RNA–Protein interactions for RNA: ENST00000334389.5

LINC00643-201, long intergenic non-protein coding RNA 643, humanhuman

TSL 2 BASIC

Gene LINC00643, Length 3,247 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-201ENST00000334389 FLRT2O43155 660 aa1.9□□□□□ -2.11
LINC00643-201ENST00000334389 KCNQ3O43525 872 aa1.9□□□□□ -2.11
LINC00643-201ENST00000334389 VCAM1P19320 739 aa1.9□□□□□ -2.11
LINC00643-201ENST00000334389 CYP2C18P33260 490 aa1.9□□□□□ -2.11
LINC00643-201ENST00000334389 ABCD1P33897 745 aa1.9□□□□□ -2.11
LINC00643-201ENST00000334389 PPP3CCP48454 512 aa1.9□□□□□ -2.11
LINC00643-201ENST00000334389 COMPP49747 757 aaPredicted RBP1.9□□□□□ -2.11
LINC00643-201ENST00000334389 CLCN4P51793 760 aa1.9□□□□□ -2.11
LINC00643-201ENST00000334389 IRX3P78415 501 aaPredicted RBP1.9□□□□□ -2.11
LINC00643-201ENST00000334389 RESTQ13127 1097 aa1.9□□□□□ -2.11
LINC00643-201ENST00000334389 DHX8Q14562 1220 aaKnown RBP1.9□□□□□ -2.11
LINC00643-201ENST00000334389 STPG1Q5TH74 334 aa1.9□□□□□ -2.11
LINC00643-201ENST00000334389 TOGARAM2Q6ZUX3 1019 aa1.9□□□□□ -2.11
LINC00643-201ENST00000334389 CAMKMTQ7Z624 323 aa1.9□□□□□ -2.11
LINC00643-201ENST00000334389 MRPL43Q8N983 215 aaKnown RBP1.9□□□□□ -2.11
LINC00643-201ENST00000334389 STAG1Q8WVM7 1258 aa1.9□□□□□ -2.11
LINC00643-201ENST00000334389 NANOS1Q8WY41 292 aaKnown RBP1.9□□□□□ -2.11
LINC00643-201ENST00000334389 OVCA2Q8WZ82 227 aa1.9□□□□□ -2.11
LINC00643-201ENST00000334389 RTF1Q92541 710 aaKnown RBP1.9□□□□□ -2.11
LINC00643-201ENST00000334389 GJA10Q969M2 543 aa1.9□□□□□ -2.11
LINC00643-201ENST00000334389 DEPDC7Q96QD5 511 aa1.9□□□□□ -2.11
LINC00643-201ENST00000334389 MTRQ99707 1265 aa1.9□□□□□ -2.11
LINC00643-201ENST00000334389 TTPALQ9BTX7 342 aa1.9□□□□□ -2.11
LINC00643-201ENST00000334389 EFHD1Q9BUP0 239 aa1.9□□□□□ -2.11
LINC00643-201ENST00000334389 DBNDD1Q9H9R9 158 aa1.9□□□□□ -2.11
LINC00643-201ENST00000334389 KCNQ5Q9NR82 932 aa1.9□□□□□ -2.11
LINC00643-201ENST00000334389 CHST7Q9NS84 486 aa1.9□□□□□ -2.11
LINC00643-201ENST00000334389 SEMA4GQ9NTN9 838 aa1.9□□□□□ -2.11
LINC00643-201ENST00000334389 BTBD7Q9P203 1132 aa1.9□□□□□ -2.11
LINC00643-201ENST00000334389 IL17BQ9UHF5 180 aa1.9□□□□□ -2.11
LINC00643-201ENST00000334389 FBXW11Q9UKB1 542 aa1.9□□□□□ -2.11
LINC00643-201ENST00000334389 CNPY2Q9Y2B0 182 aa1.9□□□□□ -2.11
LINC00643-201ENST00000334389 MYH6P13533 1939 aa1.9□□□□□ -2.11
LINC00643-201ENST00000334389 FASNP49327 2511 aaKnown RBP1.9□□□□□ -2.11
LINC00643-201ENST00000334389 NCOR2Q9Y618 2525 aa1.9□□□□□ -2.11
LINC00643-201ENST00000334389 CDRT15L2A8MXV6 281 aa1.9□□□□□ -2.11
LINC00643-201ENST00000334389 ADCY6O43306 1168 aa1.9□□□□□ -2.11
LINC00643-201ENST00000334389 ORC4O43929 436 aa1.9□□□□□ -2.11
LINC00643-201ENST00000334389 BAG3O95817 575 aa1.9□□□□□ -2.11
LINC00643-201ENST00000334389 ICAM1P05362 532 aa1.9□□□□□ -2.11
LINC00643-201ENST00000334389 ATP4AP20648 1035 aa1.9□□□□□ -2.11
LINC00643-201ENST00000334389 CANXP27824 592 aaKnown RBP1.9□□□□□ -2.11
LINC00643-201ENST00000334389 OXTRP30559 389 aa1.9□□□□□ -2.11
LINC00643-201ENST00000334389 AARSP49588 968 aaKnown RBP eCLIP1.9□□□□□ -2.11
LINC00643-201ENST00000334389 SOX8P57073 446 aa1.9□□□□□ -2.11
LINC00643-201ENST00000334389 DSG1Q02413 1049 aa1.9□□□□□ -2.11
LINC00643-201ENST00000334389 ADAM9Q13443 819 aa1.9□□□□□ -2.11
LINC00643-201ENST00000334389 FAM187BQ17R55 369 aa1.9□□□□□ -2.11
LINC00643-201ENST00000334389 COLEC12Q5KU26 742 aa1.9□□□□□ -2.11
LINC00643-201ENST00000334389 ABHD17BQ5VST6 288 aa1.9□□□□□ -2.11
LINC00643-201ENST00000334389 TSHZ3Q63HK5 1081 aa1.9□□□□□ -2.11
LINC00643-201ENST00000334389 RPUSD3Q6P087 351 aaKnown RBP1.9□□□□□ -2.11
LINC00643-201ENST00000334389 MTFR2Q6P444 385 aa1.9□□□□□ -2.11
LINC00643-201ENST00000334389 PAXIP1Q6ZW49 1069 aaPredicted RBP1.9□□□□□ -2.11
LINC00643-201ENST00000334389 TRMT11Q7Z4G4 463 aaKnown RBP1.9□□□□□ -2.11
LINC00643-201ENST00000334389 LRRC47Q8N1G4 583 aaKnown RBP1.9□□□□□ -2.11
LINC00643-201ENST00000334389 PTPRN2Q92932 1015 aa1.9□□□□□ -2.11
LINC00643-201ENST00000334389 FAXDC2Q96IV6 333 aa1.9□□□□□ -2.11
LINC00643-201ENST00000334389 CDHR1Q96JP9 859 aa1.9□□□□□ -2.11
LINC00643-201ENST00000334389 TTC14Q96N46 770 aa1.9□□□□□ -2.11
LINC00643-201ENST00000334389 ZNF287Q9HBT7 754 aa1.9□□□□□ -2.11
LINC00643-201ENST00000334389 ARHGEF3Q9NR81 526 aa1.9□□□□□ -2.11
LINC00643-201ENST00000334389 GEMIN8Q9NWZ8 242 aaKnown RBP1.9□□□□□ -2.11
LINC00643-201ENST00000334389 MBD1Q9UIS9 605 aaPredicted RBP1.9□□□□□ -2.11
LINC00643-201ENST00000334389 ATXN7L1Q9ULK2 861 aaPredicted RBP1.9□□□□□ -2.11
LINC00643-201ENST00000334389 TBC1D2BQ9UPU7 963 aa1.9□□□□□ -2.11
LINC00643-201ENST00000334389 MORC2Q9Y6X9 1032 aaPredicted RBP1.9□□□□□ -2.11
LINC00643-201ENST00000334389 A0A1W2PQ72 361 aa1.89□□□□□ -2.11
LINC00643-201ENST00000334389 C2orf71A6NGG8 1288 aa1.89□□□□□ -2.11
LINC00643-201ENST00000334389 K7ENP7 123 aa1.89□□□□□ -2.11
LINC00643-201ENST00000334389 PCDH17O14917 1159 aa1.89□□□□□ -2.11
LINC00643-201ENST00000334389 NBNO60934 754 aa1.89□□□□□ -2.11
LINC00643-201ENST00000334389 GH1P01241 217 aa1.89□□□□□ -2.11
LINC00643-201ENST00000334389 CYP2E1P05181 493 aaPredicted RBP1.89□□□□□ -2.11
LINC00643-201ENST00000334389 ASGR1P07306 291 aa1.89□□□□□ -2.11
LINC00643-201ENST00000334389 CA3P07451 260 aa1.89□□□□□ -2.11
LINC00643-201ENST00000334389 MMP3P08254 477 aa1.89□□□□□ -2.11
LINC00643-201ENST00000334389 GNAT2P19087 354 aa1.89□□□□□ -2.11
LINC00643-201ENST00000334389 DRD1P21728 446 aa1.89□□□□□ -2.11
LINC00643-201ENST00000334389 ARHGAP1Q07960 439 aa1.89□□□□□ -2.11
LINC00643-201ENST00000334389 TTF1Q15361 905 aaPredicted RBP1.89□□□□□ -2.11
LINC00643-201ENST00000334389 DUOXA1Q1HG43 343 aa1.89□□□□□ -2.11
LINC00643-201ENST00000334389 TPGS2Q68CL5 300 aa1.89□□□□□ -2.11
LINC00643-201ENST00000334389 INO80CQ6PI98 192 aaPredicted RBP1.89□□□□□ -2.11
LINC00643-201ENST00000334389 PRSS57Q6UWY2 283 aa1.89□□□□□ -2.11
LINC00643-201ENST00000334389 NFXL1Q6ZNB6 911 aa1.89□□□□□ -2.11
LINC00643-201ENST00000334389 HS6ST3Q8IZP7 471 aa1.89□□□□□ -2.11
LINC00643-201ENST00000334389 RELTQ969Z4 430 aa1.89□□□□□ -2.11
LINC00643-201ENST00000334389 CCDC127Q96BQ5 260 aa1.89□□□□□ -2.11
LINC00643-201ENST00000334389 NSUN4Q96CB9 384 aaKnown RBP1.89□□□□□ -2.11
LINC00643-201ENST00000334389 MOCOSQ96EN8 888 aa1.89□□□□□ -2.11
LINC00643-201ENST00000334389 PHOX2BQ99453 314 aa1.89□□□□□ -2.11
LINC00643-201ENST00000334389 HNRNPABQ99729 332 aaKnown RBP1.89□□□□□ -2.11
LINC00643-201ENST00000334389 C16orf70Q9BSU1 422 aa1.89□□□□□ -2.11
LINC00643-201ENST00000334389 EMILIN2Q9BXX0 1053 aa1.89□□□□□ -2.11
LINC00643-201ENST00000334389 AP5M1Q9H0R1 490 aa1.89□□□□□ -2.11
LINC00643-201ENST00000334389 GLT8D2Q9H1C3 349 aa1.89□□□□□ -2.11
LINC00643-201ENST00000334389 TMEM206Q9H813 350 aa1.89□□□□□ -2.11
LINC00643-201ENST00000334389 ACAD9Q9H845 621 aa1.89□□□□□ -2.11
LINC00643-201ENST00000334389 TXNRD2Q9NNW7 524 aa1.89□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms