RNA–Protein interactions for RNA: ENST00000323853.9

SNRNP200-201, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP200, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-201ENST00000323853 KRT76Q01546 638 aa11.67□□□□□ -0.54
SNRNP200-201ENST00000323853 Q3C1V9 767 aa11.67□□□□□ -0.54
SNRNP200-201ENST00000323853 TTC13Q8NBP0 860 aa11.67□□□□□ -0.54
SNRNP200-201ENST00000323853 FAM84BQ96KN1 310 aaPredicted RBP11.67□□□□□ -0.54
SNRNP200-201ENST00000323853 IP6K2Q9UHH9 426 aa11.67□□□□□ -0.54
SNRNP200-201ENST00000323853 GGPS1O95749 300 aa11.67□□□□□ -0.54
SNRNP200-201ENST00000323853 SOX5P35711 763 aa11.67□□□□□ -0.54
SNRNP200-201ENST00000323853 USP11P51784 963 aa11.67□□□□□ -0.54
SNRNP200-201ENST00000323853 MAGOHP61326 146 aaKnown RBP11.67□□□□□ -0.54
SNRNP200-201ENST00000323853 KLHL38Q2WGJ6 581 aa11.67□□□□□ -0.54
SNRNP200-201ENST00000323853 ZNF699Q32M78 642 aa11.67□□□□□ -0.54
SNRNP200-201ENST00000323853 IQGAP1P46940 1657 aa11.67□□□□□ -0.54
SNRNP200-201ENST00000323853 NPHP3-ACAD11A0A0J9YXS1 232 aa11.67□□□□□ -0.54
SNRNP200-201ENST00000323853 A0A1B0GTH6 734 aa11.67□□□□□ -0.54
SNRNP200-201ENST00000323853 NBPF26B4DH59 902 aa11.67□□□□□ -0.54
SNRNP200-201ENST00000323853 SLC16A3O15427 465 aaKnown RBP11.67□□□□□ -0.54
SNRNP200-201ENST00000323853 ART3Q13508 389 aa11.67□□□□□ -0.54
SNRNP200-201ENST00000323853 NBPF10Q6P3W6 841 aaKnown RBP11.67□□□□□ -0.54
SNRNP200-201ENST00000323853 CRLF3Q8IUI8 442 aa11.67□□□□□ -0.54
SNRNP200-201ENST00000323853 NBPF15Q8N660 670 aa11.67□□□□□ -0.54
SNRNP200-201ENST00000323853 RMDN3Q96TC7 470 aa11.67□□□□□ -0.54
SNRNP200-201ENST00000323853 STRIP2Q9ULQ0 834 aa11.67□□□□□ -0.54
SNRNP200-201ENST00000323853 FRMPD1Q5SYB0 1578 aa11.67□□□□□ -0.54
SNRNP200-201ENST00000323853 FAM187AA6NFU0 413 aa11.67□□□□□ -0.54
SNRNP200-201ENST00000323853 ZNF211Q13398 564 aaPredicted RBP11.67□□□□□ -0.54
SNRNP200-201ENST00000323853 QRICH1Q2TAL8 776 aa11.67□□□□□ -0.54
SNRNP200-201ENST00000323853 SEPT12Q8IYM1 358 aa11.67□□□□□ -0.54
SNRNP200-201ENST00000323853 SNF8Q96H20 258 aa11.67□□□□□ -0.54
SNRNP200-201ENST00000323853 SERPINI1Q99574 410 aa11.67□□□□□ -0.54
SNRNP200-201ENST00000323853 EPC1Q9H2F5 836 aa11.67□□□□□ -0.54
SNRNP200-201ENST00000323853 INO80Q9ULG1 1556 aaPredicted RBP11.67□□□□□ -0.54
SNRNP200-201ENST00000323853 COPEO14579 308 aa11.67□□□□□ -0.54
SNRNP200-201ENST00000323853 TBXAS1P24557 533 aaPredicted RBP11.67□□□□□ -0.54
SNRNP200-201ENST00000323853 HIBCHQ6NVY1 386 aaPredicted RBP11.67□□□□□ -0.54
SNRNP200-201ENST00000323853 TMEM270Q6UE05 265 aa11.67□□□□□ -0.54
SNRNP200-201ENST00000323853 TBC1D1Q86TI0 1168 aaPredicted RBP11.67□□□□□ -0.54
SNRNP200-201ENST00000323853 ABI1Q8IZP0 508 aa11.67□□□□□ -0.54
SNRNP200-201ENST00000323853 OR6B3Q8NGW1 331 aa11.67□□□□□ -0.54
SNRNP200-201ENST00000323853 NUDCD1Q96RS6 583 aa11.67□□□□□ -0.54
SNRNP200-201ENST00000323853 FGFR1OP2Q9NVK5 253 aa11.67□□□□□ -0.54
SNRNP200-201ENST00000323853 LRFN2Q9ULH4 789 aa11.67□□□□□ -0.54
SNRNP200-201ENST00000323853 PACSIN2Q9UNF0 486 aaPredicted RBP11.67□□□□□ -0.54
SNRNP200-201ENST00000323853 ITSN1Q15811 1721 aa11.67□□□□□ -0.54
SNRNP200-201ENST00000323853 UBE4BO95155 1302 aa11.67□□□□□ -0.54
SNRNP200-201ENST00000323853 DENND3A2RUS2 1198 aa11.66□□□□□ -0.54
SNRNP200-201ENST00000323853 RASA4BC9J798 803 aa11.66□□□□□ -0.54
SNRNP200-201ENST00000323853 RASA4O43374 803 aa11.66□□□□□ -0.54
SNRNP200-201ENST00000323853 IQCB1Q15051 598 aa11.66□□□□□ -0.54
SNRNP200-201ENST00000323853 RC3H1Q5TC82 1133 aaKnown RBP11.66□□□□□ -0.54
SNRNP200-201ENST00000323853 ATP6V1E2Q96A05 226 aa11.66□□□□□ -0.54
SNRNP200-201ENST00000323853 SCOCQ9UIL1 159 aa11.66□□□□□ -0.54
SNRNP200-201ENST00000323853 ARHGEF37A1IGU5 675 aa11.66□□□□□ -0.54
SNRNP200-201ENST00000323853 IL1RL1Q01638 556 aa11.66□□□□□ -0.54
SNRNP200-201ENST00000323853 GPR162Q16538 588 aa11.66□□□□□ -0.54
SNRNP200-201ENST00000323853 RPAINQ86UA6 219 aa11.66□□□□□ -0.54
SNRNP200-201ENST00000323853 NLRP14Q86W24 1093 aa11.66□□□□□ -0.54
SNRNP200-201ENST00000323853 TRAIPQ9BWF2 469 aa11.66□□□□□ -0.54
SNRNP200-201ENST00000323853 POLR3FQ9H1D9 316 aaPredicted RBP11.66□□□□□ -0.54
SNRNP200-201ENST00000323853 TDRD3Q9H7E2 651 aaKnown RBP11.66□□□□□ -0.54
SNRNP200-201ENST00000323853 CLDN3O15551 220 aa11.66□□□□□ -0.54
SNRNP200-201ENST00000323853 TTLL6Q8N841 843 aa11.66□□□□□ -0.54
SNRNP200-201ENST00000323853 TMEM35BQ8NCS4 154 aa11.66□□□□□ -0.54
SNRNP200-201ENST00000323853 PTPRUQ92729 1446 aa11.66□□□□□ -0.54
SNRNP200-201ENST00000323853 LXNQ9BS40 222 aa11.66□□□□□ -0.54
SNRNP200-201ENST00000323853 KIF9Q9HAQ2 790 aa11.66□□□□□ -0.54
SNRNP200-201ENST00000323853 DDX56Q9NY93 547 aaKnown RBP11.66□□□□□ -0.54
SNRNP200-201ENST00000323853 FAF1Q9UNN5 650 aaPredicted RBP11.66□□□□□ -0.54
SNRNP200-201ENST00000323853 PEX19P40855 299 aa11.66□□□□□ -0.54
SNRNP200-201ENST00000323853 FMR1Q06787 632 aaKnown RBP eCLIP11.66□□□□□ -0.541e-7■■■■□ 21.9
SNRNP200-201ENST00000323853 IGDCC4Q8TDY8 1250 aa11.66□□□□□ -0.54
SNRNP200-201ENST00000323853 ZNF512BQ96KM6 892 aaPredicted RBP11.66□□□□□ -0.54
SNRNP200-201ENST00000323853 ATP6V1G3Q96LB4 118 aa11.66□□□□□ -0.54
SNRNP200-201ENST00000323853 NBPF3Q9H094 633 aa11.66□□□□□ -0.54
SNRNP200-201ENST00000323853 SLITRK6Q9H5Y7 841 aa11.66□□□□□ -0.54
SNRNP200-201ENST00000323853 INTUQ9ULD6 942 aa11.66□□□□□ -0.54
SNRNP200-201ENST00000323853 FAM196BA6NMK8 535 aa11.66□□□□□ -0.54
SNRNP200-201ENST00000323853 SPECC1L-ADORA2AF8WAN1 911 aa11.66□□□□□ -0.54
SNRNP200-201ENST00000323853 FTLP02792 175 aaPredicted RBP11.66□□□□□ -0.54
SNRNP200-201ENST00000323853 RXRBP28702 533 aa11.66□□□□□ -0.54
SNRNP200-201ENST00000323853 MTF1Q14872 753 aa11.66□□□□□ -0.54
SNRNP200-201ENST00000323853 THNSL1Q8IYQ7 743 aa11.66□□□□□ -0.54
SNRNP200-201ENST00000323853 SYT2Q8N9I0 419 aaPredicted RBP11.66□□□□□ -0.54
SNRNP200-201ENST00000323853 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.66□□□□□ -0.54
SNRNP200-201ENST00000323853 CPSF3Q9UKF6 684 aaKnown RBP11.66□□□□□ -0.54
SNRNP200-201ENST00000323853 ESYT2A0FGR8 921 aa11.66□□□□□ -0.54
SNRNP200-201ENST00000323853 KRT37O76014 449 aa11.66□□□□□ -0.54
SNRNP200-201ENST00000323853 SLC4A1P02730 911 aa11.66□□□□□ -0.54
SNRNP200-201ENST00000323853 GNA15P30679 374 aa11.66□□□□□ -0.54
SNRNP200-201ENST00000323853 KLC3Q6P597 504 aa11.66□□□□□ -0.54
SNRNP200-201ENST00000323853 TTC17Q96AE7 1141 aa11.66□□□□□ -0.54
SNRNP200-201ENST00000323853 GMNCA6NCL1 334 aa11.65□□□□□ -0.54
SNRNP200-201ENST00000323853 GNGT2O14610 69 aa11.65□□□□□ -0.54
SNRNP200-201ENST00000323853 C21orf2O43822 256 aa11.65□□□□□ -0.54
SNRNP200-201ENST00000323853 HSPA4LO95757 839 aa11.65□□□□□ -0.54
SNRNP200-201ENST00000323853 MMP10P09238 476 aa11.65□□□□□ -0.54
SNRNP200-201ENST00000323853 TADA2BQ86TJ2 420 aa11.65□□□□□ -0.54
SNRNP200-201ENST00000323853 GPD1LQ8N335 351 aa11.65□□□□□ -0.54
SNRNP200-201ENST00000323853 PPWD1Q96BP3 646 aaKnown RBP11.65□□□□□ -0.54
SNRNP200-201ENST00000323853 WDR24Q96S15 920 aa11.65□□□□□ -0.54
SNRNP200-201ENST00000323853 NCAPGQ9BPX3 1015 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 117.1 ms