RNA–Protein interactions for RNA: ENST00000324685.10

RNF40-201, Transcript of ring finger protein 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF40, Length 5,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-201ENST00000324685 NAALADL2Q58DX5 795 aa22.41■■□□□ 1.18
RNF40-201ENST00000324685 THNSL1Q8IYQ7 743 aa22.41■■□□□ 1.18
RNF40-201ENST00000324685 OSBPL5Q9H0X9 879 aaPredicted RBP22.41■■□□□ 1.18
RNF40-201ENST00000324685 PTCH1Q13635 1447 aa22.4■■□□□ 1.18
RNF40-201ENST00000324685 ARFIP2P53365 341 aa22.4■■□□□ 1.18
RNF40-201ENST00000324685 TOB2Q14106 344 aaPredicted RBP22.4■■□□□ 1.18
RNF40-201ENST00000324685 EFTUD2Q15029 972 aaKnown RBP eCLIP22.4■■□□□ 1.185e-7■■■■□ 19.7
RNF40-201ENST00000324685 IMPG1Q17R60 797 aa22.4■■□□□ 1.18
RNF40-201ENST00000324685 PIGOQ8TEQ8 1089 aa22.4■■□□□ 1.18
RNF40-201ENST00000324685 FAM20AQ96MK3 541 aa22.4■■□□□ 1.18
RNF40-201ENST00000324685 WNT8AQ9H1J5 351 aa22.4■■□□□ 1.18
RNF40-201ENST00000324685 TRIM45Q9H8W5 580 aaPredicted RBP22.4■■□□□ 1.18
RNF40-201ENST00000324685 H0Y3Z8 333 aa22.4■■□□□ 1.18
RNF40-201ENST00000324685 ESRRBO95718 433 aa22.4■■□□□ 1.18
RNF40-201ENST00000324685 KCNH2Q12809 1159 aa22.4■■□□□ 1.18
RNF40-201ENST00000324685 E2F4Q16254 413 aa22.4■■□□□ 1.18
RNF40-201ENST00000324685 FAM196AQ6ZSG2 479 aa22.4■■□□□ 1.18
RNF40-201ENST00000324685 RASSF3Q86WH2 238 aa22.4■■□□□ 1.18
RNF40-201ENST00000324685 SNF8Q96H20 258 aa22.4■■□□□ 1.18
RNF40-201ENST00000324685 CREB3O43889 395 aa22.4■■□□□ 1.18
RNF40-201ENST00000324685 PHKA2P46019 1235 aa22.4■■□□□ 1.18
RNF40-201ENST00000324685 PADI6Q6TGC4 694 aa22.4■■□□□ 1.18
RNF40-201ENST00000324685 RUBCNQ92622 972 aa22.4■■□□□ 1.18
RNF40-201ENST00000324685 DYDC2Q96IM9 177 aa22.4■■□□□ 1.18
RNF40-201ENST00000324685 ERVK-7P63135 1459 aa22.4■■□□□ 1.18
RNF40-201ENST00000324685 DYNC1I2Q13409 638 aaKnown RBP22.4■■□□□ 1.18
RNF40-201ENST00000324685 LRRC31Q6UY01 552 aa22.4■■□□□ 1.18
RNF40-201ENST00000324685 TGS1Q96RS0 853 aaKnown RBP22.4■■□□□ 1.18
RNF40-201ENST00000324685 PRAMEF22A3QJZ6 481 aa22.39■■□□□ 1.18
RNF40-201ENST00000324685 NLRP14Q86W24 1093 aa22.39■■□□□ 1.18
RNF40-201ENST00000324685 CFAP73A6NFT4 308 aa22.39■■□□□ 1.18
RNF40-201ENST00000324685 KRT7P08729 469 aa22.39■■□□□ 1.18
RNF40-201ENST00000324685 MAPK6Q16659 721 aa22.39■■□□□ 1.18
RNF40-201ENST00000324685 CDKL3Q8IVW4 592 aaPredicted RBP22.39■■□□□ 1.18
RNF40-201ENST00000324685 MMTAG2Q9BU76 263 aaKnown RBP22.39■■□□□ 1.18
RNF40-201ENST00000324685 INTS2Q9H0H0 1204 aaKnown RBP22.39■■□□□ 1.18
RNF40-201ENST00000324685 SLITRK6Q9H5Y7 841 aa22.39■■□□□ 1.18
RNF40-201ENST00000324685 PRCPP42785 496 aa22.39■■□□□ 1.17
RNF40-201ENST00000324685 MRPS25P82663 173 aaKnown RBP22.39■■□□□ 1.17
RNF40-201ENST00000324685 ARID5BQ14865 1188 aa22.39■■□□□ 1.17
RNF40-201ENST00000324685 SLC27A3Q5K4L6 730 aa22.39■■□□□ 1.17
RNF40-201ENST00000324685 PDXDC1Q6P996 788 aa22.39■■□□□ 1.17
RNF40-201ENST00000324685 TMEM270Q6UE05 265 aa22.39■■□□□ 1.17
RNF40-201ENST00000324685 ANO5Q75V66 913 aa22.39■■□□□ 1.17
RNF40-201ENST00000324685 TAF1DQ9H5J8 278 aaPredicted RBP22.39■■□□□ 1.17
RNF40-201ENST00000324685 TTC37Q6PGP7 1564 aa22.39■■□□□ 1.17
RNF40-201ENST00000324685 GCLMP48507 274 aa22.39■■□□□ 1.17
RNF40-201ENST00000324685 KNOP1Q1ED39 458 aaKnown RBP22.39■■□□□ 1.17
RNF40-201ENST00000324685 TTC39CQ8N584 583 aa22.39■■□□□ 1.17
RNF40-201ENST00000324685 FEM1BQ9UK73 627 aa22.39■■□□□ 1.17
RNF40-201ENST00000324685 PNMA3Q9UL41 463 aa22.39■■□□□ 1.17
RNF40-201ENST00000324685 RFX7Q2KHR2 1363 aa22.39■■□□□ 1.17
RNF40-201ENST00000324685 KITP10721 976 aa22.39■■□□□ 1.17
RNF40-201ENST00000324685 AARSP49588 968 aaKnown RBP eCLIP22.39■■□□□ 1.17
RNF40-201ENST00000324685 GYS2P54840 703 aa22.39■■□□□ 1.17
RNF40-201ENST00000324685 FLOT2Q14254 428 aa22.39■■□□□ 1.17
RNF40-201ENST00000324685 GRAMD1AQ96CP6 724 aa22.39■■□□□ 1.17
RNF40-201ENST00000324685 HPCAL4Q9UM19 191 aa22.39■■□□□ 1.17
RNF40-201ENST00000324685 CFAP74Q9C0B2 1584 aa22.38■■□□□ 1.17
RNF40-201ENST00000324685 MAN1A2O60476 641 aa22.38■■□□□ 1.17
RNF40-201ENST00000324685 SNAP25P60880 206 aa22.38■■□□□ 1.17
RNF40-201ENST00000324685 ITPRIPL1Q6GPH6 555 aa22.38■■□□□ 1.17
RNF40-201ENST00000324685 MTA3Q9BTC8 594 aa22.38■■□□□ 1.17
RNF40-201ENST00000324685 ZNF341Q9BYN7 854 aa22.38■■□□□ 1.17
RNF40-201ENST00000324685 ECT2Q9H8V3 914 aa22.38■■□□□ 1.17
RNF40-201ENST00000324685 HADHAP40939 763 aa22.38■■□□□ 1.17
RNF40-201ENST00000324685 KRT76Q01546 638 aa22.38■■□□□ 1.17
RNF40-201ENST00000324685 MKRN3Q13064 507 aaKnown RBP22.38■■□□□ 1.17
RNF40-201ENST00000324685 HEY1Q9Y5J3 304 aa22.38■■□□□ 1.17
RNF40-201ENST00000324685 SDC4P31431 198 aa22.38■■□□□ 1.17
RNF40-201ENST00000324685 STXBP2Q15833 593 aa22.38■■□□□ 1.17
RNF40-201ENST00000324685 BEST2Q8NFU1 509 aa22.38■■□□□ 1.17
RNF40-201ENST00000324685 ATP6V1G3Q96LB4 118 aa22.38■■□□□ 1.17
RNF40-201ENST00000324685 OLFM3Q96PB7 478 aa22.38■■□□□ 1.17
RNF40-201ENST00000324685 EIF2AK3Q9NZJ5 1116 aaKnown RBP22.38■■□□□ 1.17
RNF40-201ENST00000324685 SEL1LQ9UBV2 794 aa22.38■■□□□ 1.17
RNF40-201ENST00000324685 PRKAG2Q9UGJ0 569 aa22.38■■□□□ 1.17
RNF40-201ENST00000324685 NEDD4P46934 1319 aa22.38■■□□□ 1.17
RNF40-201ENST00000324685 ANKARQ7Z5J8 1434 aa22.38■■□□□ 1.17
RNF40-201ENST00000324685 POTEMA6NI47 508 aa22.38■■□□□ 1.17
RNF40-201ENST00000324685 HUS1O60921 280 aa22.38■■□□□ 1.17
RNF40-201ENST00000324685 GNAT1P11488 350 aa22.38■■□□□ 1.17
RNF40-201ENST00000324685 MCAMP43121 646 aa22.38■■□□□ 1.17
RNF40-201ENST00000324685 HDAC4P56524 1084 aa22.38■■□□□ 1.17
RNF40-201ENST00000324685 RNF219Q5W0B1 726 aaPredicted RBP22.38■■□□□ 1.17
RNF40-201ENST00000324685 PASD1Q8IV76 773 aa22.38■■□□□ 1.17
RNF40-201ENST00000324685 SAAL1Q96ER3 474 aa22.38■■□□□ 1.17
RNF40-201ENST00000324685 GOLPH3LQ9H4A5 285 aa22.38■■□□□ 1.17
RNF40-201ENST00000324685 CPSF1Q10570 1443 aaKnown RBP22.38■■□□□ 1.17
RNF40-201ENST00000324685 PPP1R12AO14974 1030 aaPredicted RBP22.37■■□□□ 1.17
RNF40-201ENST00000324685 VAMP7P51809 220 aa22.37■■□□□ 1.17
RNF40-201ENST00000324685 ROR1Q01973 937 aa22.37■■□□□ 1.17
RNF40-201ENST00000324685 MIGA2Q7L4E1 593 aa22.37■■□□□ 1.17
RNF40-201ENST00000324685 ARHGAP18Q8N392 663 aa22.37■■□□□ 1.17
RNF40-201ENST00000324685 OR9Q1Q8NGQ5 310 aa22.37■■□□□ 1.17
RNF40-201ENST00000324685 C11orf70Q9BRQ4 267 aa22.37■■□□□ 1.17
RNF40-201ENST00000324685 CHCHD3Q9NX63 227 aaKnown RBP22.37■■□□□ 1.17
RNF40-201ENST00000324685 KIF17Q9P2E2 1029 aa22.37■■□□□ 1.17
RNF40-201ENST00000324685 FBXO40Q9UH90 709 aa22.37■■□□□ 1.17
RNF40-201ENST00000324685 STAP1Q9ULZ2 295 aa22.37■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms