RNA–Protein interactions for RNA: ENST00000308537.4

PDZRN3-202, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene PDZRN3, Length 1,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-202ENST00000308537 MCM7P33993 719 aa22.16■■□□□ 1.14
PDZRN3-202ENST00000308537 RFC5P40937 340 aa22.16■■□□□ 1.14
PDZRN3-202ENST00000308537 DNM2P50570 870 aa22.16■■□□□ 1.14
PDZRN3-202ENST00000308537 EMC2Q15006 297 aa22.16■■□□□ 1.14
PDZRN3-202ENST00000308537 NAALADL2Q58DX5 795 aa22.16■■□□□ 1.14
PDZRN3-202ENST00000308537 TPH2Q8IWU9 490 aa22.16■■□□□ 1.14
PDZRN3-202ENST00000308537 PRPF31Q8WWY3 499 aaKnown RBP22.16■■□□□ 1.14
PDZRN3-202ENST00000308537 JPH2Q9BR39 696 aaPredicted RBP22.16■■□□□ 1.14
PDZRN3-202ENST00000308537 BMP2KQ9NSY1 1161 aaPredicted RBP22.16■■□□□ 1.14
PDZRN3-202ENST00000308537 COL4A3BPQ9Y5P4 624 aa22.16■■□□□ 1.14
PDZRN3-202ENST00000308537 TOB1P50616 345 aaPredicted RBP22.15■■□□□ 1.14
PDZRN3-202ENST00000308537 POLGP54098 1239 aaPredicted RBP22.15■■□□□ 1.14
PDZRN3-202ENST00000308537 SAFBQ15424 915 aaKnown RBP eCLIP22.15■■□□□ 1.14
PDZRN3-202ENST00000308537 CTC1Q2NKJ3 1217 aa22.15■■□□□ 1.14
PDZRN3-202ENST00000308537 NOSTRINQ8IVI9 506 aa22.15■■□□□ 1.14
PDZRN3-202ENST00000308537 NEK9Q8TD19 979 aa22.15■■□□□ 1.14
PDZRN3-202ENST00000308537 SLC7A3Q8WY07 619 aa22.15■■□□□ 1.14
PDZRN3-202ENST00000308537 TMX3Q96JJ7 454 aa22.15■■□□□ 1.14
PDZRN3-202ENST00000308537 NLRP4Q96MN2 994 aa22.15■■□□□ 1.14
PDZRN3-202ENST00000308537 TBC1D32Q96NH3 1257 aa22.15■■□□□ 1.14
PDZRN3-202ENST00000308537 TMEM117Q9H0C3 514 aa22.15■■□□□ 1.14
PDZRN3-202ENST00000308537 ATP6V0A4Q9HBG4 840 aa22.15■■□□□ 1.14
PDZRN3-202ENST00000308537 CHST12Q9NRB3 414 aa22.15■■□□□ 1.14
PDZRN3-202ENST00000308537 TYW1Q9NV66 732 aaKnown RBP22.15■■□□□ 1.14
PDZRN3-202ENST00000308537 A0A087WWV3 80 aa22.14■■□□□ 1.13
PDZRN3-202ENST00000308537 ZSCAN20P17040 1043 aaPredicted RBP22.14■■□□□ 1.13
PDZRN3-202ENST00000308537 ATP2B1P20020 1258 aa22.14■■□□□ 1.13
PDZRN3-202ENST00000308537 IRS1P35568 1242 aa22.14■■□□□ 1.13
PDZRN3-202ENST00000308537 LTBRP36941 435 aa22.14■■□□□ 1.13
PDZRN3-202ENST00000308537 RARRES1P49788 294 aa22.14■■□□□ 1.13
PDZRN3-202ENST00000308537 ORC2Q13416 577 aaPredicted RBP22.14■■□□□ 1.13
PDZRN3-202ENST00000308537 NBR1Q14596 966 aa22.14■■□□□ 1.13
PDZRN3-202ENST00000308537 ZNF174Q15697 407 aa22.14■■□□□ 1.13
PDZRN3-202ENST00000308537 AAK1Q2M2I8 961 aa22.14■■□□□ 1.13
PDZRN3-202ENST00000308537 XKR9Q5GH70 373 aa22.14■■□□□ 1.13
PDZRN3-202ENST00000308537 FERMT3Q86UX7 667 aa22.14■■□□□ 1.13
PDZRN3-202ENST00000308537 GADD45GIP1Q8TAE8 222 aaPredicted RBP22.14■■□□□ 1.13
PDZRN3-202ENST00000308537 SCLT1Q96NL6 688 aa22.14■■□□□ 1.13
PDZRN3-202ENST00000308537 UHRF1Q96T88 793 aaPredicted RBP22.14■■□□□ 1.13
PDZRN3-202ENST00000308537 MED24O75448 989 aa22.13■■□□□ 1.13
PDZRN3-202ENST00000308537 HOXA11P31270 313 aaPredicted RBP22.13■■□□□ 1.13
PDZRN3-202ENST00000308537 LAMTOR4Q0VGL1 99 aa22.13■■□□□ 1.13
PDZRN3-202ENST00000308537 HYAL1Q12794 435 aa22.13■■□□□ 1.13
PDZRN3-202ENST00000308537 LEXMQ3ZCV2 418 aa22.13■■□□□ 1.13
PDZRN3-202ENST00000308537 OTUD6AQ7L8S5 288 aa22.13■■□□□ 1.13
PDZRN3-202ENST00000308537 CATSPER3Q86XQ3 398 aa22.13■■□□□ 1.13
PDZRN3-202ENST00000308537 PABPC5Q96DU9 382 aaKnown RBP22.13■■□□□ 1.13
PDZRN3-202ENST00000308537 ANKEF1Q9NU02 776 aa22.13■■□□□ 1.13
PDZRN3-202ENST00000308537 C5orf42Q9H799 3197 aa22.13■■□□□ 1.13
PDZRN3-202ENST00000308537 MEIS3P2A8K0S8 358 aa22.12■■□□□ 1.13
PDZRN3-202ENST00000308537 GAS2O43903 313 aaKnown RBP22.12■■□□□ 1.13
PDZRN3-202ENST00000308537 SFPQP23246 707 aaKnown RBP eCLIP22.12■■□□□ 1.13
PDZRN3-202ENST00000308537 GTF2F1P35269 517 aaKnown RBP eCLIP22.12■■□□□ 1.13
PDZRN3-202ENST00000308537 PHKA2P46019 1235 aa22.12■■□□□ 1.13
PDZRN3-202ENST00000308537 TRAPPC10P48553 1259 aa22.12■■□□□ 1.13
PDZRN3-202ENST00000308537 TTC38Q5R3I4 469 aa22.12■■□□□ 1.13
PDZRN3-202ENST00000308537 FAM184AQ8NB25 1140 aa22.12■■□□□ 1.13
PDZRN3-202ENST00000308537 COLGALT1Q8NBJ5 622 aa22.12■■□□□ 1.13
PDZRN3-202ENST00000308537 PIGOQ8TEQ8 1089 aa22.12■■□□□ 1.13
PDZRN3-202ENST00000308537 POF1BQ8WVV4 589 aa22.12■■□□□ 1.13
PDZRN3-202ENST00000308537 PSPC1Q8WXF1 523 aaKnown RBP22.12■■□□□ 1.13
PDZRN3-202ENST00000308537 AGPAT5Q9NUQ2 364 aa22.12■■□□□ 1.13
PDZRN3-202ENST00000308537 RNF216Q9NWF9 866 aaPredicted RBP22.12■■□□□ 1.13
PDZRN3-202ENST00000308537 PCDHGC5Q9Y5F6 944 aa22.12■■□□□ 1.13
PDZRN3-202ENST00000308537 ZNF623O75123 536 aa22.11■■□□□ 1.13
PDZRN3-202ENST00000308537 EOMESO95936 686 aa22.11■■□□□ 1.13
PDZRN3-202ENST00000308537 OR52Z1P0C646 297 aa22.11■■□□□ 1.13
PDZRN3-202ENST00000308537 KCNA5P22460 613 aa22.11■■□□□ 1.13
PDZRN3-202ENST00000308537 ARL2P36404 184 aa22.11■■□□□ 1.13
PDZRN3-202ENST00000308537 DLX2Q07687 328 aaPredicted RBP22.11■■□□□ 1.13
PDZRN3-202ENST00000308537 SRGAP1Q7Z6B7 1085 aa22.11■■□□□ 1.13
PDZRN3-202ENST00000308537 ADGRD2Q7Z7M1 963 aa22.11■■□□□ 1.13
PDZRN3-202ENST00000308537 IFNLR1Q8IU57 520 aaPredicted RBP22.11■■□□□ 1.13
PDZRN3-202ENST00000308537 EXOC8Q8IYI6 725 aa22.11■■□□□ 1.13
PDZRN3-202ENST00000308537 ASAP3Q8TDY4 903 aa22.11■■□□□ 1.13
PDZRN3-202ENST00000308537 MTRQ99707 1265 aa22.11■■□□□ 1.13
PDZRN3-202ENST00000308537 INO80BQ9C086 356 aaPredicted RBP22.11■■□□□ 1.13
PDZRN3-202ENST00000308537 DACT1Q9NYF0 836 aa22.11■■□□□ 1.13
PDZRN3-202ENST00000308537 TNFRSF10AO00220 468 aa22.1■■□□□ 1.13
PDZRN3-202ENST00000308537 ST18O60284 1047 aa22.1■■□□□ 1.13
PDZRN3-202ENST00000308537 XRCC6P12956 609 aaKnown RBP eCLIP22.1■■□□□ 1.13
PDZRN3-202ENST00000308537 UBXN11Q5T124 520 aa22.1■■□□□ 1.13
PDZRN3-202ENST00000308537 POLR3CQ9BUI4 534 aaPredicted RBP22.1■■□□□ 1.13
PDZRN3-202ENST00000308537 FAM105AQ9NUU6 356 aa22.1■■□□□ 1.13
PDZRN3-202ENST00000308537 PIN4Q9Y237 131 aaKnown RBP22.1■■□□□ 1.13
PDZRN3-202ENST00000308537 HOXA2O43364 376 aa22.09■■□□□ 1.13
PDZRN3-202ENST00000308537 DGAT1O75907 488 aa22.09■■□□□ 1.13
PDZRN3-202ENST00000308537 FGF18O76093 207 aa22.09■■□□□ 1.13
PDZRN3-202ENST00000308537 SRGAP2CP0DJJ0 459 aa22.09■■□□□ 1.13
PDZRN3-202ENST00000308537 GLRA2P23416 452 aa22.09■■□□□ 1.13
PDZRN3-202ENST00000308537 TECP42680 631 aa22.09■■□□□ 1.13
PDZRN3-202ENST00000308537 PTENP60484 403 aa22.09■■□□□ 1.13
PDZRN3-202ENST00000308537 ECM1Q16610 540 aa22.09■■□□□ 1.13
PDZRN3-202ENST00000308537 AMHR2Q16671 573 aa22.09■■□□□ 1.13
PDZRN3-202ENST00000308537 CATSPER4Q7RTX7 472 aa22.09■■□□□ 1.13
PDZRN3-202ENST00000308537 LRRC43Q8N309 656 aa22.09■■□□□ 1.13
PDZRN3-202ENST00000308537 RNF149Q8NC42 400 aa22.09■■□□□ 1.13
PDZRN3-202ENST00000308537 IL27Q8NEV9 243 aa22.09■■□□□ 1.13
PDZRN3-202ENST00000308537 HELQQ8TDG4 1101 aa22.09■■□□□ 1.13
PDZRN3-202ENST00000308537 TCP11Q8WWU5 503 aa22.09■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms