RNA–Protein interactions for RNA: ENST00000319223.8

LRRC42-201, Transcript of leucine rich repeat containing 42, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRC42, Length 1,727 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC42-201ENST00000319223 RUSC1Q9BVN2 902 aa18.44■□□□□ 0.54
LRRC42-201ENST00000319223 CCSER1Q9C0I3 900 aa18.44■□□□□ 0.54
LRRC42-201ENST00000319223 BLOC1S4Q9NUP1 217 aa18.44■□□□□ 0.54
LRRC42-201ENST00000319223 ARHGEF15O94989 841 aa18.43■□□□□ 0.54
LRRC42-201ENST00000319223 GJB5O95377 273 aa18.43■□□□□ 0.54
LRRC42-201ENST00000319223 PLCG1P19174 1290 aa18.43■□□□□ 0.54
LRRC42-201ENST00000319223 DSC3Q14574 896 aa18.43■□□□□ 0.54
LRRC42-201ENST00000319223 RINT1Q6NUQ1 792 aa18.43■□□□□ 0.54
LRRC42-201ENST00000319223 CDK5RAP3Q96JB5 506 aa18.43■□□□□ 0.54
LRRC42-201ENST00000319223 ADAM2Q99965 735 aa18.43■□□□□ 0.54
LRRC42-201ENST00000319223 NT5C3AQ9H0P0 336 aa18.43■□□□□ 0.54
LRRC42-201ENST00000319223 TSPYL2Q9H2G4 693 aaPredicted RBP18.43■□□□□ 0.54
LRRC42-201ENST00000319223 NKX2-4Q9H2Z4 354 aa18.43■□□□□ 0.54
LRRC42-201ENST00000319223 LCHNA4D1U4 455 aa18.43■□□□□ 0.54
LRRC42-201ENST00000319223 ASAP2O43150 1006 aa18.43■□□□□ 0.54
LRRC42-201ENST00000319223 SLC12A3P55017 1021 aa18.43■□□□□ 0.54
LRRC42-201ENST00000319223 MXD4Q14582 209 aaPredicted RBP18.43■□□□□ 0.54
LRRC42-201ENST00000319223 C1orf186Q6ZWK4 172 aa18.43■□□□□ 0.54
LRRC42-201ENST00000319223 MCPH1Q8NEM0 835 aa18.43■□□□□ 0.54
LRRC42-201ENST00000319223 TIFAQ96CG3 184 aa18.43■□□□□ 0.54
LRRC42-201ENST00000319223 CALML4Q96GE6 196 aa18.43■□□□□ 0.54
LRRC42-201ENST00000319223 FTHL17Q9BXU8 183 aa18.43■□□□□ 0.54
LRRC42-201ENST00000319223 TTYH1Q9H313 450 aaPredicted RBP18.43■□□□□ 0.54
LRRC42-201ENST00000319223 PCDHA11Q9Y5I1 949 aa18.43■□□□□ 0.54
LRRC42-201ENST00000319223 PPP6R2O75170 966 aa18.42■□□□□ 0.54
LRRC42-201ENST00000319223 SSBP05455 408 aaKnown RBP eCLIP18.42■□□□□ 0.54
LRRC42-201ENST00000319223 PLA2G4BP0C869 781 aa18.42■□□□□ 0.54
LRRC42-201ENST00000319223 CRIPAKQ8N1N5 446 aa18.42■□□□□ 0.54
LRRC42-201ENST00000319223 SYT2Q8N9I0 419 aaPredicted RBP18.42■□□□□ 0.54
LRRC42-201ENST00000319223 FAM161BQ96MY7 647 aa18.42■□□□□ 0.54
LRRC42-201ENST00000319223 RGS18Q9NS28 235 aa18.42■□□□□ 0.54
LRRC42-201ENST00000319223 CHD9Q3L8U1 2897 aa18.41■□□□□ 0.54
LRRC42-201ENST00000319223 A0A087X0B3 334 aa18.41■□□□□ 0.54
LRRC42-201ENST00000319223 SLC26A4O43511 780 aa18.41■□□□□ 0.54
LRRC42-201ENST00000319223 TLL1O43897 1013 aa18.41■□□□□ 0.54
LRRC42-201ENST00000319223 CA3P07451 260 aa18.41■□□□□ 0.54
LRRC42-201ENST00000319223 IBSPP21815 317 aaPredicted RBP18.41■□□□□ 0.54
LRRC42-201ENST00000319223 PTENP60484 403 aa18.41■□□□□ 0.54
LRRC42-201ENST00000319223 RAB30Q15771 203 aa18.41■□□□□ 0.54
LRRC42-201ENST00000319223 SPRED2Q7Z698 418 aa18.41■□□□□ 0.54
LRRC42-201ENST00000319223 DAW1Q8N136 415 aa18.41■□□□□ 0.54
LRRC42-201ENST00000319223 ZBED2Q9BTP6 218 aa18.41■□□□□ 0.54
LRRC42-201ENST00000319223 PANK2Q9BZ23 570 aa18.41■□□□□ 0.54
LRRC42-201ENST00000319223 MSRAQ9UJ68 235 aa18.41■□□□□ 0.54
LRRC42-201ENST00000319223 NPHP3-ACAD11A0A0J9YXS1 232 aa18.4■□□□□ 0.54
LRRC42-201ENST00000319223 RAD51AP2Q09MP3 1159 aa18.4■□□□□ 0.54
LRRC42-201ENST00000319223 MAPK7Q13164 816 aa18.4■□□□□ 0.54
LRRC42-201ENST00000319223 DHX8Q14562 1220 aaKnown RBP18.4■□□□□ 0.54
LRRC42-201ENST00000319223 MCM6Q14566 821 aa18.4■□□□□ 0.54
LRRC42-201ENST00000319223 ARSHQ5FYA8 562 aa18.4■□□□□ 0.54
LRRC42-201ENST00000319223 ODR4Q5SWX8 454 aa18.4■□□□□ 0.54
LRRC42-201ENST00000319223 AXDND1Q5T1B0 1012 aaPredicted RBP18.4■□□□□ 0.54
LRRC42-201ENST00000319223 ATL3Q6DD88 541 aa18.4■□□□□ 0.54
LRRC42-201ENST00000319223 GPR153Q6NV75 609 aa18.4■□□□□ 0.54
LRRC42-201ENST00000319223 SRGAP1Q7Z6B7 1085 aa18.4■□□□□ 0.54
LRRC42-201ENST00000319223 RCOR1Q9UKL0 485 aa18.4■□□□□ 0.54
LRRC42-201ENST00000319223 TTC3P53804 2025 aa18.4■□□□□ 0.54
LRRC42-201ENST00000319223 DENND3A2RUS2 1198 aa18.4■□□□□ 0.54
LRRC42-201ENST00000319223 C9IYK1 514 aa18.4■□□□□ 0.54
LRRC42-201ENST00000319223 HIP1RO75146 1068 aa18.4■□□□□ 0.54
LRRC42-201ENST00000319223 TFDP1Q14186 410 aa18.4■□□□□ 0.54
LRRC42-201ENST00000319223 CATSPER4Q7RTX7 472 aa18.4■□□□□ 0.54
LRRC42-201ENST00000319223 IFNLR1Q8IU57 520 aaPredicted RBP18.4■□□□□ 0.54
LRRC42-201ENST00000319223 KCTD17Q8N5Z5 321 aa18.4■□□□□ 0.54
LRRC42-201ENST00000319223 RASSF8Q8NHQ8 419 aa18.4■□□□□ 0.54
LRRC42-201ENST00000319223 RAD54LQ92698 747 aa18.4■□□□□ 0.54
LRRC42-201ENST00000319223 RAD9AQ99638 391 aa18.4■□□□□ 0.54
LRRC42-201ENST00000319223 INO80BQ9C086 356 aaPredicted RBP18.4■□□□□ 0.54
LRRC42-201ENST00000319223 SEMA6BQ9H3T3 888 aa18.4■□□□□ 0.54
LRRC42-201ENST00000319223 CFAP45Q9UL16 551 aa18.4■□□□□ 0.54
LRRC42-201ENST00000319223 PCDHA7Q9UN72 937 aa18.4■□□□□ 0.54
LRRC42-201ENST00000319223 LRRIQ4A6NIV6 560 aa18.39■□□□□ 0.53
LRRC42-201ENST00000319223 SFI1A8K8P3 1242 aa18.39■□□□□ 0.53
LRRC42-201ENST00000319223 SFPQP23246 707 aaKnown RBP eCLIP18.39■□□□□ 0.53
LRRC42-201ENST00000319223 PHKA2P46019 1235 aa18.39■□□□□ 0.53
LRRC42-201ENST00000319223 HTRA4P83105 476 aaPredicted RBP18.39■□□□□ 0.53
LRRC42-201ENST00000319223 CACNB1Q02641 598 aaPredicted RBP18.39■□□□□ 0.53
LRRC42-201ENST00000319223 MBTD1Q05BQ5 628 aa18.39■□□□□ 0.53
LRRC42-201ENST00000319223 POU5F1BQ06416 359 aa18.39■□□□□ 0.53
LRRC42-201ENST00000319223 NAALADL2Q58DX5 795 aa18.39■□□□□ 0.53
LRRC42-201ENST00000319223 SHC4Q6S5L8 630 aa18.39■□□□□ 0.53
LRRC42-201ENST00000319223 DEFB123Q8N688 67 aa18.39■□□□□ 0.53
LRRC42-201ENST00000319223 KIFC3Q9BVG8 833 aa18.39■□□□□ 0.53
LRRC42-201ENST00000319223 INO80B-WBP1J3KQ70 363 aa18.38■□□□□ 0.53
LRRC42-201ENST00000319223 CUTAO60888 179 aa18.38■□□□□ 0.53
LRRC42-201ENST00000319223 NCLP19338 710 aaKnown RBP18.38■□□□□ 0.53
LRRC42-201ENST00000319223 HOXA11P31270 313 aaPredicted RBP18.38■□□□□ 0.53
LRRC42-201ENST00000319223 SARSP49591 514 aaKnown RBP18.38■□□□□ 0.53
LRRC42-201ENST00000319223 FAM189BP81408 668 aa18.38■□□□□ 0.53
LRRC42-201ENST00000319223 ZNF697Q5TEC3 545 aa18.38■□□□□ 0.53
LRRC42-201ENST00000319223 SLC24A5Q71RS6 500 aa18.38■□□□□ 0.53
LRRC42-201ENST00000319223 KCNG4Q8TDN1 519 aa18.38■□□□□ 0.53
LRRC42-201ENST00000319223 ZNF576Q9H609 170 aa18.38■□□□□ 0.53
LRRC42-201ENST00000319223 ADGRA3Q8IWK6 1321 aa18.38■□□□□ 0.53
LRRC42-201ENST00000319223 COL4A6Q14031 1691 aa18.38■□□□□ 0.53
LRRC42-201ENST00000319223 ZSCAN20P17040 1043 aaPredicted RBP18.37■□□□□ 0.53
LRRC42-201ENST00000319223 GUCY2CP25092 1073 aa18.37■□□□□ 0.53
LRRC42-201ENST00000319223 GATMP50440 423 aa18.37■□□□□ 0.53
LRRC42-201ENST00000319223 AMHR2Q16671 573 aa18.37■□□□□ 0.53
LRRC42-201ENST00000319223 RRAGBQ5VZM2 374 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 1200.4 ms