RNA–Protein interactions for RNA: ENST00000310397.12

SNED1-201, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SNED1, Length 8,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-201ENST00000310397 NBPF20Q3BBV1 942 aa14.04□□□□□ -0.16
SNED1-201ENST00000310397 CEP70Q8NHQ1 597 aa14.04□□□□□ -0.16
SNED1-201ENST00000310397 DTNBP1Q96EV8 351 aa14.04□□□□□ -0.16
SNED1-201ENST00000310397 INO80B-WBP1J3KQ70 363 aa14.04□□□□□ -0.16
SNED1-201ENST00000310397 USPL1Q5W0Q7 1092 aa14.04□□□□□ -0.16
SNED1-201ENST00000310397 TRMT10CQ7L0Y3 403 aaKnown RBP14.04□□□□□ -0.16
SNED1-201ENST00000310397 FAM149B1Q96BN6 582 aa14.04□□□□□ -0.16
SNED1-201ENST00000310397 GCOM2Q9BZD3 368 aaPredicted RBP14.04□□□□□ -0.16
SNED1-201ENST00000310397 INO80BQ9C086 356 aaPredicted RBP14.04□□□□□ -0.16
SNED1-201ENST00000310397 CXorf56Q9H5V9 222 aa14.04□□□□□ -0.16
SNED1-201ENST00000310397 LPXNO60711 386 aa14.04□□□□□ -0.16
SNED1-201ENST00000310397 CDH16O75309 829 aa14.04□□□□□ -0.16
SNED1-201ENST00000310397 TMEM35BQ8NCS4 154 aa14.04□□□□□ -0.16
SNED1-201ENST00000310397 VPS39Q96JC1 886 aa14.04□□□□□ -0.16
SNED1-201ENST00000310397 SLC24A3Q9HC58 644 aa14.04□□□□□ -0.16
SNED1-201ENST00000310397 CFLARO15519 480 aa14.04□□□□□ -0.16
SNED1-201ENST00000310397 FTLP02792 175 aaPredicted RBP14.04□□□□□ -0.16
SNED1-201ENST00000310397 ARFIP2P53365 341 aa14.04□□□□□ -0.16
SNED1-201ENST00000310397 DRAP1Q14919 205 aaPredicted RBP14.04□□□□□ -0.16
SNED1-201ENST00000310397 FAM160B2Q86V87 743 aa14.04□□□□□ -0.16
SNED1-201ENST00000310397 DCAF4Q8WV16 495 aa14.04□□□□□ -0.16
SNED1-201ENST00000310397 USP15Q9Y4E8 981 aaPredicted RBP14.04□□□□□ -0.16
SNED1-201ENST00000310397 PALM3A6NDB9 673 aaPredicted RBP14.04□□□□□ -0.16
SNED1-201ENST00000310397 FAM107AO95990 144 aa14.04□□□□□ -0.16
SNED1-201ENST00000310397 UBE2SQ16763 222 aa14.04□□□□□ -0.16
SNED1-201ENST00000310397 TRIM59Q8IWR1 403 aa14.04□□□□□ -0.16
SNED1-201ENST00000310397 TC2NQ8N9U0 490 aa14.04□□□□□ -0.16
SNED1-201ENST00000310397 MCPH1Q8NEM0 835 aa14.04□□□□□ -0.16
SNED1-201ENST00000310397 OSBPL1AQ9BXW6 950 aa14.04□□□□□ -0.16
SNED1-201ENST00000310397 SNX25Q9H3E2 840 aa14.04□□□□□ -0.16
SNED1-201ENST00000310397 SMYD3Q9H7B4 428 aa14.04□□□□□ -0.16
SNED1-201ENST00000310397 AMACRQ9UHK6 382 aa14.04□□□□□ -0.16
SNED1-201ENST00000310397 POTEMA6NI47 508 aa14.04□□□□□ -0.16
SNED1-201ENST00000310397 IRAK1P51617 712 aa14.04□□□□□ -0.16
SNED1-201ENST00000310397 IGBP1P78318 339 aa14.04□□□□□ -0.16
SNED1-201ENST00000310397 ANLNQ9NQW6 1124 aa14.04□□□□□ -0.16
SNED1-201ENST00000310397 ABCA9Q8IUA7 1624 aa14.04□□□□□ -0.16
SNED1-201ENST00000310397 GSTA4O15217 222 aa14.04□□□□□ -0.16
SNED1-201ENST00000310397 TAC1P20366 129 aa14.04□□□□□ -0.16
SNED1-201ENST00000310397 C3orf20Q8ND61 904 aa14.04□□□□□ -0.16
SNED1-201ENST00000310397 FAM129AQ9BZQ8 928 aa14.04□□□□□ -0.16
SNED1-201ENST00000310397 DCTN4Q9UJW0 460 aa14.04□□□□□ -0.16
SNED1-201ENST00000310397 SLC26A4O43511 780 aa14.03□□□□□ -0.16
SNED1-201ENST00000310397 CCND1P24385 295 aa14.03□□□□□ -0.16
SNED1-201ENST00000310397 GPS1Q13098 491 aa14.03□□□□□ -0.16
SNED1-201ENST00000310397 MORF4L2Q15014 288 aa14.03□□□□□ -0.16
SNED1-201ENST00000310397 SESTD1Q86VW0 696 aa14.03□□□□□ -0.16
SNED1-201ENST00000310397 MYO3AQ8NEV4 1616 aa14.03□□□□□ -0.16
SNED1-201ENST00000310397 TRIM66O15016 1216 aa14.03□□□□□ -0.16
SNED1-201ENST00000310397 PSAPP07602 524 aa14.03□□□□□ -0.16
SNED1-201ENST00000310397 CASP2P42575 452 aa14.03□□□□□ -0.16
SNED1-201ENST00000310397 SERPINB4P48594 390 aa14.03□□□□□ -0.16
SNED1-201ENST00000310397 JAK3P52333 1124 aa14.03□□□□□ -0.16
SNED1-201ENST00000310397 OCA2Q04671 838 aa14.03□□□□□ -0.16
SNED1-201ENST00000310397 SPATA21Q7Z572 469 aa14.03□□□□□ -0.16
SNED1-201ENST00000310397 OXER1Q8TDS5 423 aa14.03□□□□□ -0.16
SNED1-201ENST00000310397 SPC25Q9HBM1 224 aa14.03□□□□□ -0.16
SNED1-201ENST00000310397 NCK2O43639 380 aa14.03□□□□□ -0.16
SNED1-201ENST00000310397 SOX5P35711 763 aa14.03□□□□□ -0.16
SNED1-201ENST00000310397 FAM98CQ17RN3 349 aaKnown RBP14.03□□□□□ -0.16
SNED1-201ENST00000310397 RHOT1Q8IXI2 618 aa14.03□□□□□ -0.16
SNED1-201ENST00000310397 GIPC2Q8TF65 315 aa14.03□□□□□ -0.16
SNED1-201ENST00000310397 ALKBH8Q96BT7 664 aaKnown RBP14.03□□□□□ -0.16
SNED1-201ENST00000310397 TAP1Q03518 808 aa14.03□□□□□ -0.16
SNED1-201ENST00000310397 FBXW10Q5XX13 1052 aa14.03□□□□□ -0.16
SNED1-201ENST00000310397 CC2D2BQ6DHV5 1058 aa14.03□□□□□ -0.16
SNED1-201ENST00000310397 PDXDC1Q6P996 788 aa14.03□□□□□ -0.16
SNED1-201ENST00000310397 AGGF1Q8N302 714 aaeCLIP14.03□□□□□ -0.16
SNED1-201ENST00000310397 EPHA10Q5JZY3 1008 aa14.03□□□□□ -0.16
SNED1-201ENST00000310397 C16orf87Q6PH81 154 aa14.03□□□□□ -0.16
SNED1-201ENST00000310397 IRX2Q9BZI1 471 aaPredicted RBP14.03□□□□□ -0.16
SNED1-201ENST00000310397 FOXP3Q9BZS1 431 aa14.03□□□□□ -0.16
SNED1-201ENST00000310397 NXF1Q9UBU9 619 aaKnown RBP14.03□□□□□ -0.16
SNED1-201ENST00000310397 ANGPTL3Q9Y5C1 460 aa14.03□□□□□ -0.16
SNED1-201ENST00000310397 ARL13BQ3SXY8 428 aa14.03□□□□□ -0.16
SNED1-201ENST00000310397 ATP6V1E2Q96A05 226 aa14.03□□□□□ -0.16
SNED1-201ENST00000310397 USP32Q8NFA0 1604 aa14.03□□□□□ -0.16
SNED1-201ENST00000310397 LMTK3Q96Q04 1460 aa14.02□□□□□ -0.16
SNED1-201ENST00000310397 COPS2P61201 443 aa14.02□□□□□ -0.16
SNED1-201ENST00000310397 GRM4Q14833 912 aa14.02□□□□□ -0.16
SNED1-201ENST00000310397 TRPM8Q7Z2W7 1104 aa14.02□□□□□ -0.16
SNED1-201ENST00000310397 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.02□□□□□ -0.164e-6■■■■■ 48.1
SNED1-201ENST00000310397 DDX56Q9NY93 547 aaKnown RBP14.02□□□□□ -0.16
SNED1-201ENST00000310397 IP6K2Q9UHH9 426 aa14.02□□□□□ -0.16
SNED1-201ENST00000310397 A0A1W2PQJ5 194 aa14.02□□□□□ -0.16
SNED1-201ENST00000310397 PPP1R12AO14974 1030 aaPredicted RBP14.02□□□□□ -0.16
SNED1-201ENST00000310397 ELF1P32519 619 aa14.02□□□□□ -0.16
SNED1-201ENST00000310397 VAMP7P51809 220 aa14.02□□□□□ -0.16
SNED1-201ENST00000310397 PDIA5Q14554 519 aa14.02□□□□□ -0.16
SNED1-201ENST00000310397 CLEC4GQ6UXB4 293 aa14.02□□□□□ -0.16
SNED1-201ENST00000310397 MCUQ8NE86 351 aa14.02□□□□□ -0.16
SNED1-201ENST00000310397 SEC16BQ96JE7 1060 aa14.02□□□□□ -0.16
SNED1-201ENST00000310397 PRMT1Q99873 361 aaKnown RBP14.02□□□□□ -0.16
SNED1-201ENST00000310397 LRRC4Q9HBW1 653 aa14.02□□□□□ -0.16
SNED1-201ENST00000310397 DPYDQ12882 1025 aa14.02□□□□□ -0.16
SNED1-201ENST00000310397 DACT3Q96B18 629 aaPredicted RBP14.02□□□□□ -0.16
SNED1-201ENST00000310397 ZNF189O75820 626 aaPredicted RBP14.02□□□□□ -0.17
SNED1-201ENST00000310397 DYNLL2Q96FJ2 89 aa14.02□□□□□ -0.17
SNED1-201ENST00000310397 RPS6KC1Q96S38 1066 aa14.02□□□□□ -0.17
SNED1-201ENST00000310397 TRIM9Q9C026 710 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms