.85
PSPC1-201ENST00000338910 KCTD10Q9H3F6 313 aa20.38■□□□□ 0.85
PSPC1-201ENST00000338910 RABGAP1Q9Y3P9 1069 aa20.38■□□□□ 0.85
PSPC1-201ENST00000338910 GAS7O60861 476 aa20.37■□□□□ 0.85
PSPC1-201ENST00000338910 SLITRK3O94933 977 aa20.37■□□□□ 0.85
PSPC1-201ENST00000338910 SERPING1P05155 500 aa20.37■□□□□ 0.85
PSPC1-201ENST00000338910 ICAM1P05362 532 aa20.37■□□□□ 0.85
PSPC1-201ENST00000338910 LMNB1P20700 586 aa20.37■□□□□ 0.85
PSPC1-201ENST00000338910 SCTRP47872 440 aa20.37■□□□□ 0.85
PSPC1-201ENST00000338910 SYN2Q92777 582 aaPredicted RBP20.37■□□□□ 0.85
PSPC1-201ENST00000338910 LRRC45Q96CN5 670 aa20.37■□□□□ 0.85
PSPC1-201ENST00000338910 HOOK2Q96ED9 719 aa20.37■□□□□ 0.85
PSPC1-201ENST00000338910 DYDC2Q96IM9 177 aa20.37■□□□□ 0.85
PSPC1-201ENST00000338910 RUSC1Q9BVN2 902 aa20.37■□□□□ 0.85
PSPC1-201ENST00000338910 LUC7LQ9NQ29 371 aaKnown RBP20.37■□□□□ 0.85
PSPC1-201ENST00000338910 GGA3Q9NZ52 723 aa20.37■□□□□ 0.85
PSPC1-201ENST00000338910 BHMG1C9JSJ3 638 aaPredicted RBP20.37■□□□□ 0.85
PSPC1-201ENST00000338910 NFIBO00712 420 aa20.37■□□□□ 0.85
PSPC1-201ENST00000338910 SPP2Q13103 211 aa20.37■□□□□ 0.85
PSPC1-201ENST00000338910 DCAF15Q66K64 600 aa20.37■□□□□ 0.85
PSPC1-201ENST00000338910 RUFY4Q6ZNE9 571 aa20.37■□□□□ 0.85
PSPC1-201ENST00000338910 GPC2Q8N158 579 aa20.37■□□□□ 0.85
PSPC1-201ENST00000338910 SLC5A5Q92911 643 aa20.37■□□□□ 0.85
PSPC1-201ENST00000338910 WRNIP1Q96S55 665 aa20.37■□□□□ 0.85
PSPC1-201ENST00000338910 ZNF577Q9BSK1 485 aa20.37■□□□□ 0.85
PSPC1-201ENST00000338910 EHMT1Q9H9B1 1298 aa20.37■□□□□ 0.85
PSPC1-201ENST00000338910 SPON1Q9HCB6 807 aa20.37■□□□□ 0.85
PSPC1-201ENST00000338910 HOMER2Q9NSB8 354 aa20.37■□□□□ 0.85
PSPC1-201ENST00000338910 SFI1A8K8P3 1242 aa20.36■□□□□ 0.85
PSPC1-201ENST00000338910 CTNNA1P35221 906 aaKnown RBP20.36■□□□□ 0.85
PSPC1-201ENST00000338910 HIRAP54198 1017 aaPredicted RBP20.36■□□□□ 0.85
PSPC1-201ENST00000338910 PPP2R2AP63151 447 aa20.36■□□□□ 0.85
PSPC1-201ENST00000338910 ARMC9Q7Z3E5 817 aa20.36■□□□□ 0.85
PSPC1-201ENST00000338910 CACNA2D3Q8IZS8 1091 aa20.36■□□□□ 0.85
PSPC1-201ENST00000338910 TATDN2Q93075 761 aa20.36■□□□□ 0.85
PSPC1-201ENST00000338910 FHDC1Q9C0D6 1143 aaPredicted RBP20.36■□□□□ 0.85
PSPC1-201ENST00000338910 NLRC4Q9NPP4 1024 aa20.36■□□□□ 0.85
PSPC1-201ENST00000338910 CEP72Q9P209 647 aa20.36■□□□□ 0.85
PSPC1-201ENST00000338910 CNOT8Q9UFF9 292 aaKnown RBP20.36■□□□□ 0.85
PSPC1-201ENST00000338910 CES2O00748 559 aa20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms