RNA–Protein interactions for RNA: ENST00000314992.9

EXD1-201, Transcript of exonuclease 3'-5' domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene EXD1, Length 2,942 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXD1-201ENST00000314992 USP6NLQ92738 828 aa6.69□□□□□ -1.34
EXD1-201ENST00000314992 P3H4Q92791 437 aa6.69□□□□□ -1.34
EXD1-201ENST00000314992 MXD3Q9BW11 206 aa6.69□□□□□ -1.34
EXD1-201ENST00000314992 NT5C3AQ9H0P0 336 aa6.69□□□□□ -1.34
EXD1-201ENST00000314992 GANQ9H2C0 597 aa6.69□□□□□ -1.34
EXD1-201ENST00000314992 MKNK2Q9HBH9 465 aa6.69□□□□□ -1.34
EXD1-201ENST00000314992 BCCIPQ9P287 314 aaKnown RBP eCLIP6.69□□□□□ -1.34
EXD1-201ENST00000314992 SALL4Q9UJQ4 1053 aa6.69□□□□□ -1.34
EXD1-201ENST00000314992 GREB1LQ9C091 1923 aaPredicted RBP6.69□□□□□ -1.34
EXD1-201ENST00000314992 CYP3A7-CYP3A51PA0A087WV96 503 aa6.68□□□□□ -1.34
EXD1-201ENST00000314992 SPDYE2BA6NHP3 402 aa6.68□□□□□ -1.34
EXD1-201ENST00000314992 CCDC188H7C350 402 aa6.68□□□□□ -1.34
EXD1-201ENST00000314992 DNM1LO00429 736 aa6.68□□□□□ -1.34
EXD1-201ENST00000314992 CXCL11O14625 94 aa6.68□□□□□ -1.34
EXD1-201ENST00000314992 LDHBP07195 334 aaKnown RBP6.68□□□□□ -1.34
EXD1-201ENST00000314992 PLEKP08567 350 aaPredicted RBP6.68□□□□□ -1.34
EXD1-201ENST00000314992 SPDYE6P0CI01 402 aa6.68□□□□□ -1.34
EXD1-201ENST00000314992 CYP3A7P24462 503 aa6.68□□□□□ -1.34
EXD1-201ENST00000314992 RTP1P59025 263 aa6.68□□□□□ -1.34
EXD1-201ENST00000314992 TNNC1P63316 161 aa6.68□□□□□ -1.34
EXD1-201ENST00000314992 BIRC3Q13489 604 aa6.68□□□□□ -1.34
EXD1-201ENST00000314992 CALCRLQ16602 461 aa6.68□□□□□ -1.34
EXD1-201ENST00000314992 NFIL3Q16649 462 aa6.68□□□□□ -1.34
EXD1-201ENST00000314992 FAM83BQ5T0W9 1011 aa6.68□□□□□ -1.34
EXD1-201ENST00000314992 NFRKBQ6P4R8 1299 aa6.68□□□□□ -1.34
EXD1-201ENST00000314992 C6orf89Q6UWU4 347 aa6.68□□□□□ -1.34
EXD1-201ENST00000314992 FAM178BQ8IXR5 827 aa6.68□□□□□ -1.34
EXD1-201ENST00000314992 TBCKQ8TEA7 893 aa6.68□□□□□ -1.34
EXD1-201ENST00000314992 RIN2Q8WYP3 895 aaPredicted RBP6.68□□□□□ -1.34
EXD1-201ENST00000314992 PCMTD1Q96MG8 357 aaPredicted RBP6.68□□□□□ -1.34
EXD1-201ENST00000314992 ZIM3Q96PE6 472 aa6.68□□□□□ -1.34
EXD1-201ENST00000314992 DEF6Q9H4E7 631 aa6.68□□□□□ -1.34
EXD1-201ENST00000314992 RBM12Q9NTZ6 932 aaKnown RBP6.68□□□□□ -1.34
EXD1-201ENST00000314992 FZD1Q9UP38 647 aa6.68□□□□□ -1.34
EXD1-201ENST00000314992 TFR2Q9UP52 801 aa6.68□□□□□ -1.34
EXD1-201ENST00000314992 DIS3Q9Y2L1 958 aaKnown RBP6.68□□□□□ -1.34
EXD1-201ENST00000314992 CENPFP49454 3210 aa6.68□□□□□ -1.34
EXD1-201ENST00000314992 COL4A6Q14031 1691 aa6.68□□□□□ -1.34
EXD1-201ENST00000314992 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP6.68□□□□□ -1.34
EXD1-201ENST00000314992 GTPBP10A4D1E9 387 aaKnown RBP6.68□□□□□ -1.34
EXD1-201ENST00000314992 C5orf60A6NFR6 353 aa6.68□□□□□ -1.34
EXD1-201ENST00000314992 ZNF233A6NK53 670 aa6.68□□□□□ -1.34
EXD1-201ENST00000314992 MEFVO15553 781 aaPredicted RBP6.68□□□□□ -1.34
EXD1-201ENST00000314992 ERLIN2O94905 339 aa6.68□□□□□ -1.34
EXD1-201ENST00000314992 NBL1P41271 181 aa6.68□□□□□ -1.34
EXD1-201ENST00000314992 USP11P51784 963 aa6.68□□□□□ -1.34
EXD1-201ENST00000314992 GSCP56915 257 aaPredicted RBP6.68□□□□□ -1.34
EXD1-201ENST00000314992 GNGT1P63211 74 aa6.68□□□□□ -1.34
EXD1-201ENST00000314992 EVX2Q03828 476 aa6.68□□□□□ -1.34
EXD1-201ENST00000314992 PRKG1Q13976 671 aa6.68□□□□□ -1.34
EXD1-201ENST00000314992 CLUL1Q15846 466 aa6.68□□□□□ -1.34
EXD1-201ENST00000314992 PPP2R5EQ16537 467 aa6.68□□□□□ -1.34
EXD1-201ENST00000314992 SPDYE2Q495Y8 402 aa6.68□□□□□ -1.34
EXD1-201ENST00000314992 CFAP58Q5T655 872 aa6.68□□□□□ -1.34
EXD1-201ENST00000314992 FRMD5Q7Z6J6 570 aa6.68□□□□□ -1.34
EXD1-201ENST00000314992 DZIP1Q86YF9 867 aaKnown RBP6.68□□□□□ -1.34
EXD1-201ENST00000314992 BCAS4Q8TDM0 211 aa6.68□□□□□ -1.34
EXD1-201ENST00000314992 ARL8AQ96BM9 186 aa6.68□□□□□ -1.34
EXD1-201ENST00000314992 ATP6V1G3Q96LB4 118 aa6.68□□□□□ -1.34
EXD1-201ENST00000314992 RNPC3Q96LT9 517 aaKnown RBP6.68□□□□□ -1.34
EXD1-201ENST00000314992 KCTD10Q9H3F6 313 aa6.68□□□□□ -1.34
EXD1-201ENST00000314992 TMBIM4Q9HC24 238 aa6.68□□□□□ -1.34
EXD1-201ENST00000314992 LMCD1Q9NZU5 365 aa6.68□□□□□ -1.34
EXD1-201ENST00000314992 SEC63Q9UGP8 760 aaKnown RBP6.68□□□□□ -1.34
EXD1-201ENST00000314992 ZNF236Q9UL36 1845 aa6.68□□□□□ -1.34
EXD1-201ENST00000314992 GBF1Q92538 1859 aa6.68□□□□□ -1.34
EXD1-201ENST00000314992 PES1O00541 588 aaKnown RBP6.67□□□□□ -1.34
EXD1-201ENST00000314992 GLI1P08151 1106 aa6.67□□□□□ -1.34
EXD1-201ENST00000314992 TECP42680 631 aa6.67□□□□□ -1.34
EXD1-201ENST00000314992 CDK8P49336 464 aa6.67□□□□□ -1.34
EXD1-201ENST00000314992 TNFAIP1Q13829 316 aa6.67□□□□□ -1.34
EXD1-201ENST00000314992 TCEAL1Q15170 157 aa6.67□□□□□ -1.34
EXD1-201ENST00000314992 PTGISQ16647 500 aa6.67□□□□□ -1.34
EXD1-201ENST00000314992 BMT2Q1RMZ1 405 aa6.67□□□□□ -1.34
EXD1-201ENST00000314992 LETM2Q2VYF4 491 aa6.67□□□□□ -1.34
EXD1-201ENST00000314992 LEXMQ3ZCV2 418 aa6.67□□□□□ -1.34
EXD1-201ENST00000314992 KRT79Q5XKE5 535 aa6.67□□□□□ -1.34
EXD1-201ENST00000314992 SLF2Q8IX21 1173 aa6.67□□□□□ -1.34
EXD1-201ENST00000314992 MAGEC3Q8TD91 643 aa6.67□□□□□ -1.34
EXD1-201ENST00000314992 SH3RF3Q8TEJ3 882 aaPredicted RBP6.67□□□□□ -1.34
EXD1-201ENST00000314992 BADQ92934 168 aa6.67□□□□□ -1.34
EXD1-201ENST00000314992 CENPTQ96BT3 561 aa6.67□□□□□ -1.34
EXD1-201ENST00000314992 LRRC45Q96CN5 670 aa6.67□□□□□ -1.34
EXD1-201ENST00000314992 RUFY1Q96T51 708 aa6.67□□□□□ -1.34
EXD1-201ENST00000314992 CXorf56Q9H5V9 222 aa6.67□□□□□ -1.34
EXD1-201ENST00000314992 SLITRK6Q9H5Y7 841 aa6.67□□□□□ -1.34
EXD1-201ENST00000314992 MMRN2Q9H8L6 949 aa6.67□□□□□ -1.34
EXD1-201ENST00000314992 SLC39A2Q9NP94 309 aa6.67□□□□□ -1.34
EXD1-201ENST00000314992 SCAF8Q9UPN6 1271 aaKnown RBP6.67□□□□□ -1.34
EXD1-201ENST00000314992 TRAF3IP3Q9Y228 551 aa6.67□□□□□ -1.34
EXD1-201ENST00000314992 CSADQ9Y600 493 aa6.67□□□□□ -1.34
EXD1-201ENST00000314992 NFS1Q9Y697 457 aa6.67□□□□□ -1.34
EXD1-201ENST00000314992 COL11A1P12107 1806 aaPredicted RBP6.67□□□□□ -1.34
EXD1-201ENST00000314992 DCXO43602 365 aa6.67□□□□□ -1.34
EXD1-201ENST00000314992 ZMYND10O75800 440 aa6.67□□□□□ -1.34
EXD1-201ENST00000314992 FAM107AO95990 144 aa6.67□□□□□ -1.34
EXD1-201ENST00000314992 IL1R1P14778 569 aa6.67□□□□□ -1.34
EXD1-201ENST00000314992 LSP1P33241 339 aa6.67□□□□□ -1.34
EXD1-201ENST00000314992 MDH1P40925 334 aaKnown RBP6.67□□□□□ -1.34
EXD1-201ENST00000314992 SLC1A4P43007 532 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms