RNA–Protein interactions for RNA: ENST00000330374.6

VMA21-201, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMA21, Length 4,717 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-201ENST00000330374 TBK1Q9UHD2 729 aa8.52□□□□□ -1.04
VMA21-201ENST00000330374 EVI5O60447 810 aa8.52□□□□□ -1.05
VMA21-201ENST00000330374 GCNT3O95395 438 aa8.52□□□□□ -1.05
VMA21-201ENST00000330374 BAG3O95817 575 aa8.52□□□□□ -1.05
VMA21-201ENST00000330374 GNA14O95837 355 aa8.52□□□□□ -1.05
VMA21-201ENST00000330374 MARCKSL1P49006 195 aa8.52□□□□□ -1.05
VMA21-201ENST00000330374 PLS1Q14651 629 aa8.52□□□□□ -1.05
VMA21-201ENST00000330374 ZNF746Q6NUN9 644 aaPredicted RBP8.52□□□□□ -1.05
VMA21-201ENST00000330374 SEPT14Q6ZU15 432 aa8.52□□□□□ -1.05
VMA21-201ENST00000330374 SLC17A8Q8NDX2 589 aa8.52□□□□□ -1.05
VMA21-201ENST00000330374 ERP44Q9BS26 406 aa8.52□□□□□ -1.05
VMA21-201ENST00000330374 MKNK1Q9BUB5 465 aa8.52□□□□□ -1.05
VMA21-201ENST00000330374 KIF9Q9HAQ2 790 aa8.52□□□□□ -1.05
VMA21-201ENST00000330374 CCDC169A6NNP5 214 aa8.52□□□□□ -1.05
VMA21-201ENST00000330374 CYP11B2P19099 503 aa8.52□□□□□ -1.05
VMA21-201ENST00000330374 TMEM119Q4V9L6 283 aa8.52□□□□□ -1.05
VMA21-201ENST00000330374 TLDC1Q6P9B6 456 aa8.52□□□□□ -1.05
VMA21-201ENST00000330374 KCTD1Q719H9 257 aa8.52□□□□□ -1.05
VMA21-201ENST00000330374 FMNL3Q8IVF7 1028 aa8.52□□□□□ -1.05
VMA21-201ENST00000330374 TLCD1Q96CP7 247 aa8.52□□□□□ -1.05
VMA21-201ENST00000330374 LZTS2Q9BRK4 669 aa8.52□□□□□ -1.05
VMA21-201ENST00000330374 KCTD10Q9H3F6 313 aa8.52□□□□□ -1.05
VMA21-201ENST00000330374 BCL9O00512 1426 aa8.52□□□□□ -1.05
VMA21-201ENST00000330374 TOGARAM1Q9Y4F4 1720 aa8.52□□□□□ -1.05
VMA21-201ENST00000330374 C6orf229H3BNL8 230 aa8.52□□□□□ -1.05
VMA21-201ENST00000330374 BTDP43251 543 aa8.52□□□□□ -1.05
VMA21-201ENST00000330374 VPS41P49754 854 aa8.52□□□□□ -1.05
VMA21-201ENST00000330374 HSPA2P54652 639 aa8.52□□□□□ -1.05
VMA21-201ENST00000330374 SNAP25P60880 206 aa8.52□□□□□ -1.05
VMA21-201ENST00000330374 KIAA1755Q5JYT7 1200 aa8.52□□□□□ -1.05
VMA21-201ENST00000330374 ERICH1Q86X53 443 aa8.52□□□□□ -1.05
VMA21-201ENST00000330374 PALB2Q86YC2 1186 aa8.52□□□□□ -1.05
VMA21-201ENST00000330374 SYCE1Q8N0S2 351 aa8.52□□□□□ -1.05
VMA21-201ENST00000330374 LNX1Q8TBB1 728 aaPredicted RBP8.52□□□□□ -1.05
VMA21-201ENST00000330374 ATXN2LQ8WWM7 1075 aaKnown RBP8.52□□□□□ -1.05
VMA21-201ENST00000330374 YIPF3Q9GZM5 350 aa8.52□□□□□ -1.05
VMA21-201ENST00000330374 THAP2Q9H0W7 228 aa8.52□□□□□ -1.05
VMA21-201ENST00000330374 PABPC3Q9H361 631 aaKnown RBP8.52□□□□□ -1.05
VMA21-201ENST00000330374 SUCLA2Q9P2R7 463 aaPredicted RBP8.52□□□□□ -1.05
VMA21-201ENST00000330374 MPHOSPH10O00566 681 aaKnown RBP8.51□□□□□ -1.05
VMA21-201ENST00000330374 PEX14O75381 377 aa8.51□□□□□ -1.05
VMA21-201ENST00000330374 MED24O75448 989 aa8.51□□□□□ -1.05
VMA21-201ENST00000330374 PAEPP09466 180 aa8.51□□□□□ -1.05
VMA21-201ENST00000330374 STAT1P42224 750 aa8.51□□□□□ -1.05
VMA21-201ENST00000330374 TRIP13Q15645 432 aaPredicted RBP8.51□□□□□ -1.05
VMA21-201ENST00000330374 CCDC105Q8IYK2 499 aa8.51□□□□□ -1.05
VMA21-201ENST00000330374 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.51□□□□□ -1.05
VMA21-201ENST00000330374 ALG3Q92685 438 aa8.51□□□□□ -1.05
VMA21-201ENST00000330374 POP1Q99575 1024 aaKnown RBP8.51□□□□□ -1.05
VMA21-201ENST00000330374 ADAM7Q9H2U9 754 aa8.51□□□□□ -1.05
VMA21-201ENST00000330374 ZNF652Q9Y2D9 606 aa8.51□□□□□ -1.05
VMA21-201ENST00000330374 C15orf41Q9Y2V0 281 aa8.51□□□□□ -1.05
VMA21-201ENST00000330374 A0A1B0GUL6 1792 aa8.51□□□□□ -1.05
VMA21-201ENST00000330374 SRRM3A6NNA2 597 aaPredicted RBP8.51□□□□□ -1.05
VMA21-201ENST00000330374 RASGRF2O14827 1237 aa8.51□□□□□ -1.05
VMA21-201ENST00000330374 ATMINO43313 823 aaPredicted RBP8.51□□□□□ -1.05
VMA21-201ENST00000330374 PPFIA2O75334 1257 aa8.51□□□□□ -1.05
VMA21-201ENST00000330374 TRIM49P0CI25 452 aa8.51□□□□□ -1.05
VMA21-201ENST00000330374 TRIM49CP0CI26 452 aa8.51□□□□□ -1.05
VMA21-201ENST00000330374 EIF3BP55884 814 aaKnown RBP8.51□□□□□ -1.05
VMA21-201ENST00000330374 PDIA5Q14554 519 aa8.51□□□□□ -1.05
VMA21-201ENST00000330374 C3orf20Q8ND61 904 aa8.51□□□□□ -1.05
VMA21-201ENST00000330374 KRT35Q92764 455 aa8.51□□□□□ -1.05
VMA21-201ENST00000330374 DDX23Q9BUQ8 820 aaKnown RBP8.51□□□□□ -1.05
VMA21-201ENST00000330374 EPB41L4BQ9H329 900 aa8.51□□□□□ -1.05
VMA21-201ENST00000330374 CTTNBP2NLQ9P2B4 639 aa8.51□□□□□ -1.05
VMA21-201ENST00000330374 CTNNAL1Q9UBT7 734 aa8.51□□□□□ -1.05
VMA21-201ENST00000330374 CCDC88AQ3V6T2 1871 aa8.51□□□□□ -1.05
VMA21-201ENST00000330374 KRT16P08779 473 aa8.51□□□□□ -1.05
VMA21-201ENST00000330374 NQO1P15559 274 aaKnown RBP8.51□□□□□ -1.05
VMA21-201ENST00000330374 TAL1P17542 331 aaPredicted RBP8.51□□□□□ -1.05
VMA21-201ENST00000330374 RPL21P46778 160 aaKnown RBP8.51□□□□□ -1.05
VMA21-201ENST00000330374 SNX1Q13596 522 aa8.51□□□□□ -1.05
VMA21-201ENST00000330374 MESDQ14696 234 aa8.51□□□□□ -1.05
VMA21-201ENST00000330374 TRMT1LQ7Z2T5 733 aaKnown RBP8.51□□□□□ -1.05
VMA21-201ENST00000330374 CPNE8Q86YQ8 564 aa8.51□□□□□ -1.05
VMA21-201ENST00000330374 PPP1R12CQ9BZL4 782 aa8.51□□□□□ -1.05
VMA21-201ENST00000330374 NSRP1Q9H0G5 558 aaKnown RBP8.51□□□□□ -1.05
VMA21-201ENST00000330374 GHRP10912 638 aa8.51□□□□□ -1.05
VMA21-201ENST00000330374 TNFAIP3P21580 790 aa8.51□□□□□ -1.05
VMA21-201ENST00000330374 CYP2J2P51589 502 aa8.51□□□□□ -1.05
VMA21-201ENST00000330374 PRR16Q569H4 304 aa8.51□□□□□ -1.05
VMA21-201ENST00000330374 ARSHQ5FYA8 562 aa8.51□□□□□ -1.05
VMA21-201ENST00000330374 FAM47EQ6ZV65 393 aa8.51□□□□□ -1.05
VMA21-201ENST00000330374 NBPF5PQ86XG9 351 aaPredicted RBP8.51□□□□□ -1.05
VMA21-201ENST00000330374 SRP68Q9UHB9 627 aaKnown RBP8.51□□□□□ -1.05
VMA21-201ENST00000330374 TRPC6Q9Y210 931 aa8.51□□□□□ -1.05
VMA21-201ENST00000330374 BZW2Q9Y6E2 419 aaKnown RBP8.51□□□□□ -1.05
VMA21-201ENST00000330374 ANKRD63C9JTQ0 380 aa8.5□□□□□ -1.05
VMA21-201ENST00000330374 NR3C1P04150 777 aa8.5□□□□□ -1.05
VMA21-201ENST00000330374 NCALDP61601 193 aa8.5□□□□□ -1.05
VMA21-201ENST00000330374 RNASELQ05823 741 aaKnown RBP8.5□□□□□ -1.05
VMA21-201ENST00000330374 DRAP1Q14919 205 aaPredicted RBP8.5□□□□□ -1.05
VMA21-201ENST00000330374 C10orf76Q5T2E6 689 aa8.5□□□□□ -1.05
VMA21-201ENST00000330374 TBC1D9BQ66K14 1250 aa8.5□□□□□ -1.05
VMA21-201ENST00000330374 DPP8Q6V1X1 898 aaPredicted RBP8.5□□□□□ -1.05
VMA21-201ENST00000330374 BZW1Q7L1Q6 419 aaKnown RBP8.5□□□□□ -1.05
VMA21-201ENST00000330374 HES6Q96HZ4 224 aa8.5□□□□□ -1.05
VMA21-201ENST00000330374 BTBD6Q96KE9 485 aa8.5□□□□□ -1.05
VMA21-201ENST00000330374 REEP2Q9BRK0 252 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms