RNA–Protein interactions for RNA: ENST00000315585.11

CHFR-202, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 2,446 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-202ENST00000315585 HEXIM1O94992 359 aaKnown RBP16.22■□□□□ 0.19
CHFR-202ENST00000315585 SOX5P35711 763 aa16.22■□□□□ 0.19
CHFR-202ENST00000315585 SNRPFP62306 86 aaKnown RBP16.22■□□□□ 0.19
CHFR-202ENST00000315585 PPP2R5EQ16537 467 aa16.22■□□□□ 0.19
CHFR-202ENST00000315585 SULF1Q8IWU6 871 aa16.22■□□□□ 0.19
CHFR-202ENST00000315585 MREGQ8N565 214 aa16.22■□□□□ 0.19
CHFR-202ENST00000315585 SLC17A8Q8NDX2 589 aa16.22■□□□□ 0.19
CHFR-202ENST00000315585 SUCLA2Q9P2R7 463 aaPredicted RBP16.22■□□□□ 0.19
CHFR-202ENST00000315585 IPO5O00410 1097 aaKnown RBP16.21■□□□□ 0.19
CHFR-202ENST00000315585 VWA5AO00534 786 aa16.21■□□□□ 0.19
CHFR-202ENST00000315585 KCNK3O14649 394 aa16.21■□□□□ 0.19
CHFR-202ENST00000315585 DDNO94850 711 aaPredicted RBP16.21■□□□□ 0.19
CHFR-202ENST00000315585 KRT13P13646 458 aa16.21■□□□□ 0.19
CHFR-202ENST00000315585 FMO5P49326 533 aa16.21■□□□□ 0.19
CHFR-202ENST00000315585 CASP4P49662 377 aa16.21■□□□□ 0.19
CHFR-202ENST00000315585 CUL1Q13616 776 aa16.21■□□□□ 0.19
CHFR-202ENST00000315585 PRAMEF18Q5VWM3 479 aa16.21■□□□□ 0.19
CHFR-202ENST00000315585 PEX26Q7Z412 305 aa16.21■□□□□ 0.19
CHFR-202ENST00000315585 SYCP3Q8IZU3 236 aa16.21■□□□□ 0.19
CHFR-202ENST00000315585 TMEM174Q8WUU8 243 aa16.21■□□□□ 0.19
CHFR-202ENST00000315585 GDAP1L1Q96MZ0 367 aa16.21■□□□□ 0.19
CHFR-202ENST00000315585 IWS1Q96ST2 819 aa16.21■□□□□ 0.19
CHFR-202ENST00000315585 SH3GL2Q99962 352 aa16.21■□□□□ 0.19
CHFR-202ENST00000315585 TIPINQ9BVW5 301 aa16.21■□□□□ 0.19
CHFR-202ENST00000315585 DMAC2Q9NW81 257 aa16.21■□□□□ 0.19
CHFR-202ENST00000315585 MYPNQ86TC9 1320 aa16.21■□□□□ 0.19
CHFR-202ENST00000315585 AGPSO00116 658 aa16.21■□□□□ 0.19
CHFR-202ENST00000315585 COG2Q14746 738 aa16.21■□□□□ 0.19
CHFR-202ENST00000315585 DPY19L2Q6NUT2 758 aa16.21■□□□□ 0.19
CHFR-202ENST00000315585 GPIHBP1Q8IV16 184 aa16.21■□□□□ 0.19
CHFR-202ENST00000315585 GSPT2Q8IYD1 628 aaKnown RBP16.21■□□□□ 0.19
CHFR-202ENST00000315585 MS4A14Q96JA4 679 aa16.21■□□□□ 0.19
CHFR-202ENST00000315585 TRERF1Q96PN7 1200 aa16.21■□□□□ 0.19
CHFR-202ENST00000315585 SYT17Q9BSW7 474 aa16.21■□□□□ 0.19
CHFR-202ENST00000315585 EPB41L5Q9HCM4 733 aa16.21■□□□□ 0.19
CHFR-202ENST00000315585 SIX2Q9NPC8 291 aa16.21■□□□□ 0.19
CHFR-202ENST00000315585 PGRMC1O00264 195 aaKnown RBP16.2■□□□□ 0.18
CHFR-202ENST00000315585 NFIBO00712 420 aa16.2■□□□□ 0.18
CHFR-202ENST00000315585 P4HA2O15460 535 aa16.2■□□□□ 0.18
CHFR-202ENST00000315585 NMT1P30419 496 aaKnown RBP16.2■□□□□ 0.18
CHFR-202ENST00000315585 DSG3P32926 999 aa16.2■□□□□ 0.18
CHFR-202ENST00000315585 GUCY2DQ02846 1103 aa16.2■□□□□ 0.18
CHFR-202ENST00000315585 PCNX4Q63HM2 1172 aa16.2■□□□□ 0.18
CHFR-202ENST00000315585 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.2■□□□□ 0.18
CHFR-202ENST00000315585 TPCN2Q8NHX9 752 aa16.2■□□□□ 0.18
CHFR-202ENST00000315585 NAP1L3Q99457 506 aaPredicted RBP16.2■□□□□ 0.18
CHFR-202ENST00000315585 PACSIN1Q9BY11 444 aa16.2■□□□□ 0.18
CHFR-202ENST00000315585 AGPAT3Q9NRZ7 376 aa16.2■□□□□ 0.18
CHFR-202ENST00000315585 TMEM59LQ9UK28 342 aa16.2■□□□□ 0.18
CHFR-202ENST00000315585 LOXHD1Q8IVV2 1947 aa16.2■□□□□ 0.18
CHFR-202ENST00000315585 SFI1A8K8P3 1242 aa16.2■□□□□ 0.18
CHFR-202ENST00000315585 P4HBP07237 508 aaKnown RBP16.2■□□□□ 0.18
CHFR-202ENST00000315585 HMGCS2P54868 508 aa16.2■□□□□ 0.18
CHFR-202ENST00000315585 TKFCQ3LXA3 575 aa16.2■□□□□ 0.18
CHFR-202ENST00000315585 CFAP58Q5T655 872 aa16.2■□□□□ 0.18
CHFR-202ENST00000315585 XRRA1Q6P2D8 792 aa16.2■□□□□ 0.18
CHFR-202ENST00000315585 INTS8Q75QN2 995 aaKnown RBP16.2■□□□□ 0.18
CHFR-202ENST00000315585 MAATS1Q7Z4T9 603 aa16.2■□□□□ 0.18
CHFR-202ENST00000315585 SLFN11Q7Z7L1 901 aa16.2■□□□□ 0.18
CHFR-202ENST00000315585 LRRC57Q8N9N7 239 aa16.2■□□□□ 0.18
CHFR-202ENST00000315585 CCDC26Q8TAB7 109 aa16.2■□□□□ 0.18
CHFR-202ENST00000315585 KRT12Q99456 494 aa16.2■□□□□ 0.18
CHFR-202ENST00000315585 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.2■□□□□ 0.184e-6■■■■□ 25.1
CHFR-202ENST00000315585 HOXC10Q9NYD6 342 aa16.2■□□□□ 0.18
CHFR-202ENST00000315585 NENFQ9UMX5 172 aa16.2■□□□□ 0.18
CHFR-202ENST00000315585 RBBP6Q7Z6E9 1792 aaKnown RBP16.19■□□□□ 0.18
CHFR-202ENST00000315585 TMCO5BA8MYB1 307 aa16.19■□□□□ 0.18
CHFR-202ENST00000315585 EXOC3O60645 756 aa16.19■□□□□ 0.18
CHFR-202ENST00000315585 UBXN2AP68543 259 aa16.19■□□□□ 0.18
CHFR-202ENST00000315585 RNF207Q6ZRF8 634 aa16.19■□□□□ 0.18
CHFR-202ENST00000315585 C1orf131Q8NDD1 294 aaKnown RBP16.19■□□□□ 0.18
CHFR-202ENST00000315585 SYTL5Q8TDW5 730 aaPredicted RBP16.19■□□□□ 0.18
CHFR-202ENST00000315585 CTNNBL1Q8WYA6 563 aaPredicted RBP16.19■□□□□ 0.18
CHFR-202ENST00000315585 ATG4CQ96DT6 458 aa16.19■□□□□ 0.18
CHFR-202ENST00000315585 LXNQ9BS40 222 aa16.19■□□□□ 0.18
CHFR-202ENST00000315585 FAM107BQ9H098 131 aa16.19■□□□□ 0.18
CHFR-202ENST00000315585 UNC45AQ9H3U1 944 aa16.19■□□□□ 0.18
CHFR-202ENST00000315585 AMFRQ9UKV5 643 aa16.19■□□□□ 0.18
CHFR-202ENST00000315585 SMCHD1A6NHR9 2005 aa16.19■□□□□ 0.18
CHFR-202ENST00000315585 F8VZ95 297 aa16.19■□□□□ 0.18
CHFR-202ENST00000315585 CEP104O60308 925 aa16.19■□□□□ 0.18
CHFR-202ENST00000315585 USP2O75604 605 aaPredicted RBP16.19■□□□□ 0.18
CHFR-202ENST00000315585 TMEM253P0C7T8 217 aa16.19■□□□□ 0.18
CHFR-202ENST00000315585 SH3D19Q5HYK7 790 aa16.19■□□□□ 0.18
CHFR-202ENST00000315585 B3GNT9Q6UX72 402 aa16.19■□□□□ 0.18
CHFR-202ENST00000315585 LRRC45Q96CN5 670 aa16.19■□□□□ 0.18
CHFR-202ENST00000315585 HOMER2Q9NSB8 354 aa16.19■□□□□ 0.18
CHFR-202ENST00000315585 APEX2Q9UBZ4 518 aa16.19■□□□□ 0.18
CHFR-202ENST00000315585 DBR1Q9UK59 544 aaKnown RBP16.19■□□□□ 0.18
CHFR-202ENST00000315585 DNAJC12Q9UKB3 198 aa16.19■□□□□ 0.18
CHFR-202ENST00000315585 AFG3L2Q9Y4W6 797 aa16.19■□□□□ 0.18
CHFR-202ENST00000315585 CSADQ9Y600 493 aa16.19■□□□□ 0.18
CHFR-202ENST00000315585 ATP2A1O14983 1001 aa16.18■□□□□ 0.18
CHFR-202ENST00000315585 EVI5O60447 810 aa16.18■□□□□ 0.18
CHFR-202ENST00000315585 SHOX2O60902 331 aaPredicted RBP16.18■□□□□ 0.18
CHFR-202ENST00000315585 PPFIA4O75335 1185 aa16.18■□□□□ 0.18
CHFR-202ENST00000315585 GLI1P08151 1106 aa16.18■□□□□ 0.18
CHFR-202ENST00000315585 NF2P35240 595 aa16.18■□□□□ 0.18
CHFR-202ENST00000315585 KCNA1Q09470 495 aa16.18■□□□□ 0.18
CHFR-202ENST00000315585 BFSP1Q12934 665 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms