RNA–Protein interactions for RNA: ENST00000304449.5

NKRF-201, Transcript of NFKB repressing factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NKRF, Length 3,269 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKRF-201ENST00000304449 LRIG3Q6UXM1 1119 aa8.6□□□□□ -1.03
NKRF-201ENST00000304449 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.6□□□□□ -1.03
NKRF-201ENST00000304449 CATSPER3Q86XQ3 398 aa8.6□□□□□ -1.03
NKRF-201ENST00000304449 UIMC1Q96RL1 719 aa8.6□□□□□ -1.03
NKRF-201ENST00000304449 PSMD1Q99460 953 aa8.6□□□□□ -1.03
NKRF-201ENST00000304449 TSC22D3Q99576 134 aa8.6□□□□□ -1.03
NKRF-201ENST00000304449 GPR88Q9GZN0 384 aa8.6□□□□□ -1.03
NKRF-201ENST00000304449 DHX36Q9H2U1 1008 aaKnown RBP8.6□□□□□ -1.03
NKRF-201ENST00000304449 BCAS3Q9H6U6 928 aa8.6□□□□□ -1.03
NKRF-201ENST00000304449 KIAA1024Q9UPX6 916 aa8.6□□□□□ -1.03
NKRF-201ENST00000304449 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.6□□□□□ -1.03
NKRF-201ENST00000304449 ZMYM2Q9UBW7 1377 aa8.6□□□□□ -1.03
NKRF-201ENST00000304449 A0A0G2JS52 829 aa8.6□□□□□ -1.03
NKRF-201ENST00000304449 PPIP5K2O43314 1243 aa8.6□□□□□ -1.03
NKRF-201ENST00000304449 RANBP1P43487 201 aa8.6□□□□□ -1.03
NKRF-201ENST00000304449 RNASELQ05823 741 aaKnown RBP8.6□□□□□ -1.03
NKRF-201ENST00000304449 Q4G0T1 1027 aa8.6□□□□□ -1.03
NKRF-201ENST00000304449 DPP8Q6V1X1 898 aaPredicted RBP8.6□□□□□ -1.03
NKRF-201ENST00000304449 FAM47EQ6ZV65 393 aa8.6□□□□□ -1.03
NKRF-201ENST00000304449 LONP2Q86WA8 852 aa8.6□□□□□ -1.03
NKRF-201ENST00000304449 SYT2Q8N9I0 419 aaPredicted RBP8.6□□□□□ -1.03
NKRF-201ENST00000304449 TPCN2Q8NHX9 752 aa8.6□□□□□ -1.03
NKRF-201ENST00000304449 MKL1Q969V6 931 aa8.6□□□□□ -1.03
NKRF-201ENST00000304449 HES6Q96HZ4 224 aa8.6□□□□□ -1.03
NKRF-201ENST00000304449 CDK5RAP3Q96JB5 506 aa8.6□□□□□ -1.03
NKRF-201ENST00000304449 ECT2Q9H8V3 914 aa8.6□□□□□ -1.03
NKRF-201ENST00000304449 PIDD1Q9HB75 910 aa8.6□□□□□ -1.03
NKRF-201ENST00000304449 TTC7AQ9ULT0 858 aaPredicted RBP8.6□□□□□ -1.03
NKRF-201ENST00000304449 KRIT1O00522 736 aa8.59□□□□□ -1.03
NKRF-201ENST00000304449 TTI1O43156 1089 aa8.59□□□□□ -1.03
NKRF-201ENST00000304449 AKAP3O75969 853 aa8.59□□□□□ -1.03
NKRF-201ENST00000304449 ANXA13P27216 316 aa8.59□□□□□ -1.03
NKRF-201ENST00000304449 TNNI2P48788 182 aa8.59□□□□□ -1.03
NKRF-201ENST00000304449 SESN3P58005 492 aa8.59□□□□□ -1.03
NKRF-201ENST00000304449 ADAM9Q13443 819 aa8.59□□□□□ -1.03
NKRF-201ENST00000304449 RPS6KA1Q15418 735 aa8.59□□□□□ -1.03
NKRF-201ENST00000304449 NBPF20Q3BBV1 942 aa8.59□□□□□ -1.03
NKRF-201ENST00000304449 TRPM8Q7Z2W7 1104 aa8.59□□□□□ -1.03
NKRF-201ENST00000304449 MAB21L3Q8N8X9 362 aa8.59□□□□□ -1.03
NKRF-201ENST00000304449 FIZ1Q96SL8 496 aa8.59□□□□□ -1.03
NKRF-201ENST00000304449 TRIM51Q9BSJ1 452 aa8.59□□□□□ -1.03
NKRF-201ENST00000304449 GPCPD1Q9NPB8 672 aa8.59□□□□□ -1.03
NKRF-201ENST00000304449 INTS9Q9NV88 658 aaKnown RBP8.59□□□□□ -1.03
NKRF-201ENST00000304449 TBC1D7Q9P0N9 293 aa8.59□□□□□ -1.03
NKRF-201ENST00000304449 UFL1O94874 794 aa8.59□□□□□ -1.03
NKRF-201ENST00000304449 PYGLP06737 847 aa8.59□□□□□ -1.03
NKRF-201ENST00000304449 NPEPPSP55786 919 aa8.59□□□□□ -1.03
NKRF-201ENST00000304449 CACNB1Q02641 598 aaPredicted RBP8.59□□□□□ -1.03
NKRF-201ENST00000304449 KLHL30Q0D2K2 578 aa8.59□□□□□ -1.03
NKRF-201ENST00000304449 USP4Q13107 963 aa8.59□□□□□ -1.03
NKRF-201ENST00000304449 LLGL1Q15334 1064 aa8.59□□□□□ -1.03
NKRF-201ENST00000304449 NFIL3Q16649 462 aa8.59□□□□□ -1.03
NKRF-201ENST00000304449 ANKRD20A2Q5SQ80 823 aa8.59□□□□□ -1.03
NKRF-201ENST00000304449 ANKRD20A1Q5TYW2 823 aa8.59□□□□□ -1.03
NKRF-201ENST00000304449 ANKRD20A3Q5VUR7 823 aa8.59□□□□□ -1.03
NKRF-201ENST00000304449 DAAM2Q86T65 1068 aa8.59□□□□□ -1.03
NKRF-201ENST00000304449 NELFCDQ8IXH7 590 aa8.59□□□□□ -1.03
NKRF-201ENST00000304449 CCDC65Q8IXS2 484 aa8.59□□□□□ -1.03
NKRF-201ENST00000304449 METTL13Q8N6R0 699 aa8.59□□□□□ -1.03
NKRF-201ENST00000304449 SLC35C1Q96A29 364 aa8.59□□□□□ -1.03
NKRF-201ENST00000304449 EPB41L4BQ9H329 900 aa8.59□□□□□ -1.03
NKRF-201ENST00000304449 BATF3Q9NR55 127 aa8.59□□□□□ -1.03
NKRF-201ENST00000304449 HDAC9Q9UKV0 1011 aa8.59□□□□□ -1.03
NKRF-201ENST00000304449 VAV3Q9UKW4 847 aa8.59□□□□□ -1.03
NKRF-201ENST00000304449 PNMA3Q9UL41 463 aa8.59□□□□□ -1.03
NKRF-201ENST00000304449 SUGT1Q9Y2Z0 365 aa8.59□□□□□ -1.03
NKRF-201ENST00000304449 A0A1B0GVG6 124 aa8.58□□□□□ -1.04
NKRF-201ENST00000304449 DDX3XO00571 662 aaKnown RBP eCLIP8.58□□□□□ -1.04
NKRF-201ENST00000304449 DNAJC8O75937 253 aaPredicted RBP8.58□□□□□ -1.04
NKRF-201ENST00000304449 SMNDC1O75940 238 aaKnown RBP eCLIP8.58□□□□□ -1.04
NKRF-201ENST00000304449 KRT16P08779 473 aa8.58□□□□□ -1.04
NKRF-201ENST00000304449 SLURP2P0DP57 97 aa8.58□□□□□ -1.04
NKRF-201ENST00000304449 NEFHP12036 1026 aa8.58□□□□□ -1.04
NKRF-201ENST00000304449 PECAM1P16284 738 aaPredicted RBP8.58□□□□□ -1.04
NKRF-201ENST00000304449 SLC16A2P36021 539 aa8.58□□□□□ -1.04
NKRF-201ENST00000304449 STAT3P40763 770 aa8.58□□□□□ -1.04
NKRF-201ENST00000304449 IFI35P80217 286 aaPredicted RBP8.58□□□□□ -1.04
NKRF-201ENST00000304449 ASIC2Q16515 512 aa8.58□□□□□ -1.04
NKRF-201ENST00000304449 KNOP1Q1ED39 458 aaKnown RBP8.58□□□□□ -1.04
NKRF-201ENST00000304449 GPATCH4Q5T3I0 446 aaKnown RBP8.58□□□□□ -1.04
NKRF-201ENST00000304449 NT5DC3Q86UY8 548 aa8.58□□□□□ -1.04
NKRF-201ENST00000304449 GPBP1Q86WP2 473 aa8.58□□□□□ -1.04
NKRF-201ENST00000304449 CCDC25Q86WR0 208 aa8.58□□□□□ -1.04
NKRF-201ENST00000304449 ANKRD42Q8N9B4 389 aa8.58□□□□□ -1.04
NKRF-201ENST00000304449 PBKQ96KB5 322 aa8.58□□□□□ -1.04
NKRF-201ENST00000304449 KDM4CQ9H3R0 1056 aa8.58□□□□□ -1.04
NKRF-201ENST00000304449 PSTPIP2Q9H939 334 aa8.58□□□□□ -1.04
NKRF-201ENST00000304449 EBF2Q9HAK2 575 aa8.58□□□□□ -1.04
NKRF-201ENST00000304449 PAPOLBQ9NRJ5 636 aaKnown RBP8.58□□□□□ -1.04
NKRF-201ENST00000304449 GGA1Q9UJY5 639 aa8.58□□□□□ -1.04
NKRF-201ENST00000304449 INTUQ9ULD6 942 aa8.58□□□□□ -1.04
NKRF-201ENST00000304449 GTPBP10A4D1E9 387 aaKnown RBP8.58□□□□□ -1.04
NKRF-201ENST00000304449 DPPA5A6NC42 116 aa8.58□□□□□ -1.04
NKRF-201ENST00000304449 USP17L15C9J2P7 530 aa8.58□□□□□ -1.04
NKRF-201ENST00000304449 USP17L13C9JLJ4 530 aa8.58□□□□□ -1.04
NKRF-201ENST00000304449 USP17L11C9JVI0 530 aa8.58□□□□□ -1.04
NKRF-201ENST00000304449 USP17L18D6R9N7 530 aa8.58□□□□□ -1.04
NKRF-201ENST00000304449 USP17L22D6RA61 530 aa8.58□□□□□ -1.04
NKRF-201ENST00000304449 USP17L17D6RBQ6 530 aa8.58□□□□□ -1.04
NKRF-201ENST00000304449 USP17L19D6RCP7 530 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms