RNA–Protein interactions for RNA: ENST00000299267.8

GABRB3-201, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 1 (best) BASIC

Gene GABRB3, Length 4,494 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-201ENST00000299267 GNAT1P11488 350 aa10.99□□□□□ -0.65
GABRB3-201ENST00000299267 DYNLT1P63172 113 aa10.99□□□□□ -0.65
GABRB3-201ENST00000299267 ZNF699Q32M78 642 aa10.99□□□□□ -0.65
GABRB3-201ENST00000299267 WDR72Q3MJ13 1102 aa10.99□□□□□ -0.65
GABRB3-201ENST00000299267 TATDN1Q6P1N9 297 aa10.99□□□□□ -0.65
GABRB3-201ENST00000299267 USP50Q70EL3 339 aaPredicted RBP10.99□□□□□ -0.65
GABRB3-201ENST00000299267 SYT2Q8N9I0 419 aaPredicted RBP10.99□□□□□ -0.65
GABRB3-201ENST00000299267 PTPN22Q9Y2R2 807 aa10.99□□□□□ -0.65
GABRB3-201ENST00000299267 AFDNP55196 1824 aaKnown RBP10.99□□□□□ -0.65
GABRB3-201ENST00000299267 PDXKO00764 312 aa10.99□□□□□ -0.65
GABRB3-201ENST00000299267 SRGAP2O75044 1071 aa10.99□□□□□ -0.65
GABRB3-201ENST00000299267 PLS3P13797 630 aa10.99□□□□□ -0.65
GABRB3-201ENST00000299267 POLR2BP30876 1174 aaKnown RBP10.99□□□□□ -0.65
GABRB3-201ENST00000299267 MYO1EQ12965 1108 aa10.99□□□□□ -0.65
GABRB3-201ENST00000299267 SNX1Q13596 522 aa10.99□□□□□ -0.65
GABRB3-201ENST00000299267 TREML2Q5T2D2 321 aa10.99□□□□□ -0.65
GABRB3-201ENST00000299267 CFAP58Q5T655 872 aa10.99□□□□□ -0.65
GABRB3-201ENST00000299267 SND1Q7KZF4 910 aaKnown RBP eCLIP10.99□□□□□ -0.65
GABRB3-201ENST00000299267 PLEKHH3Q7Z736 793 aa10.99□□□□□ -0.65
GABRB3-201ENST00000299267 CEP57Q86XR8 500 aa10.99□□□□□ -0.65
GABRB3-201ENST00000299267 NAP1L3Q99457 506 aaPredicted RBP10.99□□□□□ -0.65
GABRB3-201ENST00000299267 SLC38A10Q9HBR0 1119 aa10.99□□□□□ -0.65
GABRB3-201ENST00000299267 RIPK3Q9Y572 518 aa10.99□□□□□ -0.65
GABRB3-201ENST00000299267 BZW2Q9Y6E2 419 aaKnown RBP10.99□□□□□ -0.65
GABRB3-201ENST00000299267 ATP2A1O14983 1001 aa10.99□□□□□ -0.65
GABRB3-201ENST00000299267 LDHAP00338 332 aaKnown RBP10.99□□□□□ -0.65
GABRB3-201ENST00000299267 ZNF286BP0CG31 522 aa10.99□□□□□ -0.65
GABRB3-201ENST00000299267 CYP2C9P11712 490 aa10.99□□□□□ -0.65
GABRB3-201ENST00000299267 FUT2Q10981 343 aa10.99□□□□□ -0.65
GABRB3-201ENST00000299267 EPC2Q52LR7 807 aa10.99□□□□□ -0.65
GABRB3-201ENST00000299267 PRAMEF19Q5SWL8 479 aa10.99□□□□□ -0.65
GABRB3-201ENST00000299267 COPS5Q92905 334 aa10.99□□□□□ -0.65
GABRB3-201ENST00000299267 BPIFA3Q9BQP9 254 aa10.99□□□□□ -0.65
GABRB3-201ENST00000299267 GCOM2Q9BZD3 368 aaPredicted RBP10.99□□□□□ -0.65
GABRB3-201ENST00000299267 MTRF1LQ9UGC7 380 aaKnown RBP10.99□□□□□ -0.65
GABRB3-201ENST00000299267 TFR2Q9UP52 801 aa10.99□□□□□ -0.65
GABRB3-201ENST00000299267 CXCL11O14625 94 aa10.98□□□□□ -0.65
GABRB3-201ENST00000299267 PPP1R11O60927 126 aaPredicted RBP10.98□□□□□ -0.65
GABRB3-201ENST00000299267 ADORA2AP29274 412 aa10.98□□□□□ -0.65
GABRB3-201ENST00000299267 CYP2C19P33261 490 aa10.98□□□□□ -0.65
GABRB3-201ENST00000299267 KRT39Q6A163 491 aa10.98□□□□□ -0.65
GABRB3-201ENST00000299267 GJB7Q6PEY0 223 aa10.98□□□□□ -0.65
GABRB3-201ENST00000299267 MYRIPQ8NFW9 859 aa10.98□□□□□ -0.65
GABRB3-201ENST00000299267 KIF12Q96FN5 646 aa10.98□□□□□ -0.65
GABRB3-201ENST00000299267 C11orf70Q9BRQ4 267 aa10.98□□□□□ -0.65
GABRB3-201ENST00000299267 FAM204AQ9H8W3 233 aa10.98□□□□□ -0.65
GABRB3-201ENST00000299267 PDE11AQ9HCR9 933 aa10.98□□□□□ -0.65
GABRB3-201ENST00000299267 PRDM5Q9NQX1 630 aaPredicted RBP10.98□□□□□ -0.65
GABRB3-201ENST00000299267 KBTBD4Q9NVX7 518 aa10.98□□□□□ -0.65
GABRB3-201ENST00000299267 ERAP1Q9NZ08 941 aa10.98□□□□□ -0.65
GABRB3-201ENST00000299267 PPP2R3BQ9Y5P8 575 aa10.98□□□□□ -0.65
GABRB3-201ENST00000299267 ZNF18P17022 549 aa10.98□□□□□ -0.65
GABRB3-201ENST00000299267 TMEM132BQ14DG7 1078 aa10.98□□□□□ -0.65
GABRB3-201ENST00000299267 KIZQ2M2Z5 673 aa10.98□□□□□ -0.65
GABRB3-201ENST00000299267 KCNV1Q6PIU1 500 aa10.98□□□□□ -0.65
GABRB3-201ENST00000299267 SMAP1Q8IYB5 467 aaPredicted RBP10.98□□□□□ -0.65
GABRB3-201ENST00000299267 GPD1LQ8N335 351 aa10.98□□□□□ -0.65
GABRB3-201ENST00000299267 GPRASP2Q96D09 838 aa10.98□□□□□ -0.65
GABRB3-201ENST00000299267 PANX2Q96RD6 677 aa10.98□□□□□ -0.65
GABRB3-201ENST00000299267 INTS2Q9H0H0 1204 aaKnown RBP10.98□□□□□ -0.65
GABRB3-201ENST00000299267 NMRK2Q9NPI5 230 aa10.98□□□□□ -0.65
GABRB3-201ENST00000299267 GINM1Q9NU53 330 aa10.98□□□□□ -0.65
GABRB3-201ENST00000299267 CHORDC1Q9UHD1 332 aaPredicted RBP10.98□□□□□ -0.65
GABRB3-201ENST00000299267 UTP11Q9Y3A2 253 aaKnown RBP10.98□□□□□ -0.65
GABRB3-201ENST00000299267 MAFGO15525 162 aa10.98□□□□□ -0.65
GABRB3-201ENST00000299267 UPP2O95045 317 aa10.98□□□□□ -0.65
GABRB3-201ENST00000299267 VTNP04004 478 aa10.98□□□□□ -0.65
GABRB3-201ENST00000299267 HPDP32754 393 aaPredicted RBP10.98□□□□□ -0.65
GABRB3-201ENST00000299267 GPC3P51654 580 aa10.98□□□□□ -0.65
GABRB3-201ENST00000299267 KRT81Q14533 505 aa10.98□□□□□ -0.65
GABRB3-201ENST00000299267 SNRNP35Q16560 246 aaKnown RBP10.98□□□□□ -0.65
GABRB3-201ENST00000299267 GLIS3Q8NEA6 775 aa10.98□□□□□ -0.65
GABRB3-201ENST00000299267 BBXQ8WY36 941 aaPredicted RBP10.98□□□□□ -0.65
GABRB3-201ENST00000299267 CBWD1Q9BRT8 395 aa10.98□□□□□ -0.65
GABRB3-201ENST00000299267 CYP26B1Q9NR63 512 aa10.98□□□□□ -0.65
GABRB3-201ENST00000299267 PACSIN2Q9UNF0 486 aaPredicted RBP10.98□□□□□ -0.65
GABRB3-201ENST00000299267 CYP26A1O43174 497 aa10.98□□□□□ -0.65
GABRB3-201ENST00000299267 ATP2C2O75185 946 aa10.98□□□□□ -0.65
GABRB3-201ENST00000299267 OATP04181 439 aa10.98□□□□□ -0.65
GABRB3-201ENST00000299267 PMS1P54277 932 aaKnown RBP10.98□□□□□ -0.65
GABRB3-201ENST00000299267 SNX16P57768 344 aa10.98□□□□□ -0.65
GABRB3-201ENST00000299267 PPATQ06203 517 aa10.98□□□□□ -0.65
GABRB3-201ENST00000299267 PRPF31Q8WWY3 499 aaKnown RBP10.98□□□□□ -0.65
GABRB3-201ENST00000299267 PNMA5Q96PV4 448 aa10.98□□□□□ -0.65
GABRB3-201ENST00000299267 SELENOSQ9BQE4 189 aa10.98□□□□□ -0.65
GABRB3-201ENST00000299267 TOPORSQ9NS56 1045 aaPredicted RBP10.98□□□□□ -0.65
GABRB3-201ENST00000299267 ODF2LQ9ULJ1 636 aa10.98□□□□□ -0.65
GABRB3-201ENST00000299267 GLTPD2A6NH11 291 aa10.97□□□□□ -0.65
GABRB3-201ENST00000299267 KRT12Q99456 494 aa10.97□□□□□ -0.65
GABRB3-201ENST00000299267 AGO4Q9HCK5 861 aaKnown RBP10.97□□□□□ -0.65
GABRB3-201ENST00000299267 NGRNQ9NPE2 291 aaKnown RBP10.97□□□□□ -0.65
GABRB3-201ENST00000299267 VPS18Q9P253 973 aa10.97□□□□□ -0.65
GABRB3-201ENST00000299267 ZBBXA8MT70 800 aa10.97□□□□□ -0.65
GABRB3-201ENST00000299267 ATP9AO75110 1047 aa10.97□□□□□ -0.65
GABRB3-201ENST00000299267 SLITRK3O94933 977 aa10.97□□□□□ -0.65
GABRB3-201ENST00000299267 GIT2Q14161 759 aa10.97□□□□□ -0.65
GABRB3-201ENST00000299267 GLRA4Q5JXX5 417 aa10.97□□□□□ -0.65
GABRB3-201ENST00000299267 CASC4Q6P4E1 433 aa10.97□□□□□ -0.65
GABRB3-201ENST00000299267 OTOP1Q7RTM1 612 aa10.97□□□□□ -0.65
GABRB3-201ENST00000299267 POP1Q99575 1024 aaKnown RBP10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms