RNA–Protein interactions for RNA: ENST00000301717.8

SPSB3-201, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB3, Length 1,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-201ENST00000301717 LRRC15Q8TF66 581 aa20.26■□□□□ 0.83
SPSB3-201ENST00000301717 TCP11Q8WWU5 503 aa20.26■□□□□ 0.83
SPSB3-201ENST00000301717 ARNTL2Q8WYA1 636 aa20.26■□□□□ 0.83
SPSB3-201ENST00000301717 ADGRE1Q14246 886 aa20.25■□□□□ 0.83
SPSB3-201ENST00000301717 FAM102BQ5T8I3 360 aa20.25■□□□□ 0.83
SPSB3-201ENST00000301717 USP49Q70CQ1 688 aa20.25■□□□□ 0.83
SPSB3-201ENST00000301717 CRIPAKQ8N1N5 446 aa20.25■□□□□ 0.83
SPSB3-201ENST00000301717 BSNDQ8WZ55 320 aa20.25■□□□□ 0.83
SPSB3-201ENST00000301717 CLIC6Q96NY7 704 aa20.25■□□□□ 0.83
SPSB3-201ENST00000301717 C17orf80Q9BSJ5 609 aa20.25■□□□□ 0.83
SPSB3-201ENST00000301717 RGS18Q9NS28 235 aa20.25■□□□□ 0.83
SPSB3-201ENST00000301717 TFIP11Q9UBB9 837 aaKnown RBP20.25■□□□□ 0.83
SPSB3-201ENST00000301717 INSL6Q9Y581 213 aa20.25■□□□□ 0.83
SPSB3-201ENST00000301717 COL4A6Q14031 1691 aa20.24■□□□□ 0.83
SPSB3-201ENST00000301717 C9IYK1 514 aa20.24■□□□□ 0.83
SPSB3-201ENST00000301717 GAS2O43903 313 aaKnown RBP20.24■□□□□ 0.83
SPSB3-201ENST00000301717 ZSCAN22P10073 491 aaPredicted RBP20.24■□□□□ 0.83
SPSB3-201ENST00000301717 PAN2Q504Q3 1202 aaKnown RBP20.24■□□□□ 0.83
SPSB3-201ENST00000301717 CABP7Q86V35 215 aa20.24■□□□□ 0.83
SPSB3-201ENST00000301717 EXOC8Q8IYI6 725 aa20.24■□□□□ 0.83
SPSB3-201ENST00000301717 ZSCAN16Q9H4T2 348 aaPredicted RBP20.24■□□□□ 0.83
SPSB3-201ENST00000301717 DAXXQ9UER7 740 aaPredicted RBP20.24■□□□□ 0.83
SPSB3-201ENST00000301717 FBXO2Q9UK22 296 aaPredicted RBP20.24■□□□□ 0.83
SPSB3-201ENST00000301717 MYO9BQ13459 2157 aa20.24■□□□□ 0.83
SPSB3-201ENST00000301717 FGFR1P11362 822 aa20.23■□□□□ 0.83
SPSB3-201ENST00000301717 CYP11B2P19099 503 aa20.23■□□□□ 0.83
SPSB3-201ENST00000301717 SARSP49591 514 aaKnown RBP20.23■□□□□ 0.83
SPSB3-201ENST00000301717 TTC3P53804 2025 aa20.23■□□□□ 0.83
SPSB3-201ENST00000301717 LONRF3Q496Y0 759 aa20.23■□□□□ 0.83
SPSB3-201ENST00000301717 CATSPER4Q7RTX7 472 aa20.23■□□□□ 0.83
SPSB3-201ENST00000301717 NPAS4Q8IUM7 802 aa20.23■□□□□ 0.83
SPSB3-201ENST00000301717 SP7Q8TDD2 431 aaPredicted RBP20.23■□□□□ 0.83
SPSB3-201ENST00000301717 CHAMP1Q96JM3 812 aa20.23■□□□□ 0.83
SPSB3-201ENST00000301717 RUSC1Q9BVN2 902 aa20.23■□□□□ 0.83
SPSB3-201ENST00000301717 CSRNP2Q9H175 543 aa20.23■□□□□ 0.83
SPSB3-201ENST00000301717 RC3H2Q9HBD1 1191 aaKnown RBP20.23■□□□□ 0.83
SPSB3-201ENST00000301717 PIN4Q9Y237 131 aaKnown RBP20.23■□□□□ 0.83
SPSB3-201ENST00000301717 DGKIO75912 1065 aa20.22■□□□□ 0.83
SPSB3-201ENST00000301717 EYA4O95677 639 aa20.22■□□□□ 0.83
SPSB3-201ENST00000301717 BMP15O95972 392 aa20.22■□□□□ 0.83
SPSB3-201ENST00000301717 F13A1P00488 732 aa20.22■□□□□ 0.83
SPSB3-201ENST00000301717 SSBP05455 408 aaKnown RBP eCLIP20.22■□□□□ 0.83
SPSB3-201ENST00000301717 MUTP22033 750 aa20.22■□□□□ 0.83
SPSB3-201ENST00000301717 CDC42EP1Q00587 391 aa20.22■□□□□ 0.83
SPSB3-201ENST00000301717 KARSQ15046 597 aaKnown RBP20.22■□□□□ 0.83
SPSB3-201ENST00000301717 ODR4Q5SWX8 454 aa20.22■□□□□ 0.83
SPSB3-201ENST00000301717 SLC24A5Q71RS6 500 aa20.22■□□□□ 0.83
SPSB3-201ENST00000301717 ZNF710Q8N1W2 664 aa20.22■□□□□ 0.83
SPSB3-201ENST00000301717 EPSTI1Q96J88 318 aa20.22■□□□□ 0.83
SPSB3-201ENST00000301717 HCSTQ9UBK5 93 aa20.22■□□□□ 0.83
SPSB3-201ENST00000301717 DNM3Q9UQ16 869 aa20.22■□□□□ 0.83
SPSB3-201ENST00000301717 FOSL2P15408 326 aa20.21■□□□□ 0.83
SPSB3-201ENST00000301717 ZSCAN20P17040 1043 aaPredicted RBP20.21■□□□□ 0.83
SPSB3-201ENST00000301717 SFPQP23246 707 aaKnown RBP eCLIP20.21■□□□□ 0.83
SPSB3-201ENST00000301717 RAD51AP2Q09MP3 1159 aa20.21■□□□□ 0.83
SPSB3-201ENST00000301717 MXD4Q14582 209 aaPredicted RBP20.21■□□□□ 0.83
SPSB3-201ENST00000301717 TMEM119Q4V9L6 283 aa20.21■□□□□ 0.83
SPSB3-201ENST00000301717 HYIQ5T013 277 aa20.21■□□□□ 0.83
SPSB3-201ENST00000301717 RNF169Q8NCN4 708 aa20.21■□□□□ 0.83
SPSB3-201ENST00000301717 GDPD5Q8WTR4 605 aa20.21■□□□□ 0.83
SPSB3-201ENST00000301717 ZNF689Q96CS4 500 aaPredicted RBP20.21■□□□□ 0.83
SPSB3-201ENST00000301717 KIFC3Q9BVG8 833 aa20.21■□□□□ 0.83
SPSB3-201ENST00000301717 LRFN2Q9ULH4 789 aa20.21■□□□□ 0.83
SPSB3-201ENST00000301717 STK24Q9Y6E0 443 aa20.21■□□□□ 0.83
SPSB3-201ENST00000301717 ADGRA3Q8IWK6 1321 aa20.21■□□□□ 0.83
SPSB3-201ENST00000301717 PRUNE2Q8WUY3 3088 aa20.2■□□□□ 0.82
SPSB3-201ENST00000301717 LRRIQ4A6NIV6 560 aa20.2■□□□□ 0.82
SPSB3-201ENST00000301717 INO80B-WBP1J3KQ70 363 aa20.2■□□□□ 0.82
SPSB3-201ENST00000301717 ASAP2O43150 1006 aa20.2■□□□□ 0.82
SPSB3-201ENST00000301717 PHKA2P46019 1235 aa20.2■□□□□ 0.82
SPSB3-201ENST00000301717 PTENP60484 403 aa20.2■□□□□ 0.82
SPSB3-201ENST00000301717 MBTD1Q05BQ5 628 aa20.2■□□□□ 0.82
SPSB3-201ENST00000301717 MCPH1Q8NEM0 835 aa20.2■□□□□ 0.82
SPSB3-201ENST00000301717 CDK5RAP3Q96JB5 506 aa20.2■□□□□ 0.82
SPSB3-201ENST00000301717 INO80BQ9C086 356 aaPredicted RBP20.2■□□□□ 0.82
SPSB3-201ENST00000301717 C1orf112Q9NSG2 853 aa20.2■□□□□ 0.82
SPSB3-201ENST00000301717 USP20Q9Y2K6 914 aa20.2■□□□□ 0.82
SPSB3-201ENST00000301717 PCDHB7Q9Y5E2 793 aa20.2■□□□□ 0.82
SPSB3-201ENST00000301717 TRANK1O15050 2925 aa20.2■□□□□ 0.82
SPSB3-201ENST00000301717 NPHP3-ACAD11A0A0J9YXS1 232 aa20.19■□□□□ 0.82
SPSB3-201ENST00000301717 B4GALT5O43286 388 aa20.19■□□□□ 0.82
SPSB3-201ENST00000301717 LINC00271P0C7V0 271 aa20.19■□□□□ 0.82
SPSB3-201ENST00000301717 ATF7P17544 494 aaPredicted RBP20.19■□□□□ 0.82
SPSB3-201ENST00000301717 IGFBP4P22692 258 aa20.19■□□□□ 0.82
SPSB3-201ENST00000301717 LONP1P36776 959 aaKnown RBP20.19■□□□□ 0.82
SPSB3-201ENST00000301717 UBA7P41226 1012 aa20.19■□□□□ 0.82
SPSB3-201ENST00000301717 FAM189BP81408 668 aa20.19■□□□□ 0.82
SPSB3-201ENST00000301717 CACNB1Q02641 598 aaPredicted RBP20.19■□□□□ 0.82
SPSB3-201ENST00000301717 BTG3Q14201 252 aaPredicted RBP20.19■□□□□ 0.82
SPSB3-201ENST00000301717 SLC39A14Q15043 492 aa20.19■□□□□ 0.82
SPSB3-201ENST00000301717 TWF2Q6IBS0 349 aaKnown RBP20.19■□□□□ 0.82
SPSB3-201ENST00000301717 SRGAP1Q7Z6B7 1085 aa20.19■□□□□ 0.82
SPSB3-201ENST00000301717 ECHDC2Q86YB7 292 aa20.19■□□□□ 0.82
SPSB3-201ENST00000301717 DAW1Q8N136 415 aa20.19■□□□□ 0.82
SPSB3-201ENST00000301717 CPB2Q96IY4 423 aa20.19■□□□□ 0.82
SPSB3-201ENST00000301717 AK8Q96MA6 479 aa20.19■□□□□ 0.82
SPSB3-201ENST00000301717 TGS1Q96RS0 853 aaKnown RBP20.19■□□□□ 0.82
SPSB3-201ENST00000301717 AGPAT5Q9NUQ2 364 aa20.19■□□□□ 0.82
SPSB3-201ENST00000301717 RNF19AQ9NV58 838 aa20.19■□□□□ 0.82
SPSB3-201ENST00000301717 STXBP5LQ9Y2K9 1186 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms