RNA–Protein interactions for RNA: ENST00000319533.9

RPP40-201, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 1 (best) BASIC

Gene RPP40, Length 1,088 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-201ENST00000319533 CYP3A7P24462 503 aa16.03■□□□□ 0.16
RPP40-201ENST00000319533 PDIA3P30101 505 aaKnown RBP16.03■□□□□ 0.16
RPP40-201ENST00000319533 PBX3P40426 434 aa16.03■□□□□ 0.16
RPP40-201ENST00000319533 PTPN5P54829 565 aa16.03■□□□□ 0.16
RPP40-201ENST00000319533 IER5LQ5T953 404 aa16.03■□□□□ 0.16
RPP40-201ENST00000319533 LRCH2Q5VUJ6 765 aa16.03■□□□□ 0.16
RPP40-201ENST00000319533 CASP10Q92851 521 aa16.03■□□□□ 0.16
RPP40-201ENST00000319533 TEKT3Q9BXF9 490 aa16.03■□□□□ 0.16
RPP40-201ENST00000319533 SLC26A6Q9BXS9 759 aa16.03■□□□□ 0.16
RPP40-201ENST00000319533 DACT1Q9NYF0 836 aa16.03■□□□□ 0.16
RPP40-201ENST00000319533 KMT2EQ8IZD2 1858 aa16.02■□□□□ 0.16
RPP40-201ENST00000319533 C2orf71A6NGG8 1288 aa16.02■□□□□ 0.16
RPP40-201ENST00000319533 TBC1D8BQ0IIM8 1120 aa16.02■□□□□ 0.16
RPP40-201ENST00000319533 DRP2Q13474 957 aa16.02■□□□□ 0.16
RPP40-201ENST00000319533 SMC1AQ14683 1233 aaKnown RBP16.02■□□□□ 0.16
RPP40-201ENST00000319533 XKR3Q5GH77 459 aa16.02■□□□□ 0.16
RPP40-201ENST00000319533 TMC7Q7Z402 723 aa16.02■□□□□ 0.16
RPP40-201ENST00000319533 SUGP1Q8IWZ8 645 aaKnown RBP16.02■□□□□ 0.16
RPP40-201ENST00000319533 MBOAT7Q96N66 472 aa16.02■□□□□ 0.16
RPP40-201ENST00000319533 MRPL9Q9BYD2 267 aaKnown RBP16.02■□□□□ 0.16
RPP40-201ENST00000319533 C22orf23Q9BZE7 217 aa16.02■□□□□ 0.16
RPP40-201ENST00000319533 CARNS1A5YM72 827 aa16.01■□□□□ 0.15
RPP40-201ENST00000319533 M0R2N6 131 aa16.01■□□□□ 0.15
RPP40-201ENST00000319533 CLASP2O75122 1294 aaKnown RBP16.01■□□□□ 0.15
RPP40-201ENST00000319533 FGFR4P22455 802 aa16.01■□□□□ 0.15
RPP40-201ENST00000319533 PSMA5P28066 241 aa16.01■□□□□ 0.15
RPP40-201ENST00000319533 TCF15Q12870 199 aa16.01■□□□□ 0.15
RPP40-201ENST00000319533 TPRNQ4KMQ1 711 aa16.01■□□□□ 0.15
RPP40-201ENST00000319533 LLGL2Q6P1M3 1020 aa16.01■□□□□ 0.15
RPP40-201ENST00000319533 MOXD1Q6UVY6 613 aa16.01■□□□□ 0.15
RPP40-201ENST00000319533 FAM177A1Q8N128 213 aaPredicted RBP16.01■□□□□ 0.15
RPP40-201ENST00000319533 HELQQ8TDG4 1101 aa16.01■□□□□ 0.15
RPP40-201ENST00000319533 TBCKQ8TEA7 893 aa16.01■□□□□ 0.15
RPP40-201ENST00000319533 NLRP7Q8WX94 980 aa16.01■□□□□ 0.15
RPP40-201ENST00000319533 ZNF668Q96K58 619 aaPredicted RBP16.01■□□□□ 0.15
RPP40-201ENST00000319533 GCOM2Q9BZD3 368 aaPredicted RBP16.01■□□□□ 0.15
RPP40-201ENST00000319533 ADAM7Q9H2U9 754 aa16.01■□□□□ 0.15
RPP40-201ENST00000319533 PCDHA4Q9UN74 947 aa16.01■□□□□ 0.15
RPP40-201ENST00000319533 HCFC2Q9Y5Z7 792 aa16.01■□□□□ 0.15
RPP40-201ENST00000319533 IRAK3Q9Y616 596 aa16.01■□□□□ 0.15
RPP40-201ENST00000319533 CACNA1HO95180 2353 aa16.01■□□□□ 0.15
RPP40-201ENST00000319533 CHMP2AO43633 222 aa16■□□□□ 0.15
RPP40-201ENST00000319533 PHKA2P46019 1235 aa16■□□□□ 0.15
RPP40-201ENST00000319533 BCAR1P56945 870 aa16■□□□□ 0.15
RPP40-201ENST00000319533 NLRP5P59047 1200 aa16■□□□□ 0.15
RPP40-201ENST00000319533 ITIH3Q06033 890 aa16■□□□□ 0.15
RPP40-201ENST00000319533 MIER3Q7Z3K6 550 aa16■□□□□ 0.15
RPP40-201ENST00000319533 ZNF410Q86VK4 478 aa16■□□□□ 0.15
RPP40-201ENST00000319533 DAGLBQ8NCG7 672 aa16■□□□□ 0.15
RPP40-201ENST00000319533 RNF169Q8NCN4 708 aa16■□□□□ 0.15
RPP40-201ENST00000319533 ETNPPLQ8TBG4 499 aa16■□□□□ 0.15
RPP40-201ENST00000319533 GJA10Q969M2 543 aa16■□□□□ 0.15
RPP40-201ENST00000319533 NECTIN4Q96NY8 510 aa16■□□□□ 0.15
RPP40-201ENST00000319533 NCOA5Q9HCD5 579 aaKnown RBP16■□□□□ 0.15
RPP40-201ENST00000319533 NR2E1Q9Y466 385 aa16■□□□□ 0.15
RPP40-201ENST00000319533 ZNF623O75123 536 aa15.99■□□□□ 0.15
RPP40-201ENST00000319533 MAFO75444 373 aaPredicted RBP15.99■□□□□ 0.15
RPP40-201ENST00000319533 TDP2O95551 362 aa15.99■□□□□ 0.15
RPP40-201ENST00000319533 SKIP12755 728 aa15.99■□□□□ 0.15
RPP40-201ENST00000319533 ALDH7A1P49419 539 aaKnown RBP15.99■□□□□ 0.15
RPP40-201ENST00000319533 CCT2P78371 535 aaKnown RBP15.99■□□□□ 0.15
RPP40-201ENST00000319533 NPY5RQ15761 445 aa15.99■□□□□ 0.15
RPP40-201ENST00000319533 MTERF2Q49AM1 385 aa15.99■□□□□ 0.15
RPP40-201ENST00000319533 SCLT1Q96NL6 688 aa15.99■□□□□ 0.15
RPP40-201ENST00000319533 PHOX2BQ99453 314 aa15.99■□□□□ 0.15
RPP40-201ENST00000319533 INO80BQ9C086 356 aaPredicted RBP15.99■□□□□ 0.15
RPP40-201ENST00000319533 ZBP1Q9H171 429 aa15.99■□□□□ 0.15
RPP40-201ENST00000319533 SEPT9Q9UHD8 586 aaPredicted RBP15.99■□□□□ 0.15
RPP40-201ENST00000319533 USP34Q70CQ2 3546 aa15.99■□□□□ 0.15
RPP40-201ENST00000319533 A0A087WZ62 844 aa15.98■□□□□ 0.15
RPP40-201ENST00000319533 EPB41L2O43491 1005 aaKnown RBP15.98■□□□□ 0.15
RPP40-201ENST00000319533 CSDE1O75534 798 aaKnown RBP15.98■□□□□ 0.15
RPP40-201ENST00000319533 CXCL14O95715 111 aa15.98■□□□□ 0.15
RPP40-201ENST00000319533 SFPQP23246 707 aaKnown RBP eCLIP15.98■□□□□ 0.15
RPP40-201ENST00000319533 DNM2P50570 870 aa15.98■□□□□ 0.15
RPP40-201ENST00000319533 NUBP1P53384 320 aa15.98■□□□□ 0.15
RPP40-201ENST00000319533 POLGP54098 1239 aaPredicted RBP15.98■□□□□ 0.15
RPP40-201ENST00000319533 VCPP55072 806 aaKnown RBP15.98■□□□□ 0.15
RPP40-201ENST00000319533 TOB2Q14106 344 aaPredicted RBP15.98■□□□□ 0.15
RPP40-201ENST00000319533 BMS1Q14692 1282 aaKnown RBP15.98■□□□□ 0.15
RPP40-201ENST00000319533 GALNT17Q6IS24 598 aa15.98■□□□□ 0.15
RPP40-201ENST00000319533 CES5AQ6NT32 575 aa15.98■□□□□ 0.15
RPP40-201ENST00000319533 DDX53Q86TM3 631 aaKnown RBP15.98■□□□□ 0.15
RPP40-201ENST00000319533 TRIM22Q8IYM9 498 aa15.98■□□□□ 0.15
RPP40-201ENST00000319533 BLIDQ8IZY5 108 aa15.98■□□□□ 0.15
RPP40-201ENST00000319533 TMEM169Q96HH4 297 aa15.98■□□□□ 0.15
RPP40-201ENST00000319533 FDXACB1Q9BRP7 624 aaPredicted RBP15.98■□□□□ 0.15
RPP40-201ENST00000319533 APOL5Q9BWW9 433 aa15.98■□□□□ 0.15
RPP40-201ENST00000319533 POMKQ9H5K3 350 aa15.98■□□□□ 0.15
RPP40-201ENST00000319533 ZSWIM6Q9HCJ5 1215 aa15.98■□□□□ 0.15
RPP40-201ENST00000319533 SUCLA2Q9P2R7 463 aaPredicted RBP15.98■□□□□ 0.15
RPP40-201ENST00000319533 TMEM150BA6NC51 233 aa15.97■□□□□ 0.15
RPP40-201ENST00000319533 NT5C1B-RDH14C9J2C7 533 aa15.97■□□□□ 0.15
RPP40-201ENST00000319533 DEXIO95424 95 aa15.97■□□□□ 0.15
RPP40-201ENST00000319533 CTSAP10619 480 aa15.97■□□□□ 0.15
RPP40-201ENST00000319533 AVPR2P30518 371 aa15.97■□□□□ 0.15
RPP40-201ENST00000319533 MTHFRP42898 656 aa15.97■□□□□ 0.15
RPP40-201ENST00000319533 RAB27AP51159 221 aa15.97■□□□□ 0.15
RPP40-201ENST00000319533 SSRP1Q08945 709 aaKnown RBP15.97■□□□□ 0.15
RPP40-201ENST00000319533 GIT2Q14161 759 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms