RNA–Protein interactions for RNA: ENST00000309263.7

SCUBE2-201, Transcript of signal peptide, CUB domain and EGF like domain containing 2, humanhuman

TSL 5 BASIC

Gene SCUBE2, Length 3,727 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE2-201ENST00000309263 SUCLA2Q9P2R7 463 aaPredicted RBP15.54■□□□□ 0.08
SCUBE2-201ENST00000309263 COL4A1P02462 1669 aa15.54■□□□□ 0.08
SCUBE2-201ENST00000309263 MYH7BA7E2Y1 1941 aa15.54■□□□□ 0.08
SCUBE2-201ENST00000309263 GSTTP1A0A1W2PQM5 241 aa15.54■□□□□ 0.08
SCUBE2-201ENST00000309263 IGF2BP3O00425 579 aaKnown RBP eCLIP15.54■□□□□ 0.08
SCUBE2-201ENST00000309263 APBA3O96018 575 aa15.54■□□□□ 0.08
SCUBE2-201ENST00000309263 HOXA13P31271 388 aaPredicted RBP15.54■□□□□ 0.08
SCUBE2-201ENST00000309263 UBXN2AP68543 259 aa15.54■□□□□ 0.08
SCUBE2-201ENST00000309263 C10orf76Q5T2E6 689 aa15.54■□□□□ 0.08
SCUBE2-201ENST00000309263 ZNF804AQ7Z570 1209 aa15.54■□□□□ 0.08
SCUBE2-201ENST00000309263 ALG3Q92685 438 aa15.54■□□□□ 0.08
SCUBE2-201ENST00000309263 KRT35Q92764 455 aa15.54■□□□□ 0.08
SCUBE2-201ENST00000309263 ASIC3Q9UHC3 531 aa15.54■□□□□ 0.08
SCUBE2-201ENST00000309263 PSEN1P49768 467 aa15.54■□□□□ 0.08
SCUBE2-201ENST00000309263 EIF3BP55884 814 aaKnown RBP15.54■□□□□ 0.08
SCUBE2-201ENST00000309263 TCP10Q12799 353 aa15.54■□□□□ 0.08
SCUBE2-201ENST00000309263 CTTNQ14247 550 aaKnown RBP15.54■□□□□ 0.08
SCUBE2-201ENST00000309263 COBLL1Q53SF7 1204 aa15.54■□□□□ 0.08
SCUBE2-201ENST00000309263 ARSHQ5FYA8 562 aa15.54■□□□□ 0.08
SCUBE2-201ENST00000309263 ZFYVE27Q5T4F4 411 aa15.54■□□□□ 0.08
SCUBE2-201ENST00000309263 CAPN12Q6ZSI9 719 aa15.54■□□□□ 0.08
SCUBE2-201ENST00000309263 LNX1Q8TBB1 728 aaPredicted RBP15.54■□□□□ 0.08
SCUBE2-201ENST00000309263 AGAP11Q8TF27 550 aa15.54■□□□□ 0.08
SCUBE2-201ENST00000309263 ELMO3Q96BJ8 720 aa15.54■□□□□ 0.08
SCUBE2-201ENST00000309263 A1CFQ9NQ94 594 aaKnown RBP15.54■□□□□ 0.08
SCUBE2-201ENST00000309263 SCAF8Q9UPN6 1271 aaKnown RBP15.54■□□□□ 0.08
SCUBE2-201ENST00000309263 AGAP1Q9UPQ3 857 aa15.54■□□□□ 0.08
SCUBE2-201ENST00000309263 EDIL3O43854 480 aa15.53■□□□□ 0.08
SCUBE2-201ENST00000309263 SPICE1Q8N0Z3 855 aa15.53■□□□□ 0.08
SCUBE2-201ENST00000309263 PAGR1Q9BTK6 254 aa15.53■□□□□ 0.08
SCUBE2-201ENST00000309263 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.53■□□□□ 0.08
SCUBE2-201ENST00000309263 PKD2L1Q9P0L9 805 aa15.53■□□□□ 0.08
SCUBE2-201ENST00000309263 ZBTB39O15060 712 aa15.53■□□□□ 0.08
SCUBE2-201ENST00000309263 KIF1CO43896 1103 aaKnown RBP15.53■□□□□ 0.08
SCUBE2-201ENST00000309263 PPP1R11O60927 126 aaPredicted RBP15.53■□□□□ 0.08
SCUBE2-201ENST00000309263 GJC1P36383 396 aa15.53■□□□□ 0.08
SCUBE2-201ENST00000309263 CALCOCO2Q13137 446 aa15.53■□□□□ 0.08
SCUBE2-201ENST00000309263 XRCC4Q13426 336 aa15.53■□□□□ 0.08
SCUBE2-201ENST00000309263 LRCH2Q5VUJ6 765 aa15.53■□□□□ 0.08
SCUBE2-201ENST00000309263 CCDC137Q6PK04 289 aaKnown RBP15.53■□□□□ 0.08
SCUBE2-201ENST00000309263 ZNF622Q969S3 477 aaKnown RBP eCLIP15.53■□□□□ 0.08
SCUBE2-201ENST00000309263 PCIF1Q9H4Z3 704 aa15.53■□□□□ 0.08
SCUBE2-201ENST00000309263 CTNNAL1Q9UBT7 734 aa15.53■□□□□ 0.08
SCUBE2-201ENST00000309263 PNMA6FA0A0J9YX94 578 aa15.53■□□□□ 0.08
SCUBE2-201ENST00000309263 FERP16591 822 aa15.53■□□□□ 0.08
SCUBE2-201ENST00000309263 SCNN1DP51172 638 aa15.53■□□□□ 0.08
SCUBE2-201ENST00000309263 CACNB3P54284 484 aa15.53■□□□□ 0.08
SCUBE2-201ENST00000309263 DCAF12L1Q5VU92 463 aa15.53■□□□□ 0.08
SCUBE2-201ENST00000309263 SLC17A8Q8NDX2 589 aa15.53■□□□□ 0.08
SCUBE2-201ENST00000309263 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.53■□□□□ 0.08
SCUBE2-201ENST00000309263 RFFLQ8WZ73 363 aa15.53■□□□□ 0.08
SCUBE2-201ENST00000309263 FAM118BQ9BPY3 351 aa15.53■□□□□ 0.08
SCUBE2-201ENST00000309263 DDX23Q9BUQ8 820 aaKnown RBP15.53■□□□□ 0.08
SCUBE2-201ENST00000309263 KDM4CQ9H3R0 1056 aa15.53■□□□□ 0.08
SCUBE2-201ENST00000309263 ACP6Q9NPH0 428 aa15.53■□□□□ 0.08
SCUBE2-201ENST00000309263 MTMR4Q9NYA4 1195 aa15.53■□□□□ 0.08
SCUBE2-201ENST00000309263 PNMA3Q9UL41 463 aa15.53■□□□□ 0.08
SCUBE2-201ENST00000309263 MYH1P12882 1939 aa15.52■□□□□ 0.08
SCUBE2-201ENST00000309263 MYH4Q9Y623 1939 aa15.52■□□□□ 0.08
SCUBE2-201ENST00000309263 ENO4A6NNW6 628 aa15.52■□□□□ 0.08
SCUBE2-201ENST00000309263 RPL21P46778 160 aaKnown RBP15.52■□□□□ 0.08
SCUBE2-201ENST00000309263 C16orf86Q6ZW13 317 aa15.52■□□□□ 0.08
SCUBE2-201ENST00000309263 NAP1L3Q99457 506 aaPredicted RBP15.52■□□□□ 0.08
SCUBE2-201ENST00000309263 USP40Q9NVE5 1235 aa15.52■□□□□ 0.08
SCUBE2-201ENST00000309263 ALG6Q9Y672 507 aa15.52■□□□□ 0.08
SCUBE2-201ENST00000309263 ERMNQ8TAM6 284 aa15.52■□□□□ 0.07
SCUBE2-201ENST00000309263 ARHGEF2Q92974 986 aaKnown RBP15.52■□□□□ 0.07
SCUBE2-201ENST00000309263 SLC35C1Q96A29 364 aa15.52■□□□□ 0.07
SCUBE2-201ENST00000309263 HOOK2Q96ED9 719 aa15.52■□□□□ 0.07
SCUBE2-201ENST00000309263 RUSC1Q9BVN2 902 aa15.52■□□□□ 0.07
SCUBE2-201ENST00000309263 SSR1P43307 286 aaKnown RBP15.52■□□□□ 0.07
SCUBE2-201ENST00000309263 SEL1L2Q5TEA6 688 aa15.52■□□□□ 0.07
SCUBE2-201ENST00000309263 CPNE8Q86YQ8 564 aa15.52■□□□□ 0.07
SCUBE2-201ENST00000309263 CYP2W1Q8TAV3 490 aa15.52■□□□□ 0.07
SCUBE2-201ENST00000309263 ATP8B4Q8TF62 1192 aa15.52■□□□□ 0.07
SCUBE2-201ENST00000309263 C1orf54Q8WWF1 131 aa15.52■□□□□ 0.07
SCUBE2-201ENST00000309263 TAOK3Q9H2K8 898 aa15.52■□□□□ 0.07
SCUBE2-201ENST00000309263 CACNA1SQ13698 1873 aa15.52■□□□□ 0.07
SCUBE2-201ENST00000309263 EXOC3O60645 756 aa15.51■□□□□ 0.07
SCUBE2-201ENST00000309263 ALDH5A1P51649 535 aaPredicted RBP15.51■□□□□ 0.07
SCUBE2-201ENST00000309263 GTF2IP78347 998 aa15.51■□□□□ 0.07
SCUBE2-201ENST00000309263 GIT2Q14161 759 aa15.51■□□□□ 0.07
SCUBE2-201ENST00000309263 WLSQ5T9L3 541 aa15.51■□□□□ 0.07
SCUBE2-201ENST00000309263 SLC20A1Q8WUM9 679 aa15.51■□□□□ 0.07
SCUBE2-201ENST00000309263 RPGRQ92834 1020 aaKnown RBP15.51■□□□□ 0.07
SCUBE2-201ENST00000309263 ANO3Q9BYT9 981 aa15.51■□□□□ 0.07
SCUBE2-201ENST00000309263 RIOX1Q9H6W3 641 aa15.51■□□□□ 0.07
SCUBE2-201ENST00000309263 GGA2Q9UJY4 613 aa15.51■□□□□ 0.07
SCUBE2-201ENST00000309263 EP400Q96L91 3159 aa15.51■□□□□ 0.07
SCUBE2-201ENST00000309263 BCORQ6W2J9 1755 aa15.51■□□□□ 0.07
SCUBE2-201ENST00000309263 H0Y3Z8 333 aa15.51■□□□□ 0.07
SCUBE2-201ENST00000309263 PPIP5K2O43314 1243 aa15.51■□□□□ 0.07
SCUBE2-201ENST00000309263 MAPK7Q13164 816 aa15.51■□□□□ 0.07
SCUBE2-201ENST00000309263 EPHA7Q15375 998 aa15.51■□□□□ 0.07
SCUBE2-201ENST00000309263 HP1BP3Q5SSJ5 553 aaPredicted RBP15.51■□□□□ 0.07
SCUBE2-201ENST00000309263 EMC10Q5UCC4 262 aa15.51■□□□□ 0.07
SCUBE2-201ENST00000309263 TAOK1Q7L7X3 1001 aa15.51■□□□□ 0.07
SCUBE2-201ENST00000309263 FRMD5Q7Z6J6 570 aa15.51■□□□□ 0.07
SCUBE2-201ENST00000309263 SH2D3AQ9BRG2 576 aa15.51■□□□□ 0.07
SCUBE2-201ENST00000309263 TCRBV7S2A1N4TA0A589 114 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms