RNA–Protein interactions for RNA: ENST00000316097.12

SCAMP4-201, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP4, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-201ENST00000316097 PROCA1Q8NCQ7 364 aaPredicted RBP18.68■□□□□ 0.58
SCAMP4-201ENST00000316097 GLIS3Q8NEA6 775 aa18.68■□□□□ 0.58
SCAMP4-201ENST00000316097 SLC38A10Q9HBR0 1119 aa18.68■□□□□ 0.58
SCAMP4-201ENST00000316097 SLC12A6Q9UHW9 1150 aa18.68■□□□□ 0.58
SCAMP4-201ENST00000316097 DNM1LO00429 736 aa18.67■□□□□ 0.58
SCAMP4-201ENST00000316097 KCNK3O14649 394 aa18.67■□□□□ 0.58
SCAMP4-201ENST00000316097 MYBP10242 640 aa18.67■□□□□ 0.58
SCAMP4-201ENST00000316097 ECHS1P30084 290 aa18.67■□□□□ 0.58
SCAMP4-201ENST00000316097 ELF1P32519 619 aa18.67■□□□□ 0.58
SCAMP4-201ENST00000316097 POLR2FP61218 127 aaKnown RBP18.67■□□□□ 0.58
SCAMP4-201ENST00000316097 LRRC63Q05C16 580 aa18.67■□□□□ 0.58
SCAMP4-201ENST00000316097 CYB5D1Q6P9G0 228 aa18.67■□□□□ 0.58
SCAMP4-201ENST00000316097 CATSPER3Q86XQ3 398 aa18.67■□□□□ 0.58
SCAMP4-201ENST00000316097 IL31RAQ8NI17 732 aa18.67■□□□□ 0.58
SCAMP4-201ENST00000316097 TAF4BQ92750 862 aa18.67■□□□□ 0.58
SCAMP4-201ENST00000316097 DDX12PQ92771 950 aa18.67■□□□□ 0.58
SCAMP4-201ENST00000316097 LSM14BQ9BX40 385 aaKnown RBP18.67■□□□□ 0.58
SCAMP4-201ENST00000316097 EDEM3Q9BZQ6 932 aa18.67■□□□□ 0.58
SCAMP4-201ENST00000316097 HAUS2Q9NVX0 235 aa18.67■□□□□ 0.58
SCAMP4-201ENST00000316097 CEP72Q9P209 647 aa18.67■□□□□ 0.58
SCAMP4-201ENST00000316097 PPP1R9AQ9ULJ8 1098 aa18.67■□□□□ 0.58
SCAMP4-201ENST00000316097 EML1O00423 815 aa18.67■□□□□ 0.58
SCAMP4-201ENST00000316097 TRAPPC3O43617 180 aa18.67■□□□□ 0.58
SCAMP4-201ENST00000316097 ATP2C2O75185 946 aa18.67■□□□□ 0.58
SCAMP4-201ENST00000316097 ARP10275 920 aa18.67■□□□□ 0.58
SCAMP4-201ENST00000316097 NF2P35240 595 aa18.67■□□□□ 0.58
SCAMP4-201ENST00000316097 ZNF844Q08AG5 666 aa18.67■□□□□ 0.58
SCAMP4-201ENST00000316097 SNCBQ16143 134 aa18.67■□□□□ 0.58
SCAMP4-201ENST00000316097 TMEM119Q4V9L6 283 aa18.67■□□□□ 0.58
SCAMP4-201ENST00000316097 N4BP2L2Q92802 583 aaPredicted RBP18.67■□□□□ 0.58
SCAMP4-201ENST00000316097 TACO1Q9BSH4 297 aaKnown RBP18.67■□□□□ 0.58
SCAMP4-201ENST00000316097 RGL1Q9NZL6 768 aa18.67■□□□□ 0.58
SCAMP4-201ENST00000316097 A0A087X0T9 212 aa18.67■□□□□ 0.58
SCAMP4-201ENST00000316097 H0YGN5 161 aa18.67■□□□□ 0.58
SCAMP4-201ENST00000316097 NOL4O94818 638 aa18.67■□□□□ 0.58
SCAMP4-201ENST00000316097 FAM228BP0C875 321 aa18.67■□□□□ 0.58
SCAMP4-201ENST00000316097 PTPROQ16827 1216 aa18.67■□□□□ 0.58
SCAMP4-201ENST00000316097 PARP9Q8IXQ6 854 aa18.67■□□□□ 0.58
SCAMP4-201ENST00000316097 SLFN12Q8IYM2 578 aa18.67■□□□□ 0.58
SCAMP4-201ENST00000316097 FUKQ8N0W3 1084 aa18.67■□□□□ 0.58
SCAMP4-201ENST00000316097 NAP1L4Q99733 375 aaKnown RBP18.67■□□□□ 0.58
SCAMP4-201ENST00000316097 ADAMTS1Q9UHI8 967 aa18.67■□□□□ 0.58
SCAMP4-201ENST00000316097 ODF2LQ9ULJ1 636 aa18.67■□□□□ 0.58
SCAMP4-201ENST00000316097 NFS1Q9Y697 457 aa18.67■□□□□ 0.58
SCAMP4-201ENST00000316097 CIITAP33076 1130 aa18.66■□□□□ 0.58
SCAMP4-201ENST00000316097 RAPGEF1Q13905 1077 aa18.66■□□□□ 0.58
SCAMP4-201ENST00000316097 SLC18A3Q16572 532 aa18.66■□□□□ 0.58
SCAMP4-201ENST00000316097 ANKRD20A8PQ5CZ79 823 aa18.66■□□□□ 0.58
SCAMP4-201ENST00000316097 UBLCP1Q8WVY7 318 aaPredicted RBP18.66■□□□□ 0.58
SCAMP4-201ENST00000316097 SEC16BQ96JE7 1060 aa18.66■□□□□ 0.58
SCAMP4-201ENST00000316097 TSG101Q99816 390 aa18.66■□□□□ 0.58
SCAMP4-201ENST00000316097 GOLPH3Q9H4A6 298 aa18.66■□□□□ 0.58
SCAMP4-201ENST00000316097 TBC1D7Q9P0N9 293 aa18.66■□□□□ 0.58
SCAMP4-201ENST00000316097 SBF1O95248 1867 aa18.66■□□□□ 0.58
SCAMP4-201ENST00000316097 VWA5AO00534 786 aa18.66■□□□□ 0.58
SCAMP4-201ENST00000316097 MOXD1Q6UVY6 613 aa18.66■□□□□ 0.58
SCAMP4-201ENST00000316097 LRRC45Q96CN5 670 aa18.66■□□□□ 0.58
SCAMP4-201ENST00000316097 SCLT1Q96NL6 688 aa18.66■□□□□ 0.58
SCAMP4-201ENST00000316097 NEUROG2Q9H2A3 272 aa18.66■□□□□ 0.58
SCAMP4-201ENST00000316097 ADARB2Q9NS39 739 aaKnown RBP18.66■□□□□ 0.58
SCAMP4-201ENST00000316097 CNOT8Q9UFF9 292 aaKnown RBP18.66■□□□□ 0.58
SCAMP4-201ENST00000316097 TMEM59LQ9UK28 342 aa18.66■□□□□ 0.58
SCAMP4-201ENST00000316097 CTDP1Q9Y5B0 961 aaPredicted RBP18.66■□□□□ 0.58
SCAMP4-201ENST00000316097 PVALEFA0A1B0GWK0 134 aa18.65■□□□□ 0.58
SCAMP4-201ENST00000316097 ZBTB39O15060 712 aa18.65■□□□□ 0.58
SCAMP4-201ENST00000316097 KIF1CO43896 1103 aaKnown RBP18.65■□□□□ 0.58
SCAMP4-201ENST00000316097 CYP3A4P08684 503 aa18.65■□□□□ 0.58
SCAMP4-201ENST00000316097 SPATA31C1P0DKV0 1188 aa18.65■□□□□ 0.58
SCAMP4-201ENST00000316097 RPS6KA1Q15418 735 aa18.65■□□□□ 0.58
SCAMP4-201ENST00000316097 WLSQ5T9L3 541 aa18.65■□□□□ 0.58
SCAMP4-201ENST00000316097 DCPSQ96C86 337 aaKnown RBP18.65■□□□□ 0.58
SCAMP4-201ENST00000316097 NUCKS1Q9H1E3 243 aaKnown RBP18.65■□□□□ 0.58
SCAMP4-201ENST00000316097 STK17AQ9UEE5 414 aa18.65■□□□□ 0.58
SCAMP4-201ENST00000316097 DDX39AO00148 427 aaKnown RBP18.65■□□□□ 0.58
SCAMP4-201ENST00000316097 CUL1Q13616 776 aa18.65■□□□□ 0.58
SCAMP4-201ENST00000316097 VGLL4Q14135 290 aa18.65■□□□□ 0.58
SCAMP4-201ENST00000316097 NSMFQ6X4W1 530 aa18.65■□□□□ 0.58
SCAMP4-201ENST00000316097 RUFY4Q6ZNE9 571 aa18.65■□□□□ 0.58
SCAMP4-201ENST00000316097 FAM228AQ86W67 206 aa18.65■□□□□ 0.58
SCAMP4-201ENST00000316097 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP18.65■□□□□ 0.583e-6■■■■■ 50.8
SCAMP4-201ENST00000316097 AP1M1Q9BXS5 423 aa18.65■□□□□ 0.58
SCAMP4-201ENST00000316097 BCAS3Q9H6U6 928 aa18.65■□□□□ 0.58
SCAMP4-201ENST00000316097 VAV3Q9UKW4 847 aa18.65■□□□□ 0.58
SCAMP4-201ENST00000316097 NOVA2Q9UNW9 492 aaKnown RBP18.65■□□□□ 0.58
SCAMP4-201ENST00000316097 CEP104O60308 925 aa18.64■□□□□ 0.57
SCAMP4-201ENST00000316097 PPP2R2AP63151 447 aa18.64■□□□□ 0.57
SCAMP4-201ENST00000316097 BIRC3Q13489 604 aa18.64■□□□□ 0.57
SCAMP4-201ENST00000316097 SUPT20HL1Q3ZLR7 823 aa18.64■□□□□ 0.57
SCAMP4-201ENST00000316097 CACNA2D3Q8IZS8 1091 aa18.64■□□□□ 0.57
SCAMP4-201ENST00000316097 FAM133AQ8N9E0 248 aa18.64■□□□□ 0.57
SCAMP4-201ENST00000316097 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.64■□□□□ 0.575e-10■□□□□ 9.2
SCAMP4-201ENST00000316097 SGSM3Q96HU1 749 aa18.64■□□□□ 0.57
SCAMP4-201ENST00000316097 TAAR1Q96RJ0 339 aa18.64■□□□□ 0.57
SCAMP4-201ENST00000316097 AS3MTQ9HBK9 375 aa18.64■□□□□ 0.57
SCAMP4-201ENST00000316097 FBXL5Q9UKA1 691 aa18.64■□□□□ 0.57
SCAMP4-201ENST00000316097 COL4A3BPQ9Y5P4 624 aa18.64■□□□□ 0.57
SCAMP4-201ENST00000316097 SCP2P22307 547 aa18.64■□□□□ 0.57
SCAMP4-201ENST00000316097 RPS6P62753 249 aaKnown RBP18.64■□□□□ 0.57
SCAMP4-201ENST00000316097 KLHL30Q0D2K2 578 aa18.64■□□□□ 0.57
SCAMP4-201ENST00000316097 TRAF1Q13077 416 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms