RNA–Protein interactions for RNA: ENST00000321356.8

CLK1-201, Transcript of CDC like kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK1, Length 1,888 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-201ENST00000321356 CTNNBL1Q8WYA6 563 aaPredicted RBP9.45□□□□□ -0.9
CLK1-201ENST00000321356 CYFIP2Q96F07 1278 aa9.45□□□□□ -0.9
CLK1-201ENST00000321356 STRA6Q9BX79 667 aa9.45□□□□□ -0.9
CLK1-201ENST00000321356 CELF4Q9BZC1 486 aaKnown RBP9.45□□□□□ -0.9
CLK1-201ENST00000321356 AGPAT3Q9NRZ7 376 aa9.45□□□□□ -0.9
CLK1-201ENST00000321356 ZDHHC18Q9NUE0 388 aa9.45□□□□□ -0.9
CLK1-201ENST00000321356 KCND2Q9NZV8 630 aa9.45□□□□□ -0.9
CLK1-201ENST00000321356 SYNPO2Q9UMS6 1093 aa9.45□□□□□ -0.9
CLK1-201ENST00000321356 UTP11Q9Y3A2 253 aaKnown RBP9.45□□□□□ -0.9
CLK1-201ENST00000321356 PCDHAC2Q9Y5I4 1007 aa9.45□□□□□ -0.9
CLK1-201ENST00000321356 COL2A1P02458 1487 aaPredicted RBP9.44□□□□□ -0.9
CLK1-201ENST00000321356 ANKRD62A6NC57 917 aa9.44□□□□□ -0.9
CLK1-201ENST00000321356 GMNCA6NCL1 334 aa9.44□□□□□ -0.9
CLK1-201ENST00000321356 C5orf60A6NFR6 353 aa9.44□□□□□ -0.9
CLK1-201ENST00000321356 ONECUT3O60422 494 aaPredicted RBP9.44□□□□□ -0.9
CLK1-201ENST00000321356 CCDC172P0C7W6 258 aa9.44□□□□□ -0.9
CLK1-201ENST00000321356 NPR1P16066 1061 aa9.44□□□□□ -0.9
CLK1-201ENST00000321356 GUCY2CP25092 1073 aa9.44□□□□□ -0.9
CLK1-201ENST00000321356 ZNF76P36508 570 aa9.44□□□□□ -0.9
CLK1-201ENST00000321356 EIF3BP55884 814 aaKnown RBP9.44□□□□□ -0.9
CLK1-201ENST00000321356 JAG1P78504 1218 aa9.44□□□□□ -0.9
CLK1-201ENST00000321356 DHX9Q08211 1270 aaKnown RBP9.44□□□□□ -0.9
CLK1-201ENST00000321356 MYBPC2Q14324 1141 aa9.44□□□□□ -0.9
CLK1-201ENST00000321356 COG2Q14746 738 aa9.44□□□□□ -0.9
CLK1-201ENST00000321356 PLCB4Q15147 1175 aa9.44□□□□□ -0.9
CLK1-201ENST00000321356 CLUL1Q15846 466 aa9.44□□□□□ -0.9
CLK1-201ENST00000321356 ABCB5Q2M3G0 1257 aa9.44□□□□□ -0.9
CLK1-201ENST00000321356 SLC27A3Q5K4L6 730 aa9.44□□□□□ -0.9
CLK1-201ENST00000321356 SWT1Q5T5J6 900 aaKnown RBP9.44□□□□□ -0.9
CLK1-201ENST00000321356 HS2ST1Q7LGA3 356 aa9.44□□□□□ -0.9
CLK1-201ENST00000321356 PODNQ7Z5L7 613 aa9.44□□□□□ -0.9
CLK1-201ENST00000321356 LMO3Q8TAP4 145 aa9.44□□□□□ -0.9
CLK1-201ENST00000321356 TLCD1Q96CP7 247 aa9.44□□□□□ -0.9
CLK1-201ENST00000321356 ARHGEF26Q96DR7 871 aa9.44□□□□□ -0.9
CLK1-201ENST00000321356 DYDC2Q96IM9 177 aa9.44□□□□□ -0.9
CLK1-201ENST00000321356 CEP89Q96ST8 783 aa9.44□□□□□ -0.9
CLK1-201ENST00000321356 NAP1L3Q99457 506 aaPredicted RBP9.44□□□□□ -0.9
CLK1-201ENST00000321356 TRIM51Q9BSJ1 452 aa9.44□□□□□ -0.9
CLK1-201ENST00000321356 RAB17Q9H0T7 212 aa9.44□□□□□ -0.9
CLK1-201ENST00000321356 EPB41L4BQ9H329 900 aa9.44□□□□□ -0.9
CLK1-201ENST00000321356 CNOT8Q9UFF9 292 aaKnown RBP9.44□□□□□ -0.9
CLK1-201ENST00000321356 ODF2LQ9ULJ1 636 aa9.44□□□□□ -0.9
CLK1-201ENST00000321356 PRR12Q9ULL5 1215 aa9.44□□□□□ -0.9
CLK1-201ENST00000321356 CAPN7Q9Y6W3 813 aa9.44□□□□□ -0.9
CLK1-201ENST00000321356 FAM187AA6NFU0 413 aa9.43□□□□□ -0.9
CLK1-201ENST00000321356 DCDC2CA8MYV0 355 aa9.43□□□□□ -0.9
CLK1-201ENST00000321356 UBAP1LF5GYI3 381 aa9.43□□□□□ -0.9
CLK1-201ENST00000321356 ZBTB39O15060 712 aa9.43□□□□□ -0.9
CLK1-201ENST00000321356 TOM1O60784 492 aa9.43□□□□□ -0.9
CLK1-201ENST00000321356 GDF11O95390 407 aa9.43□□□□□ -0.9
CLK1-201ENST00000321356 NUDT17P0C025 328 aa9.43□□□□□ -0.9
CLK1-201ENST00000321356 VCAM1P19320 739 aa9.43□□□□□ -0.9
CLK1-201ENST00000321356 PRELPP51888 382 aa9.43□□□□□ -0.9
CLK1-201ENST00000321356 DRG2P55039 364 aaKnown RBP9.43□□□□□ -0.9
CLK1-201ENST00000321356 MYL7Q01449 175 aa9.43□□□□□ -0.9
CLK1-201ENST00000321356 DHX34Q14147 1143 aaKnown RBP9.43□□□□□ -0.9
CLK1-201ENST00000321356 LRCH2Q5VUJ6 765 aa9.43□□□□□ -0.9
CLK1-201ENST00000321356 B3GNT9Q6UX72 402 aa9.43□□□□□ -0.9
CLK1-201ENST00000321356 STXBP4Q6ZWJ1 553 aa9.43□□□□□ -0.9
CLK1-201ENST00000321356 PALB2Q86YC2 1186 aa9.43□□□□□ -0.9
CLK1-201ENST00000321356 TMEM174Q8WUU8 243 aa9.43□□□□□ -0.9
CLK1-201ENST00000321356 FMO2Q99518 471 aa9.43□□□□□ -0.9
CLK1-201ENST00000321356 ERP44Q9BS26 406 aa9.43□□□□□ -0.9
CLK1-201ENST00000321356 CENPHQ9H3R5 247 aa9.43□□□□□ -0.9
CLK1-201ENST00000321356 VCPKMTQ9H867 229 aa9.43□□□□□ -0.9
CLK1-201ENST00000321356 PPANQ9NQ55 473 aaKnown RBP9.43□□□□□ -0.9
CLK1-201ENST00000321356 KCNQ5Q9NR82 932 aa9.43□□□□□ -0.9
CLK1-201ENST00000321356 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.43□□□□□ -0.9
CLK1-201ENST00000321356 TAS2R14Q9NYV8 317 aa9.43□□□□□ -0.9
CLK1-201ENST00000321356 COG5Q9UP83 839 aa9.43□□□□□ -0.9
CLK1-201ENST00000321356 FRMD4BQ9Y2L6 1034 aa9.43□□□□□ -0.9
CLK1-201ENST00000321356 SPATA31A6Q5VVP1 1343 aa9.43□□□□□ -0.9
CLK1-201ENST00000321356 EP400Q96L91 3159 aa9.43□□□□□ -0.9
CLK1-201ENST00000321356 A0A1W2PRG0 241 aa9.42□□□□□ -0.9
CLK1-201ENST00000321356 TRIM37O94972 964 aa9.42□□□□□ -0.9
CLK1-201ENST00000321356 TRIM49P0CI25 452 aa9.42□□□□□ -0.9
CLK1-201ENST00000321356 TRIM49CP0CI26 452 aa9.42□□□□□ -0.9
CLK1-201ENST00000321356 ABCB4P21439 1286 aa9.42□□□□□ -0.9
CLK1-201ENST00000321356 DR1Q01658 176 aa9.42□□□□□ -0.9
CLK1-201ENST00000321356 ACTN3Q08043 901 aaPredicted RBP9.42□□□□□ -0.9
CLK1-201ENST00000321356 BFSP1Q12934 665 aa9.42□□□□□ -0.9
CLK1-201ENST00000321356 TRAF1Q13077 416 aa9.42□□□□□ -0.9
CLK1-201ENST00000321356 IKQ13123 557 aaPredicted RBP9.42□□□□□ -0.9
CLK1-201ENST00000321356 KRT71Q3SY84 523 aa9.42□□□□□ -0.9
CLK1-201ENST00000321356 DACT2Q5SW24 774 aa9.42□□□□□ -0.9
CLK1-201ENST00000321356 STRIP1Q5VSL9 837 aa9.42□□□□□ -0.9
CLK1-201ENST00000321356 C11orf63Q6NUN7 778 aa9.42□□□□□ -0.9
CLK1-201ENST00000321356 KSR1Q8IVT5 923 aa9.42□□□□□ -0.9
CLK1-201ENST00000321356 TPH2Q8IWU9 490 aa9.42□□□□□ -0.9
CLK1-201ENST00000321356 RHOT2Q8IXI1 618 aa9.42□□□□□ -0.9
CLK1-201ENST00000321356 FAM178BQ8IXR5 827 aa9.42□□□□□ -0.9
CLK1-201ENST00000321356 ALG3Q92685 438 aa9.42□□□□□ -0.9
CLK1-201ENST00000321356 TATDN2Q93075 761 aa9.42□□□□□ -0.9
CLK1-201ENST00000321356 CENPTQ96BT3 561 aa9.42□□□□□ -0.9
CLK1-201ENST00000321356 GJD4Q96KN9 370 aaPredicted RBP9.42□□□□□ -0.9
CLK1-201ENST00000321356 NACC1Q96RE7 527 aa9.42□□□□□ -0.9
CLK1-201ENST00000321356 THAP2Q9H0W7 228 aa9.42□□□□□ -0.9
CLK1-201ENST00000321356 DPH5Q9H2P9 285 aa9.42□□□□□ -0.9
CLK1-201ENST00000321356 LRRC4CQ9HCJ2 640 aa9.42□□□□□ -0.9
CLK1-201ENST00000321356 ERVK-5Q9HDB9 667 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms