RNA–Protein interactions for RNA: ENST00000329629.8

FNDC1-202, Transcript of fibronectin type III domain containing 1, humanhuman

TSL 1 (best)

Gene FNDC1, Length 6,034 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC1-202ENST00000329629 KRT14P02533 472 aa15.06■□□□□ 0
FNDC1-202ENST00000329629 SNAP25P60880 206 aa15.06■□□□□ 0
FNDC1-202ENST00000329629 NBPF9Q3BBW0 867 aa15.06■□□□□ 0
FNDC1-202ENST00000329629 TBC1D9BQ66K14 1250 aa15.06■□□□□ 0
FNDC1-202ENST00000329629 NAF1Q96HR8 494 aaKnown RBP15.06■□□□□ 0
FNDC1-202ENST00000329629 ABHD10Q9NUJ1 306 aa15.06■□□□□ 0
FNDC1-202ENST00000329629 RNF181Q9P0P0 153 aa15.06■□□□□ 0
FNDC1-202ENST00000329629 SUGT1Q9Y2Z0 365 aa15.06■□□□□ 0
FNDC1-202ENST00000329629 CCDC188H7C350 402 aa15.06■□□□□ 0
FNDC1-202ENST00000329629 KRT33BQ14525 404 aa15.06■□□□□ 0
FNDC1-202ENST00000329629 RHOT2Q8IXI1 618 aa15.06■□□□□ 0
FNDC1-202ENST00000329629 STAP2Q9UGK3 403 aa15.06■□□□□ 0
FNDC1-202ENST00000329629 LRFN2Q9ULH4 789 aa15.06■□□□□ 0
FNDC1-202ENST00000329629 AXIN2Q9Y2T1 843 aa15.06■□□□□ 0
FNDC1-202ENST00000329629 TBCCQ15814 346 aa15.06■□□□□ 0
FNDC1-202ENST00000329629 ARHGEF1Q92888 912 aaKnown RBP15.06■□□□□ 0
FNDC1-202ENST00000329629 BTBD6Q96KE9 485 aa15.06■□□□□ 0
FNDC1-202ENST00000329629 TTC25Q96NG3 672 aa15.06■□□□□ 0
FNDC1-202ENST00000329629 NDE1Q9NXR1 346 aa15.06■□□□□ 0
FNDC1-202ENST00000329629 MYO3BQ8WXR4 1341 aa15.06■□□□□ 0
FNDC1-202ENST00000329629 TRIM49BA6NDI0 452 aa15.05■□□□□ 0
FNDC1-202ENST00000329629 KDM1AO60341 852 aa15.05■□□□□ 0
FNDC1-202ENST00000329629 ECE2O60344 883 aa15.05■□□□□ 0
FNDC1-202ENST00000329629 USP17L2Q6R6M4 530 aa15.05■□□□□ 0
FNDC1-202ENST00000329629 GDAQ9Y2T3 454 aa15.05■□□□□ 0
FNDC1-202ENST00000329629 TMEM247A6NEH6 219 aa15.05■□□□□ 0
FNDC1-202ENST00000329629 PYGLP06737 847 aa15.05■□□□□ 0
FNDC1-202ENST00000329629 HNRNPCP07910 306 aaKnown RBP eCLIP15.05■□□□□ 0
FNDC1-202ENST00000329629 GCFC2P16383 781 aaKnown RBP15.05■□□□□ 0
FNDC1-202ENST00000329629 TXNRD1Q16881 649 aa15.05■□□□□ 0
FNDC1-202ENST00000329629 TTC30BQ8N4P2 665 aa15.05■□□□□ 0
FNDC1-202ENST00000329629 SLC26A7Q8TE54 656 aa15.05■□□□□ 0
FNDC1-202ENST00000329629 ESYT3A0FGR9 886 aa15.05■□□□□ -0
FNDC1-202ENST00000329629 EFTUD2Q15029 972 aaKnown RBP eCLIP15.05■□□□□ -0
FNDC1-202ENST00000329629 RASSF3Q86WH2 238 aa15.05■□□□□ -0
FNDC1-202ENST00000329629 SYNE4Q8N205 404 aa15.05■□□□□ -0
FNDC1-202ENST00000329629 DDX28Q9NUL7 540 aaKnown RBP15.05■□□□□ -0
FNDC1-202ENST00000329629 TRIM33Q9UPN9 1127 aa15.05■□□□□ -0
FNDC1-202ENST00000329629 KPNA7A9QM74 516 aa15.05■□□□□ -0
FNDC1-202ENST00000329629 MYCP01106 439 aaPredicted RBP15.05■□□□□ -0
FNDC1-202ENST00000329629 MORF4L2Q15014 288 aa15.05■□□□□ -0
FNDC1-202ENST00000329629 IMPG1Q17R60 797 aa15.05■□□□□ -0
FNDC1-202ENST00000329629 RNF139Q8WU17 664 aa15.05■□□□□ -0
FNDC1-202ENST00000329629 MSTO1Q9BUK6 570 aa15.05■□□□□ -0
FNDC1-202ENST00000329629 EDEM3Q9BZQ6 932 aa15.05■□□□□ -0
FNDC1-202ENST00000329629 NEUROG2Q9H2A3 272 aa15.05■□□□□ -0
FNDC1-202ENST00000329629 DNAJC12Q9UKB3 198 aa15.05■□□□□ -0
FNDC1-202ENST00000329629 CRB1P82279 1406 aa15.05■□□□□ -0
FNDC1-202ENST00000329629 ALKQ9UM73 1620 aa15.05■□□□□ -0
FNDC1-202ENST00000329629 SEC24DO94855 1032 aaPredicted RBP15.05■□□□□ -0
FNDC1-202ENST00000329629 CCDC159P0C7I6 412 aa15.05■□□□□ -0
FNDC1-202ENST00000329629 ZNF211Q13398 564 aaPredicted RBP15.05■□□□□ -0
FNDC1-202ENST00000329629 ARL13BQ3SXY8 428 aa15.05■□□□□ -0
FNDC1-202ENST00000329629 ZNF394Q53GI3 561 aa15.05■□□□□ -0
FNDC1-202ENST00000329629 NBPF10Q6P3W6 841 aaKnown RBP15.05■□□□□ -0
FNDC1-202ENST00000329629 NFRKBQ6P4R8 1299 aa15.05■□□□□ -0
FNDC1-202ENST00000329629 ETNK1Q9HBU6 452 aa15.05■□□□□ -0
FNDC1-202ENST00000329629 NGRNQ9NPE2 291 aaKnown RBP15.05■□□□□ -0
FNDC1-202ENST00000329629 ATP8B3O60423 1300 aa15.04■□□□□ -0
FNDC1-202ENST00000329629 SUPT3HO75486 399 aa15.04■□□□□ -0
FNDC1-202ENST00000329629 ARFIP2P53365 341 aa15.04■□□□□ -0
FNDC1-202ENST00000329629 PI16Q6UXB8 463 aa15.04■□□□□ -0
FNDC1-202ENST00000329629 FOXP4Q8IVH2 680 aaPredicted RBP15.04■□□□□ -0
FNDC1-202ENST00000329629 KIAA2013Q8IYS2 634 aa15.04■□□□□ -0
FNDC1-202ENST00000329629 DYNLL2Q96FJ2 89 aa15.04■□□□□ -0
FNDC1-202ENST00000329629 VPS39Q96JC1 886 aa15.04■□□□□ -0
FNDC1-202ENST00000329629 PUS7LQ9H0K6 701 aaKnown RBP15.04■□□□□ -0
FNDC1-202ENST00000329629 SYNGAP1Q96PV0 1343 aa15.04■□□□□ -0
FNDC1-202ENST00000329629 CRKP46108 304 aa15.04■□□□□ -0
FNDC1-202ENST00000329629 PTPN12Q05209 780 aaKnown RBP15.04■□□□□ -0
FNDC1-202ENST00000329629 LRRC63Q05C16 580 aa15.04■□□□□ -0
FNDC1-202ENST00000329629 CCNYL1Q8N7R7 359 aa15.04■□□□□ -0
FNDC1-202ENST00000329629 ARL8AQ96BM9 186 aa15.04■□□□□ -0
FNDC1-202ENST00000329629 RPF1Q9H9Y2 349 aaKnown RBP15.04■□□□□ -0
FNDC1-202ENST00000329629 KLHL8Q9P2G9 620 aaPredicted RBP15.04■□□□□ -0
FNDC1-202ENST00000329629 TSR3Q9UJK0 312 aaKnown RBP15.04■□□□□ -0
FNDC1-202ENST00000329629 ZNF229Q9UJW7 825 aa15.04■□□□□ -0
FNDC1-202ENST00000329629 HEY1Q9Y5J3 304 aa15.04■□□□□ -0
FNDC1-202ENST00000329629 IQGAP3Q86VI3 1631 aa15.04■□□□□ -0
FNDC1-202ENST00000329629 SRGAP2CP0DJJ0 459 aa15.04■□□□□ -0
FNDC1-202ENST00000329629 ANXA13P27216 316 aa15.04■□□□□ -0
FNDC1-202ENST00000329629 CUL4AQ13619 759 aa15.04■□□□□ -0
FNDC1-202ENST00000329629 ANO5Q75V66 913 aa15.04■□□□□ -0
FNDC1-202ENST00000329629 ADGRB3O60242 1522 aa15.04■□□□□ -0
FNDC1-202ENST00000329629 LRRC53A6NM62 1247 aa15.04■□□□□ -0
FNDC1-202ENST00000329629 EEPD1Q7L9B9 569 aa15.04■□□□□ -0
FNDC1-202ENST00000329629 FAM160B2Q86V87 743 aa15.04■□□□□ -0
FNDC1-202ENST00000329629 CNOT8Q9UFF9 292 aaKnown RBP15.04■□□□□ -0
FNDC1-202ENST00000329629 PRPF3O43395 683 aaKnown RBP15.04■□□□□ -0
FNDC1-202ENST00000329629 CASP1P29466 404 aa15.04■□□□□ -0
FNDC1-202ENST00000329629 PAPOLAP51003 745 aaKnown RBP15.04■□□□□ -0
FNDC1-202ENST00000329629 HDAC4P56524 1084 aa15.04■□□□□ -0
FNDC1-202ENST00000329629 TEDDM1Q5T9Z0 273 aa15.04■□□□□ -0
FNDC1-202ENST00000329629 CAPRIN2Q6IMN6 1127 aaKnown RBP15.04■□□□□ -0
FNDC1-202ENST00000329629 PRPF38AQ8NAV1 312 aaKnown RBP15.04■□□□□ -0
FNDC1-202ENST00000329629 LMCD1Q9NZU5 365 aa15.04■□□□□ -0
FNDC1-202ENST00000329629 HDAC6Q9UBN7 1215 aa15.04■□□□□ -0
FNDC1-202ENST00000329629 TRAF3IP3Q9Y228 551 aa15.04■□□□□ -0
FNDC1-202ENST00000329629 ITM2BQ9Y287 266 aa15.04■□□□□ -0
FNDC1-202ENST00000329629 CDC42BPAQ5VT25 1732 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms