RNA–Protein interactions for RNA: ENST00000309246.9

TPT1-201, Transcript of tumor protein, translationally-controlled 1, humanhuman

TSL 1 (best) BASIC

Gene TPT1, Length 1,008 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPT1-201ENST00000309246 ATF7P17544 494 aaPredicted RBP13.73□□□□□ -0.21
TPT1-201ENST00000309246 PDIA3P30101 505 aaKnown RBP13.73□□□□□ -0.21
TPT1-201ENST00000309246 SFNP31947 248 aa13.73□□□□□ -0.21
TPT1-201ENST00000309246 PPM1AP35813 382 aa13.73□□□□□ -0.21
TPT1-201ENST00000309246 USP11P51784 963 aa13.73□□□□□ -0.21
TPT1-201ENST00000309246 JAK3P52333 1124 aa13.73□□□□□ -0.21
TPT1-201ENST00000309246 DRP2Q13474 957 aa13.73□□□□□ -0.21
TPT1-201ENST00000309246 KCNC3Q14003 757 aa13.73□□□□□ -0.21
TPT1-201ENST00000309246 MTERF2Q49AM1 385 aa13.73□□□□□ -0.21
TPT1-201ENST00000309246 ANKRD54Q6NXT1 300 aa13.73□□□□□ -0.21
TPT1-201ENST00000309246 MIER3Q7Z3K6 550 aa13.73□□□□□ -0.21
TPT1-201ENST00000309246 HELQQ8TDG4 1101 aa13.73□□□□□ -0.21
TPT1-201ENST00000309246 TBCKQ8TEA7 893 aa13.73□□□□□ -0.21
TPT1-201ENST00000309246 NLRP7Q8WX94 980 aa13.73□□□□□ -0.21
TPT1-201ENST00000309246 PBXIP1Q96AQ6 731 aa13.73□□□□□ -0.21
TPT1-201ENST00000309246 RNF25Q96BH1 459 aaPredicted RBP13.73□□□□□ -0.21
TPT1-201ENST00000309246 S1PR5Q9H228 398 aa13.73□□□□□ -0.21
TPT1-201ENST00000309246 RTN4Q9NQC3 1192 aaKnown RBP13.73□□□□□ -0.21
TPT1-201ENST00000309246 SPG21Q9NZD8 308 aa13.73□□□□□ -0.21
TPT1-201ENST00000309246 SEPT9Q9UHD8 586 aaPredicted RBP13.73□□□□□ -0.21
TPT1-201ENST00000309246 PSMD10O75832 226 aa13.72□□□□□ -0.21
TPT1-201ENST00000309246 TDP2O95551 362 aa13.72□□□□□ -0.21
TPT1-201ENST00000309246 SP100P23497 879 aaPredicted RBP13.72□□□□□ -0.21
TPT1-201ENST00000309246 PSMA5P28066 241 aa13.72□□□□□ -0.21
TPT1-201ENST00000309246 KRT17Q04695 432 aa13.72□□□□□ -0.21
TPT1-201ENST00000309246 TARBP2Q15633 366 aaKnown RBP13.72□□□□□ -0.21
TPT1-201ENST00000309246 SYCE2Q6PIF2 218 aa13.72□□□□□ -0.21
TPT1-201ENST00000309246 TMEM184AQ6ZMB5 413 aa13.72□□□□□ -0.21
TPT1-201ENST00000309246 TMC7Q7Z402 723 aa13.72□□□□□ -0.21
TPT1-201ENST00000309246 BMP8AQ7Z5Y6 402 aa13.72□□□□□ -0.21
TPT1-201ENST00000309246 ZNF598Q86UK7 904 aaKnown RBP13.72□□□□□ -0.21
TPT1-201ENST00000309246 SLC39A11Q8N1S5 342 aa13.72□□□□□ -0.21
TPT1-201ENST00000309246 ZNF710Q8N1W2 664 aa13.72□□□□□ -0.21
TPT1-201ENST00000309246 SH2D3AQ9BRG2 576 aa13.72□□□□□ -0.21
TPT1-201ENST00000309246 NGRNQ9NPE2 291 aaKnown RBP13.72□□□□□ -0.21
TPT1-201ENST00000309246 SH3GLB2Q9NR46 395 aa13.72□□□□□ -0.21
TPT1-201ENST00000309246 CDH22Q9UJ99 828 aa13.72□□□□□ -0.21
TPT1-201ENST00000309246 A0A0U1RQF3 1178 aa13.71□□□□□ -0.21
TPT1-201ENST00000309246 NT5C1B-RDH14C9J2C7 533 aa13.71□□□□□ -0.21
TPT1-201ENST00000309246 CA8P35219 290 aa13.71□□□□□ -0.21
TPT1-201ENST00000309246 PSEN1P49768 467 aa13.71□□□□□ -0.21
TPT1-201ENST00000309246 EVCP57679 992 aa13.71□□□□□ -0.21
TPT1-201ENST00000309246 TOB2Q14106 344 aaPredicted RBP13.71□□□□□ -0.21
TPT1-201ENST00000309246 TRIM22Q8IYM9 498 aa13.71□□□□□ -0.21
TPT1-201ENST00000309246 PRSS33Q8NF86 280 aa13.71□□□□□ -0.21
TPT1-201ENST00000309246 BMP2KQ9NSY1 1161 aaPredicted RBP13.71□□□□□ -0.21
TPT1-201ENST00000309246 DACT1Q9NYF0 836 aa13.71□□□□□ -0.21
TPT1-201ENST00000309246 PCDHA4Q9UN74 947 aa13.71□□□□□ -0.21
TPT1-201ENST00000309246 DENND4AQ7Z401 1863 aa13.71□□□□□ -0.21
TPT1-201ENST00000309246 A0A087WZ62 844 aa13.7□□□□□ -0.22
TPT1-201ENST00000309246 REC8O95072 547 aa13.7□□□□□ -0.22
TPT1-201ENST00000309246 STBD1O95210 358 aa13.7□□□□□ -0.22
TPT1-201ENST00000309246 EOMESO95936 686 aa13.7□□□□□ -0.22
TPT1-201ENST00000309246 SSRP1Q08945 709 aaKnown RBP13.7□□□□□ -0.22
TPT1-201ENST00000309246 SIGLEC14Q08ET2 396 aa13.7□□□□□ -0.22
TPT1-201ENST00000309246 SMC1AQ14683 1233 aaKnown RBP13.7□□□□□ -0.22
TPT1-201ENST00000309246 LONRF3Q496Y0 759 aa13.7□□□□□ -0.22
TPT1-201ENST00000309246 Q4G0T1 1027 aa13.7□□□□□ -0.22
TPT1-201ENST00000309246 XKR3Q5GH77 459 aa13.7□□□□□ -0.22
TPT1-201ENST00000309246 IER5LQ5T953 404 aa13.7□□□□□ -0.22
TPT1-201ENST00000309246 ASTLQ6HA08 431 aaPredicted RBP13.7□□□□□ -0.22
TPT1-201ENST00000309246 SUGP1Q8IWZ8 645 aaKnown RBP13.7□□□□□ -0.22
TPT1-201ENST00000309246 BLIDQ8IZY5 108 aa13.7□□□□□ -0.22
TPT1-201ENST00000309246 RDM1Q8NG50 284 aa13.7□□□□□ -0.22
TPT1-201ENST00000309246 LPPQ93052 612 aa13.7□□□□□ -0.22
TPT1-201ENST00000309246 AIFM3Q96NN9 605 aa13.7□□□□□ -0.22
TPT1-201ENST00000309246 CEP89Q96ST8 783 aa13.7□□□□□ -0.22
TPT1-201ENST00000309246 FDXACB1Q9BRP7 624 aaPredicted RBP13.7□□□□□ -0.22
TPT1-201ENST00000309246 LARP6Q9BRS8 491 aaKnown RBP13.7□□□□□ -0.22
TPT1-201ENST00000309246 MRPL9Q9BYD2 267 aaKnown RBP13.7□□□□□ -0.22
TPT1-201ENST00000309246 NIFKQ9BYG3 293 aaKnown RBP13.7□□□□□ -0.22
TPT1-201ENST00000309246 GCOM2Q9BZD3 368 aaPredicted RBP13.7□□□□□ -0.22
TPT1-201ENST00000309246 C22orf23Q9BZE7 217 aa13.7□□□□□ -0.22
TPT1-201ENST00000309246 HCFC2Q9Y5Z7 792 aa13.7□□□□□ -0.22
TPT1-201ENST00000309246 PIEZO1Q92508 2521 aa13.7□□□□□ -0.22
TPT1-201ENST00000309246 C2orf16Q68DN1 1984 aa13.7□□□□□ -0.22
TPT1-201ENST00000309246 IGKV6-21A0A0C4DH24 114 aa13.69□□□□□ -0.22
TPT1-201ENST00000309246 C2orf71A6NGG8 1288 aa13.69□□□□□ -0.22
TPT1-201ENST00000309246 ZC3H11AO75152 810 aaKnown RBP eCLIP13.69□□□□□ -0.22
TPT1-201ENST00000309246 HOXB8P17481 243 aaPredicted RBP13.69□□□□□ -0.22
TPT1-201ENST00000309246 PHKA2P46019 1235 aa13.69□□□□□ -0.22
TPT1-201ENST00000309246 BCAR1P56945 870 aa13.69□□□□□ -0.22
TPT1-201ENST00000309246 PTPN21Q16825 1174 aa13.69□□□□□ -0.22
TPT1-201ENST00000309246 TWF2Q6IBS0 349 aaKnown RBP13.69□□□□□ -0.22
TPT1-201ENST00000309246 B3GNT9Q6UX72 402 aa13.69□□□□□ -0.22
TPT1-201ENST00000309246 RUFY3Q7L099 469 aa13.69□□□□□ -0.22
TPT1-201ENST00000309246 FBXL6Q8N531 539 aa13.69□□□□□ -0.22
TPT1-201ENST00000309246 ETNPPLQ8TBG4 499 aa13.69□□□□□ -0.22
TPT1-201ENST00000309246 CASP10Q92851 521 aa13.69□□□□□ -0.22
TPT1-201ENST00000309246 PHOX2BQ99453 314 aa13.69□□□□□ -0.22
TPT1-201ENST00000309246 PIN4Q9Y237 131 aaKnown RBP13.69□□□□□ -0.22
TPT1-201ENST00000309246 ZDBF2Q9HCK1 2354 aa13.68□□□□□ -0.22
TPT1-201ENST00000309246 TDRD15B5MCY1 1934 aaKnown RBP13.68□□□□□ -0.22
TPT1-201ENST00000309246 CYP3A7-CYP3A51PA0A087WV96 503 aa13.68□□□□□ -0.22
TPT1-201ENST00000309246 TTLL13PA6NNM8 815 aa13.68□□□□□ -0.22
TPT1-201ENST00000309246 MEIS3P2A8K0S8 358 aa13.68□□□□□ -0.22
TPT1-201ENST00000309246 DDX11L8A8MPP1 907 aa13.68□□□□□ -0.22
TPT1-201ENST00000309246 M0R2N6 131 aa13.68□□□□□ -0.22
TPT1-201ENST00000309246 CPLX1O14810 134 aa13.68□□□□□ -0.22
TPT1-201ENST00000309246 ATMINO43313 823 aaPredicted RBP13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms