RNA–Protein interactions for RNA: ENST00000304494.9

CDKN2A-201, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best) BASIC

Gene CDKN2A, Length 1,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-201ENST00000304494 CSDE1O75534 798 aaKnown RBP29.49■■■□□ 2.31
CDKN2A-201ENST00000304494 CD2BP2O95400 341 aaKnown RBP29.49■■■□□ 2.31
CDKN2A-201ENST00000304494 XRCC6P12956 609 aaKnown RBP eCLIP29.49■■■□□ 2.31
CDKN2A-201ENST00000304494 FAM102BQ5T8I3 360 aa29.49■■■□□ 2.31
CDKN2A-201ENST00000304494 TUFT1Q9NNX1 390 aa29.49■■■□□ 2.31
CDKN2A-201ENST00000304494 A0A0U1RQF3 1178 aa29.48■■■□□ 2.31
CDKN2A-201ENST00000304494 FGFR1P11362 822 aa29.48■■■□□ 2.31
CDKN2A-201ENST00000304494 TECP42680 631 aa29.48■■■□□ 2.31
CDKN2A-201ENST00000304494 LAMTOR4Q0VGL1 99 aa29.48■■■□□ 2.31
CDKN2A-201ENST00000304494 ECHDC2Q86YB7 292 aa29.48■■■□□ 2.31
CDKN2A-201ENST00000304494 ERMNQ8TAM6 284 aa29.48■■■□□ 2.31
CDKN2A-201ENST00000304494 IFT122Q9HBG6 1241 aa29.48■■■□□ 2.31
CDKN2A-201ENST00000304494 AAASQ9NRG9 546 aa29.48■■■□□ 2.31
CDKN2A-201ENST00000304494 BMP2KQ9NSY1 1161 aaPredicted RBP29.48■■■□□ 2.31
CDKN2A-201ENST00000304494 GRM6O15303 877 aa29.47■■■□□ 2.31
CDKN2A-201ENST00000304494 DGAT1O75907 488 aa29.47■■■□□ 2.31
CDKN2A-201ENST00000304494 EOMESO95936 686 aa29.47■■■□□ 2.31
CDKN2A-201ENST00000304494 TFF2Q03403 129 aa29.47■■■□□ 2.31
CDKN2A-201ENST00000304494 SPOUT1Q5T280 376 aaKnown RBP29.47■■■□□ 2.31
CDKN2A-201ENST00000304494 CATSPER4Q7RTX7 472 aa29.47■■■□□ 2.31
CDKN2A-201ENST00000304494 ABI1Q8IZP0 508 aa29.47■■■□□ 2.31
CDKN2A-201ENST00000304494 TMEM117Q9H0C3 514 aa29.47■■■□□ 2.31
CDKN2A-201ENST00000304494 NSUN3Q9H649 340 aaKnown RBP29.47■■■□□ 2.31
CDKN2A-201ENST00000304494 SRGAP2CP0DJJ0 459 aa29.46■■■□□ 2.31
CDKN2A-201ENST00000304494 RARRES1P49788 294 aa29.46■■■□□ 2.31
CDKN2A-201ENST00000304494 MXD4Q14582 209 aaPredicted RBP29.46■■■□□ 2.31
CDKN2A-201ENST00000304494 SRGAP1Q7Z6B7 1085 aa29.46■■■□□ 2.31
CDKN2A-201ENST00000304494 FERMT3Q86UX7 667 aa29.46■■■□□ 2.31
CDKN2A-201ENST00000304494 POLR3CQ9BUI4 534 aaPredicted RBP29.46■■■□□ 2.31
CDKN2A-201ENST00000304494 TRAIPQ9BWF2 469 aa29.46■■■□□ 2.31
CDKN2A-201ENST00000304494 PLAGL2Q9UPG8 496 aa29.46■■■□□ 2.31
CDKN2A-201ENST00000304494 PIN4Q9Y237 131 aaKnown RBP29.46■■■□□ 2.31
CDKN2A-201ENST00000304494 ZSCAN21Q9Y5A6 473 aaPredicted RBP29.46■■■□□ 2.31
CDKN2A-201ENST00000304494 PCDHB12Q9Y5F1 795 aa29.46■■■□□ 2.31
CDKN2A-201ENST00000304494 ARID2Q68CP9 1835 aa29.45■■■□□ 2.31
CDKN2A-201ENST00000304494 SPATA31C1P0DKV0 1188 aa29.45■■■□□ 2.31
CDKN2A-201ENST00000304494 SKIP12755 728 aa29.45■■■□□ 2.31
CDKN2A-201ENST00000304494 GJB2P29033 226 aa29.45■■■□□ 2.31
CDKN2A-201ENST00000304494 CATSPER3Q86XQ3 398 aa29.45■■■□□ 2.31
CDKN2A-201ENST00000304494 RNF169Q8NCN4 708 aa29.45■■■□□ 2.31
CDKN2A-201ENST00000304494 HAUS3Q68CZ6 603 aa29.44■■■□□ 2.3
CDKN2A-201ENST00000304494 MCTP1Q6DN14 999 aa29.44■■■□□ 2.3
CDKN2A-201ENST00000304494 TWF2Q6IBS0 349 aaKnown RBP29.44■■■□□ 2.3
CDKN2A-201ENST00000304494 KLHL23Q8NBE8 558 aa29.44■■■□□ 2.3
CDKN2A-201ENST00000304494 RNF149Q8NC42 400 aa29.44■■■□□ 2.3
CDKN2A-201ENST00000304494 PIGOQ8TEQ8 1089 aa29.44■■■□□ 2.3
CDKN2A-201ENST00000304494 ALG13Q9NP73 1137 aaKnown RBP29.44■■■□□ 2.3
CDKN2A-201ENST00000304494 XPNPEP1Q9NQW7 623 aa29.44■■■□□ 2.3
CDKN2A-201ENST00000304494 TYW1Q9NV66 732 aaKnown RBP29.44■■■□□ 2.3
CDKN2A-201ENST00000304494 SMC3Q9UQE7 1217 aa29.44■■■□□ 2.3
CDKN2A-201ENST00000304494 FNDC1Q4ZHG4 1894 aaPredicted RBP29.43■■■□□ 2.3
CDKN2A-201ENST00000304494 H3BQV1 296 aa29.43■■■□□ 2.3
CDKN2A-201ENST00000304494 RPA1P27694 616 aa29.43■■■□□ 2.3
CDKN2A-201ENST00000304494 PHKA2P46019 1235 aa29.43■■■□□ 2.3
CDKN2A-201ENST00000304494 FXR2P51116 673 aaKnown RBP eCLIP29.43■■■□□ 2.3
CDKN2A-201ENST00000304494 TFDP1Q14186 410 aa29.43■■■□□ 2.3
CDKN2A-201ENST00000304494 NBR1Q14596 966 aa29.43■■■□□ 2.3
CDKN2A-201ENST00000304494 CSPP1Q1MSJ5 1256 aa29.43■■■□□ 2.3
CDKN2A-201ENST00000304494 TCEAL5Q5H9L2 206 aa29.43■■■□□ 2.3
CDKN2A-201ENST00000304494 ZNF598Q86UK7 904 aaKnown RBP29.43■■■□□ 2.3
CDKN2A-201ENST00000304494 RSPH1Q8WYR4 309 aa29.43■■■□□ 2.3
CDKN2A-201ENST00000304494 CASD1Q96PB1 797 aa29.43■■■□□ 2.3
CDKN2A-201ENST00000304494 NACC1Q96RE7 527 aa29.43■■■□□ 2.3
CDKN2A-201ENST00000304494 LAD1O00515 517 aa29.42■■■□□ 2.3
CDKN2A-201ENST00000304494 MED24O75448 989 aa29.42■■■□□ 2.3
CDKN2A-201ENST00000304494 ITGB1P05556 798 aa29.42■■■□□ 2.3
CDKN2A-201ENST00000304494 LAG3P18627 525 aa29.42■■■□□ 2.3
CDKN2A-201ENST00000304494 TOB1P50616 345 aaPredicted RBP29.42■■■□□ 2.3
CDKN2A-201ENST00000304494 RAB27AP51159 221 aa29.42■■■□□ 2.3
CDKN2A-201ENST00000304494 LRRC43Q8N309 656 aa29.42■■■□□ 2.3
CDKN2A-201ENST00000304494 C4orf32Q8N8J7 132 aa29.42■■■□□ 2.3
CDKN2A-201ENST00000304494 RAB34Q9BZG1 259 aa29.42■■■□□ 2.3
CDKN2A-201ENST00000304494 UBE2ZQ9H832 354 aaPredicted RBP29.42■■■□□ 2.3
CDKN2A-201ENST00000304494 AGPAT5Q9NUQ2 364 aa29.42■■■□□ 2.3
CDKN2A-201ENST00000304494 RNF19AQ9NV58 838 aa29.42■■■□□ 2.3
CDKN2A-201ENST00000304494 DBR1Q9UK59 544 aaKnown RBP29.42■■■□□ 2.3
CDKN2A-201ENST00000304494 STK24Q9Y6E0 443 aa29.42■■■□□ 2.3
CDKN2A-201ENST00000304494 KIAA1671Q9BY89 1806 aa29.42■■■□□ 2.3
CDKN2A-201ENST00000304494 MUTP22033 750 aa29.41■■■□□ 2.3
CDKN2A-201ENST00000304494 POU5F1BQ06416 359 aa29.41■■■□□ 2.3
CDKN2A-201ENST00000304494 PTGDRQ13258 359 aa29.41■■■□□ 2.3
CDKN2A-201ENST00000304494 PCBP1Q15365 356 aaKnown RBP eCLIP29.41■■■□□ 2.3
CDKN2A-201ENST00000304494 SPPL3Q8TCT6 385 aa29.41■■■□□ 2.3
CDKN2A-201ENST00000304494 ADAMTS19Q8TE59 1207 aa29.41■■■□□ 2.3
CDKN2A-201ENST00000304494 CWH43Q9H720 699 aa29.41■■■□□ 2.3
CDKN2A-201ENST00000304494 PCDHB6Q9Y5E3 794 aa29.41■■■□□ 2.3
CDKN2A-201ENST00000304494 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP29.4■■■□□ 2.3
CDKN2A-201ENST00000304494 NCK2O43639 380 aa29.4■■■□□ 2.3
CDKN2A-201ENST00000304494 BMP1P13497 986 aa29.4■■■□□ 2.3
CDKN2A-201ENST00000304494 ATF7P17544 494 aaPredicted RBP29.4■■■□□ 2.3
CDKN2A-201ENST00000304494 KCNQ1P51787 676 aa29.4■■■□□ 2.3
CDKN2A-201ENST00000304494 PDIA5Q14554 519 aa29.4■■■□□ 2.3
CDKN2A-201ENST00000304494 RILPL1Q5EBL4 403 aa29.4■■■□□ 2.3
CDKN2A-201ENST00000304494 COLGALT1Q8NBJ5 622 aa29.4■■■□□ 2.3
CDKN2A-201ENST00000304494 BACH2Q9BYV9 841 aa29.4■■■□□ 2.3
CDKN2A-201ENST00000304494 MINDY3Q9H8M7 445 aa29.4■■■□□ 2.3
CDKN2A-201ENST00000304494 FAM105AQ9NUU6 356 aa29.4■■■□□ 2.3
CDKN2A-201ENST00000304494 LRWD1Q9UFC0 647 aa29.4■■■□□ 2.3
CDKN2A-201ENST00000304494 ERLIN2O94905 339 aa29.39■■■□□ 2.3
CDKN2A-201ENST00000304494 ARL2P36404 184 aa29.39■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms