RNA–Protein interactions for RNA: ENST00000308354.11

PDLIM2-202, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,236 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-202ENST00000308354 GOLGA5Q8TBA6 731 aa24.55■■□□□ 1.52
PDLIM2-202ENST00000308354 HAUS4Q9H6D7 363 aa24.55■■□□□ 1.52
PDLIM2-202ENST00000308354 KMT5AQ9NQR1 393 aa24.55■■□□□ 1.52
PDLIM2-202ENST00000308354 CEP72Q9P209 647 aa24.55■■□□□ 1.52
PDLIM2-202ENST00000308354 EIF3CLB5ME19 914 aaKnown RBP24.54■■□□□ 1.52
PDLIM2-202ENST00000308354 OATP04181 439 aa24.54■■□□□ 1.52
PDLIM2-202ENST00000308354 TRIM49P0CI25 452 aa24.54■■□□□ 1.52
PDLIM2-202ENST00000308354 TRIM49CP0CI26 452 aa24.54■■□□□ 1.52
PDLIM2-202ENST00000308354 SMTNP53814 917 aa24.54■■□□□ 1.52
PDLIM2-202ENST00000308354 CYP27A1Q02318 531 aa24.54■■□□□ 1.52
PDLIM2-202ENST00000308354 ALCAMQ13740 583 aa24.54■■□□□ 1.52
PDLIM2-202ENST00000308354 EXOC3L4Q17RC7 722 aa24.54■■□□□ 1.52
PDLIM2-202ENST00000308354 CCDC122Q5T0U0 273 aa24.54■■□□□ 1.52
PDLIM2-202ENST00000308354 KIAA1328Q86T90 577 aa24.54■■□□□ 1.52
PDLIM2-202ENST00000308354 KIFAP3Q92845 792 aa24.54■■□□□ 1.52
PDLIM2-202ENST00000308354 EIF3CQ99613 913 aaKnown RBP24.54■■□□□ 1.52
PDLIM2-202ENST00000308354 ATP6V0A4Q9HBG4 840 aa24.54■■□□□ 1.52
PDLIM2-202ENST00000308354 DDX41Q9UJV9 622 aaKnown RBP24.54■■□□□ 1.52
PDLIM2-202ENST00000308354 MYH9P35579 1960 aaKnown RBP24.54■■□□□ 1.52
PDLIM2-202ENST00000308354 ADGRA3Q8IWK6 1321 aa24.54■■□□□ 1.52
PDLIM2-202ENST00000308354 DENND3A2RUS2 1198 aa24.54■■□□□ 1.52
PDLIM2-202ENST00000308354 TULP1O00294 542 aaPredicted RBP24.54■■□□□ 1.52
PDLIM2-202ENST00000308354 TCF7P36402 384 aaPredicted RBP24.54■■□□□ 1.52
PDLIM2-202ENST00000308354 DHX30Q7L2E3 1194 aaKnown RBP eCLIP24.54■■□□□ 1.525e-6■■■□□ 17.2
PDLIM2-202ENST00000308354 NAPGQ99747 312 aaPredicted RBP24.54■■□□□ 1.52
PDLIM2-202ENST00000308354 MKNK1Q9BUB5 465 aa24.54■■□□□ 1.52
PDLIM2-202ENST00000308354 ST6GALNAC4Q9H4F1 302 aa24.54■■□□□ 1.52
PDLIM2-202ENST00000308354 RCCD1A6NED2 376 aa24.53■■□□□ 1.52
PDLIM2-202ENST00000308354 IPO7O95373 1038 aaKnown RBP24.53■■□□□ 1.52
PDLIM2-202ENST00000308354 TGFB3P10600 412 aa24.53■■□□□ 1.52
PDLIM2-202ENST00000308354 PON1P27169 355 aa24.53■■□□□ 1.52
PDLIM2-202ENST00000308354 POLGP54098 1239 aaPredicted RBP24.53■■□□□ 1.52
PDLIM2-202ENST00000308354 HSDL1Q3SXM5 330 aa24.53■■□□□ 1.52
PDLIM2-202ENST00000308354 METTL7BQ6UX53 244 aa24.53■■□□□ 1.52
PDLIM2-202ENST00000308354 TMEM143Q96AN5 459 aa24.53■■□□□ 1.52
PDLIM2-202ENST00000308354 CCDC42Q96M95 316 aa24.53■■□□□ 1.52
PDLIM2-202ENST00000308354 MPHOSPH6Q99547 160 aaKnown RBP24.53■■□□□ 1.52
PDLIM2-202ENST00000308354 GANQ9H2C0 597 aa24.53■■□□□ 1.52
PDLIM2-202ENST00000308354 NMRK2Q9NPI5 230 aa24.53■■□□□ 1.52
PDLIM2-202ENST00000308354 PDGFCQ9NRA1 345 aa24.53■■□□□ 1.52
PDLIM2-202ENST00000308354 TBX20Q9UMR3 447 aa24.53■■□□□ 1.52
PDLIM2-202ENST00000308354 MCM3APO60318 1980 aa24.53■■□□□ 1.52
PDLIM2-202ENST00000308354 IGKV6D-21A0A0A0MT36 114 aa24.53■■□□□ 1.52
PDLIM2-202ENST00000308354 UNCXA6NJT0 531 aa24.53■■□□□ 1.52
PDLIM2-202ENST00000308354 DPY19L2P1Q6NXN4 242 aa24.53■■□□□ 1.52
PDLIM2-202ENST00000308354 SLC9A9Q8IVB4 645 aa24.53■■□□□ 1.52
PDLIM2-202ENST00000308354 MCPH1Q8NEM0 835 aa24.53■■□□□ 1.52
PDLIM2-202ENST00000308354 COPS5Q92905 334 aa24.53■■□□□ 1.52
PDLIM2-202ENST00000308354 JAKMIP2Q96AA8 810 aa24.53■■□□□ 1.52
PDLIM2-202ENST00000308354 LACRTQ9GZZ8 138 aa24.53■■□□□ 1.52
PDLIM2-202ENST00000308354 POLR3FQ9H1D9 316 aaPredicted RBP24.53■■□□□ 1.52
PDLIM2-202ENST00000308354 CDC23Q9UJX2 597 aa24.53■■□□□ 1.52
PDLIM2-202ENST00000308354 ANKRD63C9JTQ0 380 aa24.52■■□□□ 1.52
PDLIM2-202ENST00000308354 ZNF263O14978 683 aa24.52■■□□□ 1.52
PDLIM2-202ENST00000308354 EIF4A3P38919 411 aaKnown RBP24.52■■□□□ 1.52
PDLIM2-202ENST00000308354 ARID5AQ03989 594 aa24.52■■□□□ 1.52
PDLIM2-202ENST00000308354 EMC2Q15006 297 aa24.52■■□□□ 1.52
PDLIM2-202ENST00000308354 EDEM3Q9BZQ6 932 aa24.52■■□□□ 1.52
PDLIM2-202ENST00000308354 GCNT4Q9P109 453 aa24.52■■□□□ 1.52
PDLIM2-202ENST00000308354 LRRC37A2A6NM11 1700 aa24.52■■□□□ 1.52
PDLIM2-202ENST00000308354 ARID2Q68CP9 1835 aa24.52■■□□□ 1.52
PDLIM2-202ENST00000308354 TLR2O60603 784 aa24.51■■□□□ 1.51
PDLIM2-202ENST00000308354 ECM2O94769 699 aaPredicted RBP24.51■■□□□ 1.51
PDLIM2-202ENST00000308354 H2AFXP16104 143 aaPredicted RBP24.51■■□□□ 1.51
PDLIM2-202ENST00000308354 STAT5BP51692 787 aa24.51■■□□□ 1.51
PDLIM2-202ENST00000308354 FKBP1BP68106 108 aa24.51■■□□□ 1.51
PDLIM2-202ENST00000308354 ENOX2Q16206 610 aaKnown RBP24.51■■□□□ 1.51
PDLIM2-202ENST00000308354 TRIM50Q86XT4 487 aa24.51■■□□□ 1.51
PDLIM2-202ENST00000308354 SHCBP1Q8NEM2 672 aa24.51■■□□□ 1.51
PDLIM2-202ENST00000308354 SEPT1Q8WYJ6 367 aa24.51■■□□□ 1.51
PDLIM2-202ENST00000308354 PTPN18Q99952 460 aa24.51■■□□□ 1.51
PDLIM2-202ENST00000308354 HSPBP1Q9NZL4 362 aa24.51■■□□□ 1.51
PDLIM2-202ENST00000308354 GOLGA8IPA6NC78 632 aa24.51■■□□□ 1.51
PDLIM2-202ENST00000308354 GOLGA8JA6NMD2 632 aa24.51■■□□□ 1.51
PDLIM2-202ENST00000308354 TFRCP02786 760 aaKnown RBP24.51■■□□□ 1.51
PDLIM2-202ENST00000308354 MARK3P27448 753 aa24.51■■□□□ 1.51
PDLIM2-202ENST00000308354 DLG4P78352 724 aa24.51■■□□□ 1.51
PDLIM2-202ENST00000308354 RAPGEF1Q13905 1077 aa24.51■■□□□ 1.51
PDLIM2-202ENST00000308354 CBWD6Q4V339 395 aa24.51■■□□□ 1.51
PDLIM2-202ENST00000308354 CBWD3Q5JTY5 395 aa24.51■■□□□ 1.51
PDLIM2-202ENST00000308354 CBWD5Q5RIA9 395 aa24.51■■□□□ 1.51
PDLIM2-202ENST00000308354 TEX35Q5T0J7 233 aa24.51■■□□□ 1.51
PDLIM2-202ENST00000308354 SPRYD7Q5W111 196 aa24.51■■□□□ 1.51
PDLIM2-202ENST00000308354 CST9Q5W186 159 aa24.51■■□□□ 1.51
PDLIM2-202ENST00000308354 GBP6Q6ZN66 633 aa24.51■■□□□ 1.51
PDLIM2-202ENST00000308354 EPC1Q9H2F5 836 aa24.51■■□□□ 1.51
PDLIM2-202ENST00000308354 ZNFX1Q9P2E3 1918 aaKnown RBP24.51■■□□□ 1.51
PDLIM2-202ENST00000308354 GJB7Q6PEY0 223 aa24.5■■□□□ 1.51
PDLIM2-202ENST00000308354 ZNF662Q6ZS27 426 aa24.5■■□□□ 1.51
PDLIM2-202ENST00000308354 RSRC2Q7L4I2 434 aaKnown RBP24.5■■□□□ 1.51
PDLIM2-202ENST00000308354 DEF6Q9H4E7 631 aa24.5■■□□□ 1.51
PDLIM2-202ENST00000308354 FHOD1Q9Y613 1164 aa24.5■■□□□ 1.51
PDLIM2-202ENST00000308354 PCNTO95613 3336 aa24.5■■□□□ 1.51
PDLIM2-202ENST00000308354 UCHL3P15374 230 aa24.5■■□□□ 1.51
PDLIM2-202ENST00000308354 ADORA2AP29274 412 aa24.5■■□□□ 1.51
PDLIM2-202ENST00000308354 ADSSP30520 456 aa24.5■■□□□ 1.51
PDLIM2-202ENST00000308354 FMO5P49326 533 aa24.5■■□□□ 1.51
PDLIM2-202ENST00000308354 BFSP1Q12934 665 aa24.5■■□□□ 1.51
PDLIM2-202ENST00000308354 KLHDC7AQ5VTJ3 777 aa24.5■■□□□ 1.51
PDLIM2-202ENST00000308354 SFMBT2Q5VUG0 894 aa24.5■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms