RNA–Protein interactions for RNA: ENST00000302528.11

CLIP1-201, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS P4 TSL 5 BASIC

Gene CLIP1, Length 5,833 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-201ENST00000302528 USP19O94966 1318 aa11.05□□□□□ -0.64
CLIP1-201ENST00000302528 CHUKO15111 745 aa11.05□□□□□ -0.64
CLIP1-201ENST00000302528 CDC25BP30305 580 aa11.05□□□□□ -0.64
CLIP1-201ENST00000302528 TSPY1Q01534 308 aa11.05□□□□□ -0.64
CLIP1-201ENST00000302528 MAPRE2Q15555 327 aa11.05□□□□□ -0.64
CLIP1-201ENST00000302528 ZNF555Q8NEP9 628 aa11.05□□□□□ -0.64
CLIP1-201ENST00000302528 THAP11Q96EK4 314 aa11.05□□□□□ -0.64
CLIP1-201ENST00000302528 PLEKHA8Q96JA3 519 aa11.05□□□□□ -0.64
CLIP1-201ENST00000302528 PIDD1Q9HB75 910 aa11.05□□□□□ -0.64
CLIP1-201ENST00000302528 EHD2Q9NZN4 543 aa11.05□□□□□ -0.64
CLIP1-201ENST00000302528 DCTN4Q9UJW0 460 aa11.05□□□□□ -0.64
CLIP1-201ENST00000302528 TARSL2A2RTX5 802 aaKnown RBP11.05□□□□□ -0.64
CLIP1-201ENST00000302528 SLFN12LQ6IEE8 588 aa11.05□□□□□ -0.64
CLIP1-201ENST00000302528 RNF135Q8IUD6 432 aa11.05□□□□□ -0.64
CLIP1-201ENST00000302528 RASGRP4Q8TDF6 673 aa11.05□□□□□ -0.64
CLIP1-201ENST00000302528 INPP5DQ92835 1189 aa11.05□□□□□ -0.64
CLIP1-201ENST00000302528 PARD6BQ9BYG5 372 aa11.05□□□□□ -0.64
CLIP1-201ENST00000302528 ASNSD1Q9NWL6 643 aa11.05□□□□□ -0.64
CLIP1-201ENST00000302528 PYCARDQ9ULZ3 195 aa11.05□□□□□ -0.64
CLIP1-201ENST00000302528 FAM32AQ9Y421 112 aaKnown RBP11.05□□□□□ -0.64
CLIP1-201ENST00000302528 ABCC10Q5T3U5 1492 aa11.05□□□□□ -0.64
CLIP1-201ENST00000302528 LMTK3Q96Q04 1460 aa11.05□□□□□ -0.64
CLIP1-201ENST00000302528 TTLL1O95922 423 aa11.04□□□□□ -0.64
CLIP1-201ENST00000302528 PCP11498 1178 aaKnown RBP11.04□□□□□ -0.64
CLIP1-201ENST00000302528 MAP4P27816 1152 aaKnown RBP11.04□□□□□ -0.64
CLIP1-201ENST00000302528 ARL4DP49703 201 aa11.04□□□□□ -0.64
CLIP1-201ENST00000302528 ARFIP2P53365 341 aa11.04□□□□□ -0.64
CLIP1-201ENST00000302528 ZBED6P86452 979 aa11.04□□□□□ -0.64
CLIP1-201ENST00000302528 RUNX1T1Q06455 604 aa11.04□□□□□ -0.64
CLIP1-201ENST00000302528 RAD51Q06609 339 aa11.04□□□□□ -0.64
CLIP1-201ENST00000302528 LRRC74AQ0VAA2 488 aa11.04□□□□□ -0.64
CLIP1-201ENST00000302528 ARMC2Q8NEN0 867 aa11.04□□□□□ -0.64
CLIP1-201ENST00000302528 OSBPL1AQ9BXW6 950 aa11.04□□□□□ -0.64
CLIP1-201ENST00000302528 SP110Q9HB58 689 aa11.04□□□□□ -0.64
CLIP1-201ENST00000302528 PKD2L2Q9NZM6 624 aa11.04□□□□□ -0.64
CLIP1-201ENST00000302528 H2AFY2Q9P0M6 372 aaPredicted RBP11.04□□□□□ -0.64
CLIP1-201ENST00000302528 K7ERI5 159 aa11.04□□□□□ -0.64
CLIP1-201ENST00000302528 SERPIND1P05546 499 aa11.04□□□□□ -0.64
CLIP1-201ENST00000302528 MARK3P27448 753 aa11.04□□□□□ -0.64
CLIP1-201ENST00000302528 CASP8Q14790 479 aa11.04□□□□□ -0.64
CLIP1-201ENST00000302528 SUPT20HL1Q3ZLR7 823 aa11.04□□□□□ -0.64
CLIP1-201ENST00000302528 MEI1Q5TIA1 1274 aa11.04□□□□□ -0.64
CLIP1-201ENST00000302528 TBC1D9BQ66K14 1250 aa11.04□□□□□ -0.64
CLIP1-201ENST00000302528 POLE3Q9NRF9 147 aa11.04□□□□□ -0.64
CLIP1-201ENST00000302528 CEP170Q5SW79 1584 aa11.04□□□□□ -0.64
CLIP1-201ENST00000302528 PTPN21Q16825 1174 aa11.04□□□□□ -0.64
CLIP1-201ENST00000302528 MFN1Q8IWA4 741 aa11.04□□□□□ -0.64
CLIP1-201ENST00000302528 PPM1NQ8N819 430 aa11.04□□□□□ -0.64
CLIP1-201ENST00000302528 RFWD2Q8NHY2 731 aa11.04□□□□□ -0.64
CLIP1-201ENST00000302528 TBCKQ8TEA7 893 aa11.04□□□□□ -0.64
CLIP1-201ENST00000302528 AFG1LQ8WV93 481 aa11.04□□□□□ -0.64
CLIP1-201ENST00000302528 CACNA2D2Q9NY47 1150 aa11.04□□□□□ -0.64
CLIP1-201ENST00000302528 MTMR6Q9Y217 621 aa11.04□□□□□ -0.64
CLIP1-201ENST00000302528 NPATQ14207 1427 aa11.04□□□□□ -0.64
CLIP1-201ENST00000302528 SOWAHDA6NJG2 315 aa11.04□□□□□ -0.64
CLIP1-201ENST00000302528 PPP6R2O75170 966 aa11.04□□□□□ -0.64
CLIP1-201ENST00000302528 TOMM70O94826 608 aa11.04□□□□□ -0.64
CLIP1-201ENST00000302528 MYL3P08590 195 aa11.04□□□□□ -0.64
CLIP1-201ENST00000302528 AP1B1Q10567 949 aa11.04□□□□□ -0.64
CLIP1-201ENST00000302528 CYTH1Q15438 398 aa11.04□□□□□ -0.64
CLIP1-201ENST00000302528 NBPF9Q3BBW0 867 aa11.04□□□□□ -0.64
CLIP1-201ENST00000302528 FASTKD1Q53R41 847 aaKnown RBP11.04□□□□□ -0.64
CLIP1-201ENST00000302528 MB21D1Q8N884 522 aa11.04□□□□□ -0.64
CLIP1-201ENST00000302528 CNKSR1Q969H4 720 aa11.04□□□□□ -0.64
CLIP1-201ENST00000302528 CYP26B1Q9NR63 512 aa11.04□□□□□ -0.64
CLIP1-201ENST00000302528 SNX24Q9Y343 169 aa11.04□□□□□ -0.64
CLIP1-201ENST00000302528 A0A1W2PQ27 194 aa11.04□□□□□ -0.64
CLIP1-201ENST00000302528 A0A1W2PQ64 194 aa11.04□□□□□ -0.64
CLIP1-201ENST00000302528 A0A1W2PQD8 194 aa11.04□□□□□ -0.64
CLIP1-201ENST00000302528 CDH2P19022 906 aaPredicted RBP11.04□□□□□ -0.64
CLIP1-201ENST00000302528 TRIM71Q2Q1W2 868 aaKnown RBP11.04□□□□□ -0.64
CLIP1-201ENST00000302528 TOGARAM2Q6ZUX3 1019 aa11.04□□□□□ -0.64
CLIP1-201ENST00000302528 CDR2LQ86X02 465 aaPredicted RBP11.04□□□□□ -0.64
CLIP1-201ENST00000302528 GCOM2Q9BZD3 368 aaPredicted RBP11.04□□□□□ -0.64
CLIP1-201ENST00000302528 FOXP1Q9H334 677 aaPredicted RBP11.04□□□□□ -0.64
CLIP1-201ENST00000302528 ADAM22Q9P0K1 906 aa11.04□□□□□ -0.64
CLIP1-201ENST00000302528 DIS3Q9Y2L1 958 aaKnown RBP11.04□□□□□ -0.64
CLIP1-201ENST00000302528 A0A1W2PP64 1363 aa11.04□□□□□ -0.64
CLIP1-201ENST00000302528 F5H423 210 aaPredicted RBP11.03□□□□□ -0.64
CLIP1-201ENST00000302528 ALCAMQ13740 583 aa11.03□□□□□ -0.64
CLIP1-201ENST00000302528 CDC37Q16543 378 aaPredicted RBP11.03□□□□□ -0.64
CLIP1-201ENST00000302528 ZNF394Q53GI3 561 aa11.03□□□□□ -0.64
CLIP1-201ENST00000302528 THNSL1Q8IYQ7 743 aa11.03□□□□□ -0.64
CLIP1-201ENST00000302528 OR6P1Q8NGX9 317 aa11.03□□□□□ -0.64
CLIP1-201ENST00000302528 SH3GL3Q99963 347 aa11.03□□□□□ -0.64
CLIP1-201ENST00000302528 HEMGNQ9BXL5 484 aa11.03□□□□□ -0.64
CLIP1-201ENST00000302528 ZNF556Q9HAH1 456 aa11.03□□□□□ -0.64
CLIP1-201ENST00000302528 ANAPC7Q9UJX3 599 aa11.03□□□□□ -0.64
CLIP1-201ENST00000302528 PRG3Q9Y2Y8 225 aaPredicted RBP11.03□□□□□ -0.64
CLIP1-201ENST00000302528 A0A0D9SFI3 127 aa11.03□□□□□ -0.64
CLIP1-201ENST00000302528 RASSF10A6NK89 507 aa11.03□□□□□ -0.64
CLIP1-201ENST00000302528 CCDC188H7C350 402 aa11.03□□□□□ -0.64
CLIP1-201ENST00000302528 SEMA3EO15041 775 aa11.03□□□□□ -0.64
CLIP1-201ENST00000302528 KRT75O95678 551 aa11.03□□□□□ -0.64
CLIP1-201ENST00000302528 SLC16A2P36021 539 aa11.03□□□□□ -0.64
CLIP1-201ENST00000302528 SF3B3Q15393 1217 aaKnown RBP11.03□□□□□ -0.64
CLIP1-201ENST00000302528 EMBQ6PCB8 327 aa11.03□□□□□ -0.64
CLIP1-201ENST00000302528 TRAF7Q6Q0C0 670 aa11.03□□□□□ -0.64
CLIP1-201ENST00000302528 LUZP2Q86TE4 346 aa11.03□□□□□ -0.64
CLIP1-201ENST00000302528 FLAD1Q8NFF5 587 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms