RNA–Protein interactions for RNA: ENST00000338176.8

RAB28-203, Transcript of RAB28, member RAS oncogene family, humanhuman

TSL 3 BASIC

Gene RAB28, Length 1,787 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-203ENST00000338176 MTRQ99707 1265 aa23.36■■□□□ 1.33
RAB28-203ENST00000338176 ATP6V0A4Q9HBG4 840 aa23.36■■□□□ 1.33
RAB28-203ENST00000338176 ANKEF1Q9NU02 776 aa23.36■■□□□ 1.33
RAB28-203ENST00000338176 TMEM161AQ9NX61 479 aa23.36■■□□□ 1.33
RAB28-203ENST00000338176 KIF3AQ9Y496 699 aa23.36■■□□□ 1.33
RAB28-203ENST00000338176 PPME1Q9Y570 386 aa23.36■■□□□ 1.33
RAB28-203ENST00000338176 C5orf67F2Z3F1 127 aa23.35■■□□□ 1.33
RAB28-203ENST00000338176 RARRES1P49788 294 aa23.35■■□□□ 1.33
RAB28-203ENST00000338176 ORC2Q13416 577 aaPredicted RBP23.35■■□□□ 1.33
RAB28-203ENST00000338176 ALG13Q9NP73 1137 aaKnown RBP23.35■■□□□ 1.33
RAB28-203ENST00000338176 CUL9Q8IWT3 2517 aa23.35■■□□□ 1.33
RAB28-203ENST00000338176 H3BQV1 296 aa23.35■■□□□ 1.33
RAB28-203ENST00000338176 ATF7P17544 494 aaPredicted RBP23.35■■□□□ 1.33
RAB28-203ENST00000338176 CDC42EP1Q00587 391 aa23.35■■□□□ 1.33
RAB28-203ENST00000338176 IL17AQ16552 155 aa23.35■■□□□ 1.33
RAB28-203ENST00000338176 ECM1Q16610 540 aa23.35■■□□□ 1.33
RAB28-203ENST00000338176 LONRF3Q496Y0 759 aa23.35■■□□□ 1.33
RAB28-203ENST00000338176 FERMT3Q86UX7 667 aa23.35■■□□□ 1.33
RAB28-203ENST00000338176 ASAP3Q8TDY4 903 aa23.35■■□□□ 1.33
RAB28-203ENST00000338176 TUFT1Q9NNX1 390 aa23.35■■□□□ 1.33
RAB28-203ENST00000338176 USO1O60763 962 aaKnown RBP23.34■■□□□ 1.33
RAB28-203ENST00000338176 MAEAQ7L5Y9 396 aa23.34■■□□□ 1.33
RAB28-203ENST00000338176 CATSPER4Q7RTX7 472 aa23.34■■□□□ 1.33
RAB28-203ENST00000338176 RNF149Q8NC42 400 aa23.34■■□□□ 1.33
RAB28-203ENST00000338176 IL27Q8NEV9 243 aa23.34■■□□□ 1.33
RAB28-203ENST00000338176 ELAC1Q9H777 363 aaKnown RBP23.34■■□□□ 1.33
RAB28-203ENST00000338176 TYW1Q9NV66 732 aaKnown RBP23.34■■□□□ 1.33
RAB28-203ENST00000338176 PIN4Q9Y237 131 aaKnown RBP23.34■■□□□ 1.33
RAB28-203ENST00000338176 RB1P06400 928 aa23.33■■□□□ 1.33
RAB28-203ENST00000338176 SFPQP23246 707 aaKnown RBP eCLIP23.33■■□□□ 1.33
RAB28-203ENST00000338176 DNAJB1P25685 340 aa23.33■■□□□ 1.33
RAB28-203ENST00000338176 CLLU1OSQ5K130 101 aa23.33■■□□□ 1.33
RAB28-203ENST00000338176 KLHL23Q8NBE8 558 aa23.33■■□□□ 1.33
RAB28-203ENST00000338176 TCP11Q8WWU5 503 aa23.33■■□□□ 1.33
RAB28-203ENST00000338176 CCDC43Q96MW1 224 aaKnown RBP23.33■■□□□ 1.33
RAB28-203ENST00000338176 C11orf84Q9BUA3 381 aaPredicted RBP23.33■■□□□ 1.33
RAB28-203ENST00000338176 POLR3CQ9BUI4 534 aaPredicted RBP23.33■■□□□ 1.33
RAB28-203ENST00000338176 GPRC5CQ9NQ84 441 aa23.33■■□□□ 1.33
RAB28-203ENST00000338176 PP2D1A8MPX8 630 aa23.32■■□□□ 1.32
RAB28-203ENST00000338176 LRRC55Q6ZSA7 311 aa23.32■■□□□ 1.32
RAB28-203ENST00000338176 ZNF598Q86UK7 904 aaKnown RBP23.32■■□□□ 1.32
RAB28-203ENST00000338176 EXOC8Q8IYI6 725 aa23.32■■□□□ 1.32
RAB28-203ENST00000338176 ATXN2LQ8WWM7 1075 aaKnown RBP23.32■■□□□ 1.32
RAB28-203ENST00000338176 LPPQ93052 612 aa23.32■■□□□ 1.32
RAB28-203ENST00000338176 CASD1Q96PB1 797 aa23.32■■□□□ 1.32
RAB28-203ENST00000338176 ASB2Q96Q27 587 aa23.32■■□□□ 1.32
RAB28-203ENST00000338176 EIF4ENIF1Q9NRA8 985 aaKnown RBP23.32■■□□□ 1.32
RAB28-203ENST00000338176 RWDD3Q9Y3V2 267 aa23.32■■□□□ 1.32
RAB28-203ENST00000338176 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.32■■□□□ 1.32
RAB28-203ENST00000338176 TCF20Q9UGU0 1960 aaKnown RBP23.32■■□□□ 1.32
RAB28-203ENST00000338176 A0A0U1RQF3 1178 aa23.32■■□□□ 1.32
RAB28-203ENST00000338176 ITGB1P05556 798 aa23.32■■□□□ 1.32
RAB28-203ENST00000338176 RPA1P27694 616 aa23.32■■□□□ 1.32
RAB28-203ENST00000338176 FXR2P51116 673 aaKnown RBP eCLIP23.32■■□□□ 1.32
RAB28-203ENST00000338176 KCNQ1P51787 676 aa23.32■■□□□ 1.32
RAB28-203ENST00000338176 PTPROQ16827 1216 aa23.32■■□□□ 1.32
RAB28-203ENST00000338176 SPOUT1Q5T280 376 aaKnown RBP23.32■■□□□ 1.32
RAB28-203ENST00000338176 LARP1BQ659C4 914 aaKnown RBP23.32■■□□□ 1.32
RAB28-203ENST00000338176 TWF2Q6IBS0 349 aaKnown RBP23.32■■□□□ 1.32
RAB28-203ENST00000338176 INO80BQ9C086 356 aaPredicted RBP23.32■■□□□ 1.32
RAB28-203ENST00000338176 CWH43Q9H720 699 aa23.32■■□□□ 1.32
RAB28-203ENST00000338176 PLAGL2Q9UPG8 496 aa23.32■■□□□ 1.32
RAB28-203ENST00000338176 PLXNA4Q9HCM2 1894 aa23.31■■□□□ 1.32
RAB28-203ENST00000338176 MEIS3P2A8K0S8 358 aa23.31■■□□□ 1.32
RAB28-203ENST00000338176 GAS2O43903 313 aaKnown RBP23.31■■□□□ 1.32
RAB28-203ENST00000338176 DGAT1O75907 488 aa23.31■■□□□ 1.32
RAB28-203ENST00000338176 CDC25AP30304 524 aa23.31■■□□□ 1.32
RAB28-203ENST00000338176 ARL2P36404 184 aa23.31■■□□□ 1.32
RAB28-203ENST00000338176 MRPS5P82675 430 aaKnown RBP23.31■■□□□ 1.32
RAB28-203ENST00000338176 CUL4AQ13619 759 aa23.31■■□□□ 1.32
RAB28-203ENST00000338176 CAMK1Q14012 370 aa23.31■■□□□ 1.32
RAB28-203ENST00000338176 TCEAL5Q5H9L2 206 aa23.31■■□□□ 1.32
RAB28-203ENST00000338176 TJAP1Q5JTD0 557 aa23.31■■□□□ 1.32
RAB28-203ENST00000338176 FAM43BQ6ZT52 329 aaPredicted RBP23.31■■□□□ 1.32
RAB28-203ENST00000338176 HELQQ8TDG4 1101 aa23.31■■□□□ 1.32
RAB28-203ENST00000338176 POLR3FQ9H1D9 316 aaPredicted RBP23.31■■□□□ 1.32
RAB28-203ENST00000338176 LRWD1Q9UFC0 647 aa23.31■■□□□ 1.32
RAB28-203ENST00000338176 GLRA2P23416 452 aa23.3■■□□□ 1.32
RAB28-203ENST00000338176 CCT6AP40227 531 aaKnown RBP23.3■■□□□ 1.32
RAB28-203ENST00000338176 PHKA2P46019 1235 aa23.3■■□□□ 1.32
RAB28-203ENST00000338176 CAPSQ13938 189 aa23.3■■□□□ 1.32
RAB28-203ENST00000338176 ERMNQ8TAM6 284 aa23.3■■□□□ 1.32
RAB28-203ENST00000338176 TMEM117Q9H0C3 514 aa23.3■■□□□ 1.32
RAB28-203ENST00000338176 POLD4Q9HCU8 107 aa23.3■■□□□ 1.32
RAB28-203ENST00000338176 CHST12Q9NRB3 414 aa23.3■■□□□ 1.32
RAB28-203ENST00000338176 AGPAT5Q9NUQ2 364 aa23.3■■□□□ 1.32
RAB28-203ENST00000338176 DACT1Q9NYF0 836 aa23.3■■□□□ 1.32
RAB28-203ENST00000338176 XRCC6P12956 609 aaKnown RBP eCLIP23.29■■□□□ 1.32
RAB28-203ENST00000338176 PBX3P40426 434 aa23.29■■□□□ 1.32
RAB28-203ENST00000338176 SRGAP1Q7Z6B7 1085 aa23.29■■□□□ 1.32
RAB28-203ENST00000338176 SPPL3Q8TCT6 385 aa23.29■■□□□ 1.32
RAB28-203ENST00000338176 HLA-CQ95604 372 aa23.29■■□□□ 1.32
RAB28-203ENST00000338176 NACC1Q96RE7 527 aa23.29■■□□□ 1.32
RAB28-203ENST00000338176 PLVAPQ9BX97 442 aa23.29■■□□□ 1.32
RAB28-203ENST00000338176 ASAP2O43150 1006 aa23.29■■□□□ 1.32
RAB28-203ENST00000338176 HOXA11P31270 313 aaPredicted RBP23.29■■□□□ 1.32
RAB28-203ENST00000338176 IGSF22Q8N9C0 903 aa23.29■■□□□ 1.32
RAB28-203ENST00000338176 FOXD4L1Q9NU39 408 aa23.29■■□□□ 1.32
RAB28-203ENST00000338176 RNF216Q9NWF9 866 aaPredicted RBP23.29■■□□□ 1.32
RAB28-203ENST00000338176 DBR1Q9UK59 544 aaKnown RBP23.29■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms