RNA–Protein interactions for RNA: ENST00000309279.11

CHD6-201, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best) BASIC

Gene CHD6, Length 1,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-201ENST00000309279 TOMM20Q15388 145 aa9.14□□□□□ -0.95
CHD6-201ENST00000309279 KIAA0753Q2KHM9 967 aa9.14□□□□□ -0.95
CHD6-201ENST00000309279 UTP14CQ5TAP6 766 aaKnown RBP9.14□□□□□ -0.95
CHD6-201ENST00000309279 SWSAP1Q6NVH7 229 aa9.14□□□□□ -0.95
CHD6-201ENST00000309279 DTHD1Q6ZMT9 781 aa9.14□□□□□ -0.95
CHD6-201ENST00000309279 ANKRD33Q7Z3H0 272 aa9.14□□□□□ -0.95
CHD6-201ENST00000309279 MIER3Q7Z3K6 550 aa9.14□□□□□ -0.95
CHD6-201ENST00000309279 SESTD1Q86VW0 696 aa9.14□□□□□ -0.95
CHD6-201ENST00000309279 TRIM50Q86XT4 487 aa9.14□□□□□ -0.95
CHD6-201ENST00000309279 GLG1Q92896 1179 aa9.14□□□□□ -0.95
CHD6-201ENST00000309279 ZNF396Q96N95 335 aaPredicted RBP9.14□□□□□ -0.95
CHD6-201ENST00000309279 TOX2Q96NM4 488 aa9.14□□□□□ -0.95
CHD6-201ENST00000309279 HSD17B14Q9BPX1 270 aa9.14□□□□□ -0.95
CHD6-201ENST00000309279 FTOQ9C0B1 505 aaKnown RBP eCLIP9.14□□□□□ -0.95
CHD6-201ENST00000309279 DNAJC25Q9H1X3 360 aa9.14□□□□□ -0.95
CHD6-201ENST00000309279 RNPEPQ9H4A4 650 aa9.14□□□□□ -0.95
CHD6-201ENST00000309279 AZI2Q9H6S1 392 aa9.14□□□□□ -0.95
CHD6-201ENST00000309279 PTPRHQ9HD43 1115 aa9.14□□□□□ -0.95
CHD6-201ENST00000309279 ZNF302Q9NR11 478 aa9.14□□□□□ -0.95
CHD6-201ENST00000309279 ATP6V1DQ9Y5K8 247 aa9.14□□□□□ -0.95
CHD6-201ENST00000309279 TRIP12Q14669 1992 aaPredicted RBP9.14□□□□□ -0.95
CHD6-201ENST00000309279 IGSF9BQ9UPX0 1349 aa9.14□□□□□ -0.95
CHD6-201ENST00000309279 CHMP2AO43633 222 aa9.13□□□□□ -0.95
CHD6-201ENST00000309279 MYL1P05976 194 aa9.13□□□□□ -0.95
CHD6-201ENST00000309279 P4HBP07237 508 aaKnown RBP9.13□□□□□ -0.95
CHD6-201ENST00000309279 NDUFV2P19404 249 aa9.13□□□□□ -0.95
CHD6-201ENST00000309279 HOXC8P31273 242 aa9.13□□□□□ -0.95
CHD6-201ENST00000309279 PSEN2P49810 448 aa9.13□□□□□ -0.95
CHD6-201ENST00000309279 PSMC6P62333 389 aa9.13□□□□□ -0.95
CHD6-201ENST00000309279 PTPN11Q06124 597 aaPredicted RBP9.13□□□□□ -0.95
CHD6-201ENST00000309279 PPP2R5AQ15172 486 aa9.13□□□□□ -0.95
CHD6-201ENST00000309279 TMEM266Q2M3C6 531 aa9.13□□□□□ -0.95
CHD6-201ENST00000309279 ACBD5Q5T8D3 534 aaPredicted RBP9.13□□□□□ -0.95
CHD6-201ENST00000309279 FAM160B1Q5W0V3 765 aa9.13□□□□□ -0.95
CHD6-201ENST00000309279 TMEM87AQ8NBN3 555 aa9.13□□□□□ -0.95
CHD6-201ENST00000309279 LINC00301Q8NCQ3 95 aa9.13□□□□□ -0.95
CHD6-201ENST00000309279 HELQQ8TDG4 1101 aa9.13□□□□□ -0.95
CHD6-201ENST00000309279 ZNF700Q9H0M5 742 aa9.13□□□□□ -0.95
CHD6-201ENST00000309279 ALG2Q9H553 416 aa9.13□□□□□ -0.95
CHD6-201ENST00000309279 KMT5AQ9NQR1 393 aa9.13□□□□□ -0.95
CHD6-201ENST00000309279 CFAP45Q9UL16 551 aa9.13□□□□□ -0.95
CHD6-201ENST00000309279 MROH7Q68CQ1 1323 aa9.13□□□□□ -0.95
CHD6-201ENST00000309279 GRXCR2A6NFK2 248 aa9.13□□□□□ -0.95
CHD6-201ENST00000309279 POTEMA6NI47 508 aa9.13□□□□□ -0.95
CHD6-201ENST00000309279 BACH1O14867 736 aa9.13□□□□□ -0.95
CHD6-201ENST00000309279 TSPAN6O43657 245 aa9.13□□□□□ -0.95
CHD6-201ENST00000309279 ZNF862O60290 1169 aa9.13□□□□□ -0.95
CHD6-201ENST00000309279 SLITRK3O94933 977 aa9.13□□□□□ -0.95
CHD6-201ENST00000309279 STBD1O95210 358 aa9.13□□□□□ -0.95
CHD6-201ENST00000309279 YEATS4O95619 227 aa9.13□□□□□ -0.95
CHD6-201ENST00000309279 QARSP47897 775 aaKnown RBP9.13□□□□□ -0.95
CHD6-201ENST00000309279 ATN1P54259 1190 aaPredicted RBP9.13□□□□□ -0.95
CHD6-201ENST00000309279 PSMC5P62195 406 aa9.13□□□□□ -0.95
CHD6-201ENST00000309279 ADAM17P78536 824 aa9.13□□□□□ -0.95
CHD6-201ENST00000309279 ARID5AQ03989 594 aa9.13□□□□□ -0.95
CHD6-201ENST00000309279 DNM1Q05193 864 aaKnown RBP9.13□□□□□ -0.95
CHD6-201ENST00000309279 PLCB4Q15147 1175 aa9.13□□□□□ -0.95
CHD6-201ENST00000309279 LRRC26Q2I0M4 334 aa9.13□□□□□ -0.95
CHD6-201ENST00000309279 NCAPH2Q6IBW4 605 aa9.13□□□□□ -0.95
CHD6-201ENST00000309279 PDXDC2PQ6P474 469 aa9.13□□□□□ -0.95
CHD6-201ENST00000309279 C16orf87Q6PH81 154 aa9.13□□□□□ -0.95
CHD6-201ENST00000309279 NEK9Q8TD19 979 aa9.13□□□□□ -0.95
CHD6-201ENST00000309279 ATP8B4Q8TF62 1192 aa9.13□□□□□ -0.95
CHD6-201ENST00000309279 TNPO1Q92973 898 aaKnown RBP9.13□□□□□ -0.95
CHD6-201ENST00000309279 ATP6V0A1Q93050 837 aa9.13□□□□□ -0.95
CHD6-201ENST00000309279 ASB16Q96NS5 453 aa9.13□□□□□ -0.95
CHD6-201ENST00000309279 EIF2AK1Q9BQI3 630 aaKnown RBP9.13□□□□□ -0.95
CHD6-201ENST00000309279 RAB34Q9BZG1 259 aa9.13□□□□□ -0.95
CHD6-201ENST00000309279 HDAC6Q9UBN7 1215 aa9.13□□□□□ -0.95
CHD6-201ENST00000309279 SUN2Q9UH99 717 aa9.13□□□□□ -0.95
CHD6-201ENST00000309279 GTF2IRD1Q9UHL9 959 aa9.13□□□□□ -0.95
CHD6-201ENST00000309279 EVLQ9UI08 416 aaPredicted RBP9.13□□□□□ -0.95
CHD6-201ENST00000309279 SRPRBQ9Y5M8 271 aaKnown RBP9.13□□□□□ -0.95
CHD6-201ENST00000309279 NRCAMQ92823 1304 aa9.12□□□□□ -0.95
CHD6-201ENST00000309279 POTEB3A0JP26 581 aa9.12□□□□□ -0.95
CHD6-201ENST00000309279 VWA3AA6NCI4 1184 aa9.12□□□□□ -0.95
CHD6-201ENST00000309279 KIF1CO43896 1103 aaKnown RBP9.12□□□□□ -0.95
CHD6-201ENST00000309279 HBP1O60381 514 aa9.12□□□□□ -0.95
CHD6-201ENST00000309279 DKC1O60832 514 aaKnown RBP eCLIP9.12□□□□□ -0.95
CHD6-201ENST00000309279 PPP6R2O75170 966 aa9.12□□□□□ -0.95
CHD6-201ENST00000309279 LYPLA2O95372 231 aa9.12□□□□□ -0.95
CHD6-201ENST00000309279 CD4P01730 458 aa9.12□□□□□ -0.95
CHD6-201ENST00000309279 SPATA31C1P0DKV0 1188 aa9.12□□□□□ -0.95
CHD6-201ENST00000309279 MUTP22033 750 aa9.12□□□□□ -0.95
CHD6-201ENST00000309279 RPA1P27694 616 aa9.12□□□□□ -0.95
CHD6-201ENST00000309279 PIK3CAP42336 1068 aa9.12□□□□□ -0.95
CHD6-201ENST00000309279 CEBPZQ03701 1054 aaKnown RBP9.12□□□□□ -0.95
CHD6-201ENST00000309279 NFE2Q16621 373 aaPredicted RBP9.12□□□□□ -0.95
CHD6-201ENST00000309279 UGCGQ16739 394 aa9.12□□□□□ -0.95
CHD6-201ENST00000309279 POTEBQ6S5H4 581 aa9.12□□□□□ -0.95
CHD6-201ENST00000309279 FAM126BQ8IXS8 530 aa9.12□□□□□ -0.95
CHD6-201ENST00000309279 C4orf19Q8IY42 314 aa9.12□□□□□ -0.95
CHD6-201ENST00000309279 C7orf31Q8N865 590 aa9.12□□□□□ -0.95
CHD6-201ENST00000309279 ATRIPQ8WXE1 791 aa9.12□□□□□ -0.95
CHD6-201ENST00000309279 AK8Q96MA6 479 aa9.12□□□□□ -0.95
CHD6-201ENST00000309279 POLR3CQ9BUI4 534 aaPredicted RBP9.12□□□□□ -0.95
CHD6-201ENST00000309279 HTATIP2Q9BUP3 242 aa9.12□□□□□ -0.95
CHD6-201ENST00000309279 CCDC94Q9BW85 323 aaPredicted RBP9.12□□□□□ -0.95
CHD6-201ENST00000309279 NIFKQ9BYG3 293 aaKnown RBP9.12□□□□□ -0.95
CHD6-201ENST00000309279 RGL1Q9NZL6 768 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms