RNA–Protein interactions for RNA: ENST00000324771.12

DDR1-223, Transcript of discoidin domain receptor tyrosine kinase 1, human

APPRIS ALT2 TSL 5 BASIC

Gene DDR1, Length 4,148 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-223	ENST00000324771	HSPBP1	Q9NZL4	362 aa		12.76	□□□□□ -0.37
DDR1-223	ENST00000324771	MAGED2	Q9UNF1	606 aa	Predicted RBP	12.76	□□□□□ -0.37
DDR1-223	ENST00000324771	GAK	O14976	1311 aa		12.75	□□□□□ -0.37
DDR1-223	ENST00000324771	CHD2	O14647	1828 aa	Known RBP	12.75	□□□□□ -0.37
DDR1-223	ENST00000324771	TISP43	B9A030	160 aa		12.75	□□□□□ -0.37
DDR1-223	ENST00000324771	AKAP3	O75969	853 aa		12.75	□□□□□ -0.37
DDR1-223	ENST00000324771	PGK2	P07205	417 aa		12.75	□□□□□ -0.37
DDR1-223	ENST00000324771	OSBP	P22059	807 aa		12.75	□□□□□ -0.37
DDR1-223	ENST00000324771	ZBTB16	Q05516	673 aa		12.75	□□□□□ -0.37
DDR1-223	ENST00000324771	SGO2	Q562F6	1265 aa		12.75	□□□□□ -0.37
DDR1-223	ENST00000324771	CCDC89	Q8N998	374 aa		12.75	□□□□□ -0.37
DDR1-223	ENST00000324771	MCPH1	Q8NEM0	835 aa		12.75	□□□□□ -0.37
DDR1-223	ENST00000324771	SPATA4	Q8NEY3	305 aa		12.75	□□□□□ -0.37
DDR1-223	ENST00000324771	CALN1	Q9BXU9	219 aa		12.75	□□□□□ -0.37
DDR1-223	ENST00000324771	LRRD1	A4D1F6	860 aa		12.75	□□□□□ -0.37
DDR1-223	ENST00000324771	ABL1	P00519	1130 aa		12.75	□□□□□ -0.37
DDR1-223	ENST00000324771	GIT2	Q14161	759 aa		12.75	□□□□□ -0.37
DDR1-223	ENST00000324771	RNF25	Q96BH1	459 aa	Predicted RBP	12.75	□□□□□ -0.37
DDR1-223	ENST00000324771	RAB20	Q9NX57	234 aa		12.75	□□□□□ -0.37
DDR1-223	ENST00000324771	AMACR	Q9UHK6	382 aa		12.75	□□□□□ -0.37
DDR1-223	ENST00000324771	CAPN6	Q9Y6Q1	641 aa		12.75	□□□□□ -0.37
DDR1-223	ENST00000324771	PPAN-P2RY11	A0A0B4J1V8	794 aa	Predicted RBP	12.75	□□□□□ -0.37
DDR1-223	ENST00000324771		H0YCG3	227 aa		12.75	□□□□□ -0.37
DDR1-223	ENST00000324771	FMO5	P49326	533 aa		12.75	□□□□□ -0.37
DDR1-223	ENST00000324771	MNAT1	P51948	309 aa		12.75	□□□□□ -0.37
DDR1-223	ENST00000324771	GALC	P54803	685 aa		12.75	□□□□□ -0.37
DDR1-223	ENST00000324771	MTM1	Q13496	603 aa		12.75	□□□□□ -0.37
DDR1-223	ENST00000324771	CCDC121	Q6ZUS5	278 aa		12.75	□□□□□ -0.37
DDR1-223	ENST00000324771	SYT2	Q8N9I0	419 aa	Predicted RBP	12.75	□□□□□ -0.37
DDR1-223	ENST00000324771	SPATA33	Q96N06	139 aa		12.75	□□□□□ -0.37
DDR1-223	ENST00000324771	FAM118B	Q9BPY3	351 aa		12.75	□□□□□ -0.37
DDR1-223	ENST00000324771	STIM2	Q9P246	746 aa		12.75	□□□□□ -0.37
DDR1-223	ENST00000324771	VCAM1	P19320	739 aa		12.74	□□□□□ -0.37
DDR1-223	ENST00000324771	CCNA1	P78396	465 aa		12.74	□□□□□ -0.37
DDR1-223	ENST00000324771	MAPK6	Q16659	721 aa		12.74	□□□□□ -0.37
DDR1-223	ENST00000324771	CENPP	Q6IPU0	288 aa		12.74	□□□□□ -0.37
DDR1-223	ENST00000324771	RUFY4	Q6ZNE9	571 aa		12.74	□□□□□ -0.37
DDR1-223	ENST00000324771	HAS1	Q92839	578 aa		12.74	□□□□□ -0.37
DDR1-223	ENST00000324771	ADAM22	Q9P0K1	906 aa		12.74	□□□□□ -0.37
DDR1-223	ENST00000324771	PNMA2	Q9UL42	364 aa		12.74	□□□□□ -0.37
DDR1-223	ENST00000324771	POC1B-GALNT4	F8VUJ3	575 aa		12.74	□□□□□ -0.37
DDR1-223	ENST00000324771	RNF225	M0QZC1	329 aa	Predicted RBP	12.74	□□□□□ -0.37
DDR1-223	ENST00000324771	CCT5	P48643	541 aa		12.74	□□□□□ -0.37
DDR1-223	ENST00000324771	STAT5B	P51692	787 aa		12.74	□□□□□ -0.37
DDR1-223	ENST00000324771	CASP5	P51878	434 aa		12.74	□□□□□ -0.37
DDR1-223	ENST00000324771	APOBEC3F	Q8IUX4	373 aa	Known RBP	12.74	□□□□□ -0.37
DDR1-223	ENST00000324771	GADD45GIP1	Q8TAE8	222 aa	Predicted RBP	12.74	□□□□□ -0.37
DDR1-223	ENST00000324771	LPAR1	Q92633	364 aa		12.74	□□□□□ -0.37
DDR1-223	ENST00000324771	FAM84A	Q96KN4	292 aa		12.74	□□□□□ -0.37
DDR1-223	ENST00000324771	TARS2	Q9BW92	718 aa	Known RBP	12.74	□□□□□ -0.37
DDR1-223	ENST00000324771	ADAM33	Q9BZ11	813 aa		12.74	□□□□□ -0.37
DDR1-223	ENST00000324771	TUFT1	Q9NNX1	390 aa		12.74	□□□□□ -0.37
DDR1-223	ENST00000324771	KLHL11	Q9NVR0	708 aa		12.74	□□□□□ -0.37
DDR1-223	ENST00000324771	NKIRAS1	Q9NYS0	192 aa		12.74	□□□□□ -0.37
DDR1-223	ENST00000324771	PEX10	O60683	326 aa		12.74	□□□□□ -0.37
DDR1-223	ENST00000324771	STAM2	O75886	525 aa		12.74	□□□□□ -0.37
DDR1-223	ENST00000324771	SREBF1	P36956	1147 aa		12.74	□□□□□ -0.37
DDR1-223	ENST00000324771	SLC8A3	P57103	927 aa		12.74	□□□□□ -0.37
DDR1-223	ENST00000324771	BFSP1	Q12934	665 aa		12.74	□□□□□ -0.37
DDR1-223	ENST00000324771	ZNF568	Q3ZCX4	644 aa		12.74	□□□□□ -0.37
DDR1-223	ENST00000324771	CCDC91	Q7Z6B0	441 aa		12.74	□□□□□ -0.37
DDR1-223	ENST00000324771	KCNG1	Q9UIX4	513 aa		12.74	□□□□□ -0.37
DDR1-223	ENST00000324771	TXN	P10599	105 aa	Known RBP	12.73	□□□□□ -0.37
DDR1-223	ENST00000324771	FRMD5	Q7Z6J6	570 aa		12.73	□□□□□ -0.37
DDR1-223	ENST00000324771	DDX42	Q86XP3	938 aa	Known RBP eCLIP	12.73	□□□□□ -0.37
DDR1-223	ENST00000324771	CBWD2	Q8IUF1	395 aa		12.73	□□□□□ -0.37
DDR1-223	ENST00000324771	AGBL3	Q8NEM8	1001 aa		12.73	□□□□□ -0.37
DDR1-223	ENST00000324771	ANKS1A	Q92625	1134 aa		12.73	□□□□□ -0.37
DDR1-223	ENST00000324771	ZWILCH	Q9H900	591 aa		12.73	□□□□□ -0.37
DDR1-223	ENST00000324771	AGO2	Q9UKV8	859 aa	Known RBP	12.73	□□□□□ -0.37
DDR1-223	ENST00000324771	PLSCR1	O15162	318 aa		12.73	□□□□□ -0.37
DDR1-223	ENST00000324771	PPP1R11	O60927	126 aa	Predicted RBP	12.73	□□□□□ -0.37
DDR1-223	ENST00000324771	RNF8	O76064	485 aa		12.73	□□□□□ -0.37
DDR1-223	ENST00000324771	PRKCE	Q02156	737 aa		12.73	□□□□□ -0.37
DDR1-223	ENST00000324771	SLC18A3	Q16572	532 aa		12.73	□□□□□ -0.37
DDR1-223	ENST00000324771	TKFC	Q3LXA3	575 aa		12.73	□□□□□ -0.37
DDR1-223	ENST00000324771	KRT39	Q6A163	491 aa		12.73	□□□□□ -0.37
DDR1-223	ENST00000324771	PSPC1	Q8WXF1	523 aa	Known RBP	12.73	□□□□□ -0.37
DDR1-223	ENST00000324771	RSAD2	Q8WXG1	361 aa		12.73	□□□□□ -0.37
DDR1-223	ENST00000324771	CABS1	Q96KC9	395 aa		12.73	□□□□□ -0.37
DDR1-223	ENST00000324771	RBAK	Q9NYW8	714 aa	Predicted RBP	12.73	□□□□□ -0.37
DDR1-223	ENST00000324771	ARHGAP20	Q9P2F6	1191 aa		12.73	□□□□□ -0.37
DDR1-223	ENST00000324771	HESX1	Q9UBX0	185 aa		12.73	□□□□□ -0.37
DDR1-223	ENST00000324771	PCSK1N	Q9UHG2	260 aa		12.73	□□□□□ -0.37
DDR1-223	ENST00000324771	ADAM21	Q9UKJ8	722 aa		12.73	□□□□□ -0.37
DDR1-223	ENST00000324771	TTC7A	Q9ULT0	858 aa	Predicted RBP	12.73	□□□□□ -0.37
DDR1-223	ENST00000324771	TBX3	O15119	743 aa		12.73	□□□□□ -0.37
DDR1-223	ENST00000324771	ACSL3	O95573	720 aa		12.73	□□□□□ -0.37
DDR1-223	ENST00000324771	SMAD1	Q15797	465 aa	Known RBP	12.73	□□□□□ -0.37
DDR1-223	ENST00000324771	DNAJC24	Q6P3W2	148 aa		12.73	□□□□□ -0.37
DDR1-223	ENST00000324771	SH3RF1	Q7Z6J0	888 aa		12.73	□□□□□ -0.37
DDR1-223	ENST00000324771	PPP1R13L	Q8WUF5	828 aa		12.73	□□□□□ -0.37
DDR1-223	ENST00000324771	HEXIM2	Q96MH2	286 aa	Known RBP	12.73	□□□□□ -0.37
DDR1-223	ENST00000324771	FERMT1	Q9BQL6	677 aa		12.73	□□□□□ -0.37
DDR1-223	ENST00000324771	MED10	Q9BTT4	135 aa		12.73	□□□□□ -0.37
DDR1-223	ENST00000324771	SOX5	P35711	763 aa		12.73	□□□□□ -0.37
DDR1-223	ENST00000324771	EPHB4	P54760	987 aa		12.73	□□□□□ -0.37
DDR1-223	ENST00000324771	SNRNP35	Q16560	246 aa	Known RBP	12.73	□□□□□ -0.37
DDR1-223	ENST00000324771	CPA5	Q8WXQ8	436 aa		12.73	□□□□□ -0.37
DDR1-223	ENST00000324771	ANKRD36BP1	Q96IX9	119 aa		12.73	□□□□□ -0.37

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