RNA–Protein interactions for RNA: ENST00000308330.2

LEMD3-201, Transcript of LEM domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LEMD3, Length 4,764 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-201ENST00000308330 CFAP36Q96G28 342 aa16.34■□□□□ 0.21
LEMD3-201ENST00000308330 NOC4LQ9BVI4 516 aaKnown RBP16.34■□□□□ 0.21
LEMD3-201ENST00000308330 PLA2G12BQ9BX93 195 aa16.34■□□□□ 0.21
LEMD3-201ENST00000308330 IFIH1Q9BYX4 1025 aaKnown RBP16.34■□□□□ 0.21
LEMD3-201ENST00000308330 IKBKBO14920 756 aa16.34■□□□□ 0.21
LEMD3-201ENST00000308330 NQO1P15559 274 aaKnown RBP16.34■□□□□ 0.21
LEMD3-201ENST00000308330 NDUFA5Q16718 116 aa16.34■□□□□ 0.21
LEMD3-201ENST00000308330 INTS5Q6P9B9 1019 aaKnown RBP16.34■□□□□ 0.21
LEMD3-201ENST00000308330 MTFR1LQ9H019 292 aa16.34■□□□□ 0.21
LEMD3-201ENST00000308330 GYG2O15488 501 aa16.33■□□□□ 0.21
LEMD3-201ENST00000308330 ZCCHC18P0CG32 403 aa16.33■□□□□ 0.21
LEMD3-201ENST00000308330 EIF3BP55884 814 aaKnown RBP16.33■□□□□ 0.21
LEMD3-201ENST00000308330 PTGDRQ13258 359 aa16.33■□□□□ 0.21
LEMD3-201ENST00000308330 FAM102BQ5T8I3 360 aa16.33■□□□□ 0.21
LEMD3-201ENST00000308330 KRT12Q99456 494 aa16.33■□□□□ 0.21
LEMD3-201ENST00000308330 SLC39A2Q9NP94 309 aa16.33■□□□□ 0.21
LEMD3-201ENST00000308330 SOWAHDA6NJG2 315 aa16.33■□□□□ 0.2
LEMD3-201ENST00000308330 USP17L5A8MUK1 530 aa16.33■□□□□ 0.2
LEMD3-201ENST00000308330 TMOD1P28289 359 aa16.33■□□□□ 0.2
LEMD3-201ENST00000308330 GJC1P36383 396 aa16.33■□□□□ 0.2
LEMD3-201ENST00000308330 RPS6KA1Q15418 735 aa16.33■□□□□ 0.2
LEMD3-201ENST00000308330 HACE1Q8IYU2 909 aa16.33■□□□□ 0.2
LEMD3-201ENST00000308330 CTNND2Q9UQB3 1225 aa16.33■□□□□ 0.2
LEMD3-201ENST00000308330 AP3B1O00203 1094 aa16.33■□□□□ 0.2
LEMD3-201ENST00000308330 AP2B1P63010 937 aa16.33■□□□□ 0.2
LEMD3-201ENST00000308330 RASA3Q14644 834 aa16.33■□□□□ 0.2
LEMD3-201ENST00000308330 AGGF1Q8N302 714 aaeCLIP16.33■□□□□ 0.2
LEMD3-201ENST00000308330 PGBD1Q96JS3 809 aa16.33■□□□□ 0.2
LEMD3-201ENST00000308330 BLZF1Q9H2G9 400 aa16.33■□□□□ 0.2
LEMD3-201ENST00000308330 TAF1DQ9H5J8 278 aaPredicted RBP16.33■□□□□ 0.2
LEMD3-201ENST00000308330 KRT15P19012 456 aa16.33■□□□□ 0.2
LEMD3-201ENST00000308330 YTHDF3Q7Z739 585 aaKnown RBP16.33■□□□□ 0.2
LEMD3-201ENST00000308330 RASSF3Q86WH2 238 aa16.33■□□□□ 0.2
LEMD3-201ENST00000308330 GPBP1Q86WP2 473 aa16.33■□□□□ 0.2
LEMD3-201ENST00000308330 KIF2BQ8N4N8 673 aa16.33■□□□□ 0.2
LEMD3-201ENST00000308330 ZBTB8BQ8NAP8 495 aaPredicted RBP16.33■□□□□ 0.2
LEMD3-201ENST00000308330 VPS37BQ9H9H4 285 aa16.33■□□□□ 0.2
LEMD3-201ENST00000308330 NRBP2Q9NSY0 501 aa16.33■□□□□ 0.2
LEMD3-201ENST00000308330 SYNRGQ9UMZ2 1314 aa16.32■□□□□ 0.2
LEMD3-201ENST00000308330 CCDC166P0CW27 439 aa16.32■□□□□ 0.2
LEMD3-201ENST00000308330 MAGOHP61326 146 aaKnown RBP16.32■□□□□ 0.2
LEMD3-201ENST00000308330 TOGARAM2Q6ZUX3 1019 aa16.32■□□□□ 0.2
LEMD3-201ENST00000308330 MYOCDQ8IZQ8 938 aa16.32■□□□□ 0.2
LEMD3-201ENST00000308330 MAGOHBQ96A72 148 aaKnown RBP16.32■□□□□ 0.2
LEMD3-201ENST00000308330 RILPQ96NA2 401 aa16.32■□□□□ 0.2
LEMD3-201ENST00000308330 TMED5Q9Y3A6 229 aa16.32■□□□□ 0.2
LEMD3-201ENST00000308330 WDR91A4D1P6 747 aa16.32■□□□□ 0.2
LEMD3-201ENST00000308330 USP17L10C9JJH3 530 aa16.32■□□□□ 0.2
LEMD3-201ENST00000308330 KRT19P08727 400 aa16.32■□□□□ 0.2
LEMD3-201ENST00000308330 FLT3P36888 993 aa16.32■□□□□ 0.2
LEMD3-201ENST00000308330 ATG9AQ7Z3C6 839 aa16.32■□□□□ 0.2
LEMD3-201ENST00000308330 SESTD1Q86VW0 696 aa16.32■□□□□ 0.2
LEMD3-201ENST00000308330 KAT2BQ92831 832 aa16.32■□□□□ 0.2
LEMD3-201ENST00000308330 NUP58Q9BVL2 599 aa16.32■□□□□ 0.2
LEMD3-201ENST00000308330 ASCC2Q9H1I8 757 aaPredicted RBP16.32■□□□□ 0.2
LEMD3-201ENST00000308330 PARP2Q9UGN5 583 aa16.32■□□□□ 0.2
LEMD3-201ENST00000308330 SNAP25P60880 206 aa16.32■□□□□ 0.2
LEMD3-201ENST00000308330 IRGCQ6NXR0 463 aa16.32■□□□□ 0.2
LEMD3-201ENST00000308330 TUBA3EQ6PEY2 450 aa16.32■□□□□ 0.2
LEMD3-201ENST00000308330 ZBTB8OSQ8IWT0 167 aa16.32■□□□□ 0.2
LEMD3-201ENST00000308330 ZDHHC9Q9Y397 364 aa16.32■□□□□ 0.2
LEMD3-201ENST00000308330 CALUO43852 315 aaPredicted RBP16.31■□□□□ 0.2
LEMD3-201ENST00000308330 ESRRAP11474 423 aaPredicted RBP16.31■□□□□ 0.2
LEMD3-201ENST00000308330 NFKBIAP25963 317 aa16.31■□□□□ 0.2
LEMD3-201ENST00000308330 LIFRP42702 1097 aa16.31■□□□□ 0.2
LEMD3-201ENST00000308330 CEP55Q53EZ4 464 aa16.31■□□□□ 0.2
LEMD3-201ENST00000308330 KAZNQ674X7 775 aa16.31■□□□□ 0.2
LEMD3-201ENST00000308330 RETREG2Q8NC44 543 aa16.31■□□□□ 0.2
LEMD3-201ENST00000308330 TNIP2Q8NFZ5 429 aa16.31■□□□□ 0.2
LEMD3-201ENST00000308330 ABCF3Q9NUQ8 709 aa16.31■□□□□ 0.2
LEMD3-201ENST00000308330 GMEB1Q9Y692 573 aa16.31■□□□□ 0.2
LEMD3-201ENST00000308330 KDM3AQ9Y4C1 1321 aa16.31■□□□□ 0.2
LEMD3-201ENST00000308330 EIF2AK2P19525 551 aaKnown RBP16.31■□□□□ 0.2
LEMD3-201ENST00000308330 CDR2Q01850 454 aa16.31■□□□□ 0.2
LEMD3-201ENST00000308330 CDC37Q16543 378 aaPredicted RBP16.31■□□□□ 0.2
LEMD3-201ENST00000308330 CEP78Q5JTW2 689 aa16.31■□□□□ 0.2
LEMD3-201ENST00000308330 ARHGEF18Q6ZSZ5 1173 aa16.31■□□□□ 0.2
LEMD3-201ENST00000308330 TRMT44Q8IYL2 757 aaKnown RBP16.31■□□□□ 0.2
LEMD3-201ENST00000308330 UHMK1Q8TAS1 419 aaKnown RBP16.31■□□□□ 0.2
LEMD3-201ENST00000308330 MAGEC3Q8TD91 643 aa16.31■□□□□ 0.2
LEMD3-201ENST00000308330 SH2B2O14492 632 aaPredicted RBP16.31■□□□□ 0.2
LEMD3-201ENST00000308330 CSF1RP07333 972 aa16.31■□□□□ 0.2
LEMD3-201ENST00000308330 GSTA1P08263 222 aa16.31■□□□□ 0.2
LEMD3-201ENST00000308330 MCF2P10911 925 aa16.31■□□□□ 0.2
LEMD3-201ENST00000308330 TRIM63Q969Q1 353 aa16.31■□□□□ 0.2
LEMD3-201ENST00000308330 RNPC3Q96LT9 517 aaKnown RBP16.31■□□□□ 0.2
LEMD3-201ENST00000308330 DPH5Q9H2P9 285 aa16.31■□□□□ 0.2
LEMD3-201ENST00000308330 POLD4Q9HCU8 107 aa16.31■□□□□ 0.2
LEMD3-201ENST00000308330 RPAP1Q9BWH6 1393 aaPredicted RBP16.31■□□□□ 0.2
LEMD3-201ENST00000308330 GOLGA8IPA6NC78 632 aa16.31■□□□□ 0.2
LEMD3-201ENST00000308330 PHF20L1A8MW92 1017 aa16.31■□□□□ 0.2
LEMD3-201ENST00000308330 HOXC10Q9NYD6 342 aa16.31■□□□□ 0.2
LEMD3-201ENST00000308330 SERTAD1Q9UHV2 236 aa16.31■□□□□ 0.2
LEMD3-201ENST00000308330 UTYO14607 1347 aa16.31■□□□□ 0.2
LEMD3-201ENST00000308330 I3L4J1 428 aa16.3■□□□□ 0.2
LEMD3-201ENST00000308330 STRNO43815 780 aa16.3■□□□□ 0.2
LEMD3-201ENST00000308330 GAS8O95995 478 aa16.3■□□□□ 0.2
LEMD3-201ENST00000308330 IFNAR1P17181 557 aa16.3■□□□□ 0.2
LEMD3-201ENST00000308330 POSTNQ15063 836 aa16.3■□□□□ 0.2
LEMD3-201ENST00000308330 Q3C1V9 767 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms