RNA–Protein interactions for RNA: ENST00000322887.8

SEC24A-201, Transcript of SEC24 homolog A, COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC24A, Length 2,700 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24A-201ENST00000322887 USP17L15C9J2P7 530 aa13.21□□□□□ -0.29
SEC24A-201ENST00000322887 USP17L13C9JLJ4 530 aa13.21□□□□□ -0.29
SEC24A-201ENST00000322887 USP17L11C9JVI0 530 aa13.21□□□□□ -0.29
SEC24A-201ENST00000322887 USP17L18D6R9N7 530 aa13.21□□□□□ -0.29
SEC24A-201ENST00000322887 USP17L22D6RA61 530 aa13.21□□□□□ -0.29
SEC24A-201ENST00000322887 USP17L17D6RBQ6 530 aa13.21□□□□□ -0.29
SEC24A-201ENST00000322887 USP17L19D6RCP7 530 aa13.21□□□□□ -0.29
SEC24A-201ENST00000322887 USP17L20D6RJB6 530 aa13.21□□□□□ -0.29
SEC24A-201ENST00000322887 PGRMC1O00264 195 aaKnown RBP13.21□□□□□ -0.29
SEC24A-201ENST00000322887 LAD1O00515 517 aa13.21□□□□□ -0.29
SEC24A-201ENST00000322887 NEBLO76041 1014 aa13.21□□□□□ -0.29
SEC24A-201ENST00000322887 UCHL3P15374 230 aa13.21□□□□□ -0.29
SEC24A-201ENST00000322887 FGFR4P22455 802 aa13.21□□□□□ -0.29
SEC24A-201ENST00000322887 MARCKSL1P49006 195 aa13.21□□□□□ -0.29
SEC24A-201ENST00000322887 CDK8P49336 464 aa13.21□□□□□ -0.29
SEC24A-201ENST00000322887 KCNJ2P63252 427 aa13.21□□□□□ -0.29
SEC24A-201ENST00000322887 ELF3P78545 371 aaPredicted RBP13.21□□□□□ -0.29
SEC24A-201ENST00000322887 USP17L24Q0WX57 530 aa13.21□□□□□ -0.29
SEC24A-201ENST00000322887 NFIAQ12857 509 aa13.21□□□□□ -0.29
SEC24A-201ENST00000322887 MYO1EQ12965 1108 aa13.21□□□□□ -0.29
SEC24A-201ENST00000322887 NAA25Q14CX7 972 aa13.21□□□□□ -0.29
SEC24A-201ENST00000322887 PPP2R5AQ15172 486 aa13.21□□□□□ -0.29
SEC24A-201ENST00000322887 USP17L6PQ6QN14 398 aa13.21□□□□□ -0.29
SEC24A-201ENST00000322887 ELMO3Q96BJ8 720 aa13.21□□□□□ -0.29
SEC24A-201ENST00000322887 MIEF2Q96C03 454 aa13.21□□□□□ -0.29
SEC24A-201ENST00000322887 PAGR1Q9BTK6 254 aa13.21□□□□□ -0.29
SEC24A-201ENST00000322887 DDX4Q9NQI0 724 aaKnown RBP13.21□□□□□ -0.29
SEC24A-201ENST00000322887 DBR1Q9UK59 544 aaKnown RBP13.21□□□□□ -0.29
SEC24A-201ENST00000322887 CNTNAP1P78357 1384 aa13.21□□□□□ -0.3
SEC24A-201ENST00000322887 TMEM110-MUSTN1A8MSY1 372 aa13.2□□□□□ -0.3
SEC24A-201ENST00000322887 DPY19L2P1Q6NXN4 242 aa13.2□□□□□ -0.3
SEC24A-201ENST00000322887 GLYCTKQ8IVS8 523 aa13.2□□□□□ -0.3
SEC24A-201ENST00000322887 RNF25Q96BH1 459 aaPredicted RBP13.2□□□□□ -0.3
SEC24A-201ENST00000322887 TACO1Q9BSH4 297 aaKnown RBP13.2□□□□□ -0.3
SEC24A-201ENST00000322887 SEPT11Q9NVA2 429 aaKnown RBP13.2□□□□□ -0.3
SEC24A-201ENST00000322887 ATXN2Q99700 1313 aaKnown RBP13.2□□□□□ -0.3
SEC24A-201ENST00000322887 DDX3XO00571 662 aaKnown RBP eCLIP13.2□□□□□ -0.35e-9■■■■□ 19.9
SEC24A-201ENST00000322887 KRT18P05783 430 aaKnown RBP13.2□□□□□ -0.3
SEC24A-201ENST00000322887 MMEP08473 750 aa13.2□□□□□ -0.3
SEC24A-201ENST00000322887 HOXD13P35453 343 aa13.2□□□□□ -0.3
SEC24A-201ENST00000322887 PICALMQ13492 652 aa13.2□□□□□ -0.3
SEC24A-201ENST00000322887 ARSHQ5FYA8 562 aa13.2□□□□□ -0.3
SEC24A-201ENST00000322887 RBM26Q5T8P6 1007 aaKnown RBP13.2□□□□□ -0.3
SEC24A-201ENST00000322887 SPICE1Q8N0Z3 855 aa13.2□□□□□ -0.3
SEC24A-201ENST00000322887 RUBCNQ92622 972 aa13.2□□□□□ -0.3
SEC24A-201ENST00000322887 ARHGEF26Q96DR7 871 aa13.2□□□□□ -0.3
SEC24A-201ENST00000322887 POP1Q99575 1024 aaKnown RBP13.2□□□□□ -0.3
SEC24A-201ENST00000322887 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.2□□□□□ -0.39e-7■□□□□ 10.5
SEC24A-201ENST00000322887 ADAM7Q9H2U9 754 aa13.2□□□□□ -0.3
SEC24A-201ENST00000322887 KCTD10Q9H3F6 313 aa13.2□□□□□ -0.3
SEC24A-201ENST00000322887 VEZTQ9HBM0 779 aa13.2□□□□□ -0.3
SEC24A-201ENST00000322887 NOD2Q9HC29 1040 aa13.2□□□□□ -0.3
SEC24A-201ENST00000322887 EMILIN3Q9NT22 766 aa13.2□□□□□ -0.3
SEC24A-201ENST00000322887 TSKSQ9UJT2 592 aa13.2□□□□□ -0.3
SEC24A-201ENST00000322887 PVALEFA0A1B0GWK0 134 aa13.19□□□□□ -0.3
SEC24A-201ENST00000322887 PON1P27169 355 aa13.19□□□□□ -0.3
SEC24A-201ENST00000322887 PABPC4Q13310 644 aaKnown RBP eCLIP13.19□□□□□ -0.3
SEC24A-201ENST00000322887 EMC10Q5UCC4 262 aa13.19□□□□□ -0.3
SEC24A-201ENST00000322887 GKAP1Q5VSY0 366 aaPredicted RBP13.19□□□□□ -0.3
SEC24A-201ENST00000322887 SEPT14Q6ZU15 432 aa13.19□□□□□ -0.3
SEC24A-201ENST00000322887 FBXO25Q8TCJ0 367 aa13.19□□□□□ -0.3
SEC24A-201ENST00000322887 C18orf8Q96DM3 657 aa13.19□□□□□ -0.3
SEC24A-201ENST00000322887 XPO6Q96QU8 1125 aaKnown RBP13.19□□□□□ -0.3
SEC24A-201ENST00000322887 DDX25Q9UHL0 483 aaKnown RBP13.19□□□□□ -0.3
SEC24A-201ENST00000322887 PCDHB13Q9Y5F0 798 aa13.19□□□□□ -0.3
SEC24A-201ENST00000322887 PCDHA2Q9Y5H9 948 aa13.19□□□□□ -0.3
SEC24A-201ENST00000322887 NAV1Q8NEY1 1877 aa13.19□□□□□ -0.3
SEC24A-201ENST00000322887 CLRN2A0PK11 232 aa13.19□□□□□ -0.3
SEC24A-201ENST00000322887 ANKRD63C9JTQ0 380 aa13.19□□□□□ -0.3
SEC24A-201ENST00000322887 MED24O75448 989 aa13.19□□□□□ -0.3
SEC24A-201ENST00000322887 AKAP3O75969 853 aa13.19□□□□□ -0.3
SEC24A-201ENST00000322887 ATP6V1G2O95670 118 aa13.19□□□□□ -0.3
SEC24A-201ENST00000322887 GNA11P29992 359 aa13.19□□□□□ -0.3
SEC24A-201ENST00000322887 CYP4A11Q02928 519 aa13.19□□□□□ -0.3
SEC24A-201ENST00000322887 WLSQ5T9L3 541 aa13.19□□□□□ -0.3
SEC24A-201ENST00000322887 KCTD1Q719H9 257 aa13.19□□□□□ -0.3
SEC24A-201ENST00000322887 LNX1Q8TBB1 728 aaPredicted RBP13.19□□□□□ -0.3
SEC24A-201ENST00000322887 SEMA4AQ9H3S1 761 aa13.19□□□□□ -0.3
SEC24A-201ENST00000322887 MAGEF1Q9HAY2 307 aa13.19□□□□□ -0.3
SEC24A-201ENST00000322887 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.19□□□□□ -0.3
SEC24A-201ENST00000322887 TCRBV7S2A1N4TA0A589 114 aa13.19□□□□□ -0.3
SEC24A-201ENST00000322887 VIMP08670 466 aaKnown RBP13.19□□□□□ -0.3
SEC24A-201ENST00000322887 PLA2G4BP0C869 781 aa13.19□□□□□ -0.3
SEC24A-201ENST00000322887 CHRM1P11229 460 aaPredicted RBP13.19□□□□□ -0.3
SEC24A-201ENST00000322887 GALCP54803 685 aa13.19□□□□□ -0.3
SEC24A-201ENST00000322887 MAP3K10Q02779 954 aa13.19□□□□□ -0.3
SEC24A-201ENST00000322887 SLC29A2Q14542 456 aa13.19□□□□□ -0.3
SEC24A-201ENST00000322887 TMEM266Q2M3C6 531 aa13.19□□□□□ -0.3
SEC24A-201ENST00000322887 TMEM119Q4V9L6 283 aa13.19□□□□□ -0.3
SEC24A-201ENST00000322887 ANGEL2Q5VTE6 544 aaKnown RBP13.19□□□□□ -0.3
SEC24A-201ENST00000322887 NT5DC3Q86UY8 548 aa13.19□□□□□ -0.3
SEC24A-201ENST00000322887 HOOK2Q96ED9 719 aa13.19□□□□□ -0.3
SEC24A-201ENST00000322887 AIPL1Q9NZN9 384 aa13.19□□□□□ -0.3
SEC24A-201ENST00000322887 PI4KBQ9UBF8 816 aa13.19□□□□□ -0.3
SEC24A-201ENST00000322887 PTPN22Q9Y2R2 807 aa13.19□□□□□ -0.3
SEC24A-201ENST00000322887 LAMB1P07942 1786 aa13.18□□□□□ -0.3
SEC24A-201ENST00000322887 TBC1D12O60347 775 aa13.18□□□□□ -0.3
SEC24A-201ENST00000322887 HLA-DOAP06340 250 aa13.18□□□□□ -0.3
SEC24A-201ENST00000322887 GNAQP50148 359 aa13.18□□□□□ -0.3
SEC24A-201ENST00000322887 COG2Q14746 738 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms