RNA–Protein interactions for RNA: ENST00000298966.6

SMCO4-201, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO4, Length 1,104 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-201ENST00000298966 ASIC4Q96FT7 647 aa23.51■■□□□ 1.35
SMCO4-201ENST00000298966 PADI3Q9ULW8 664 aa23.51■■□□□ 1.35
SMCO4-201ENST00000298966 PCDHB12Q9Y5F1 795 aa23.51■■□□□ 1.35
SMCO4-201ENST00000298966 PCDHGC5Q9Y5F6 944 aa23.51■■□□□ 1.35
SMCO4-201ENST00000298966 FAM237AA0A1B0GTK4 181 aa23.5■■□□□ 1.35
SMCO4-201ENST00000298966 ADAMTS3O15072 1205 aa23.5■■□□□ 1.35
SMCO4-201ENST00000298966 ATP9AO75110 1047 aa23.5■■□□□ 1.35
SMCO4-201ENST00000298966 KCNA2P16389 499 aa23.5■■□□□ 1.35
SMCO4-201ENST00000298966 ZNF445P59923 1031 aa23.5■■□□□ 1.35
SMCO4-201ENST00000298966 PTGDRQ13258 359 aa23.5■■□□□ 1.35
SMCO4-201ENST00000298966 ZNF174Q15697 407 aa23.5■■□□□ 1.35
SMCO4-201ENST00000298966 UBE2SQ16763 222 aa23.5■■□□□ 1.35
SMCO4-201ENST00000298966 PTPN21Q16825 1174 aa23.5■■□□□ 1.35
SMCO4-201ENST00000298966 ZSCAN23Q3MJ62 389 aa23.5■■□□□ 1.35
SMCO4-201ENST00000298966 SPOUT1Q5T280 376 aaKnown RBP23.5■■□□□ 1.35
SMCO4-201ENST00000298966 CCDC183Q5T5S1 534 aa23.5■■□□□ 1.35
SMCO4-201ENST00000298966 CDCA3Q99618 268 aaPredicted RBP23.5■■□□□ 1.35
SMCO4-201ENST00000298966 AAASQ9NRG9 546 aa23.5■■□□□ 1.35
SMCO4-201ENST00000298966 TMEM260Q9NX78 707 aa23.5■■□□□ 1.35
SMCO4-201ENST00000298966 FBXO2Q9UK22 296 aaPredicted RBP23.5■■□□□ 1.35
SMCO4-201ENST00000298966 PER2O15055 1255 aa23.49■■□□□ 1.35
SMCO4-201ENST00000298966 SRGAP2BP0DMP2 458 aa23.49■■□□□ 1.35
SMCO4-201ENST00000298966 INSRRP14616 1297 aa23.49■■□□□ 1.35
SMCO4-201ENST00000298966 IBSPP21815 317 aaPredicted RBP23.49■■□□□ 1.35
SMCO4-201ENST00000298966 MARCKSP29966 332 aaPredicted RBP23.49■■□□□ 1.35
SMCO4-201ENST00000298966 SREBF1P36956 1147 aa23.49■■□□□ 1.35
SMCO4-201ENST00000298966 GATMP50440 423 aa23.49■■□□□ 1.35
SMCO4-201ENST00000298966 FAM160A1Q05DH4 1040 aa23.49■■□□□ 1.35
SMCO4-201ENST00000298966 LETM2Q2VYF4 491 aa23.49■■□□□ 1.35
SMCO4-201ENST00000298966 ZBTB33Q86T24 672 aa23.49■■□□□ 1.35
SMCO4-201ENST00000298966 ATP8B4Q8TF62 1192 aa23.49■■□□□ 1.35
SMCO4-201ENST00000298966 SUSD6Q92537 303 aa23.49■■□□□ 1.35
SMCO4-201ENST00000298966 TLR9Q9NR96 1032 aa23.49■■□□□ 1.35
SMCO4-201ENST00000298966 CFAP54Q96N23 3096 aa23.49■■□□□ 1.35
SMCO4-201ENST00000298966 NEMFO60524 1076 aa23.48■■□□□ 1.35
SMCO4-201ENST00000298966 MCM7P33993 719 aa23.48■■□□□ 1.35
SMCO4-201ENST00000298966 TMEM62Q0P6H9 643 aa23.48■■□□□ 1.35
SMCO4-201ENST00000298966 DUSP6Q16828 381 aa23.48■■□□□ 1.35
SMCO4-201ENST00000298966 FSIP1Q8NA03 581 aa23.48■■□□□ 1.35
SMCO4-201ENST00000298966 ZBTB10Q96DT7 871 aa23.48■■□□□ 1.35
SMCO4-201ENST00000298966 PYM1Q9BRP8 204 aaKnown RBP23.48■■□□□ 1.35
SMCO4-201ENST00000298966 FAM13BQ9NYF5 915 aa23.48■■□□□ 1.35
SMCO4-201ENST00000298966 PKD2L1Q9P0L9 805 aa23.48■■□□□ 1.35
SMCO4-201ENST00000298966 IGSF9BQ9UPX0 1349 aa23.48■■□□□ 1.35
SMCO4-201ENST00000298966 RIF1Q5UIP0 2472 aaKnown RBP23.47■■□□□ 1.35
SMCO4-201ENST00000298966 CYP3A7-CYP3A51PA0A087WV96 503 aa23.47■■□□□ 1.35
SMCO4-201ENST00000298966 CCNT1O60563 726 aaKnown RBP23.47■■□□□ 1.35
SMCO4-201ENST00000298966 CYP3A4P08684 503 aa23.47■■□□□ 1.35
SMCO4-201ENST00000298966 LIG1P18858 919 aa23.47■■□□□ 1.35
SMCO4-201ENST00000298966 CYP3A7P24462 503 aa23.47■■□□□ 1.35
SMCO4-201ENST00000298966 SARSP49591 514 aaKnown RBP23.47■■□□□ 1.35
SMCO4-201ENST00000298966 NUBP1P53384 320 aa23.47■■□□□ 1.35
SMCO4-201ENST00000298966 FOXK2Q01167 660 aa23.47■■□□□ 1.35
SMCO4-201ENST00000298966 RESP18Q5W5W9 173 aa23.47■■□□□ 1.35
SMCO4-201ENST00000298966 CELF4Q9BZC1 486 aaKnown RBP23.47■■□□□ 1.35
SMCO4-201ENST00000298966 AZI2Q9H6S1 392 aa23.47■■□□□ 1.35
SMCO4-201ENST00000298966 RNF216Q9NWF9 866 aaPredicted RBP23.47■■□□□ 1.35
SMCO4-201ENST00000298966 PCDHB7Q9Y5E2 793 aa23.47■■□□□ 1.35
SMCO4-201ENST00000298966 FNDC1Q4ZHG4 1894 aaPredicted RBP23.47■■□□□ 1.35
SMCO4-201ENST00000298966 OR52Z1P0C646 297 aa23.46■■□□□ 1.35
SMCO4-201ENST00000298966 LONP1P36776 959 aaKnown RBP23.46■■□□□ 1.35
SMCO4-201ENST00000298966 RBM10P98175 930 aaKnown RBP23.46■■□□□ 1.35
SMCO4-201ENST00000298966 MTMR1Q13613 665 aa23.46■■□□□ 1.35
SMCO4-201ENST00000298966 PDE12Q6L8Q7 609 aaKnown RBP23.46■■□□□ 1.35
SMCO4-201ENST00000298966 C4orf32Q8N8J7 132 aa23.46■■□□□ 1.35
SMCO4-201ENST00000298966 CRYGNQ8WXF5 182 aa23.46■■□□□ 1.35
SMCO4-201ENST00000298966 MBOAT7Q96N66 472 aa23.46■■□□□ 1.35
SMCO4-201ENST00000298966 TRPC6Q9Y210 931 aa23.46■■□□□ 1.35
SMCO4-201ENST00000298966 PCDHA2Q9Y5H9 948 aa23.46■■□□□ 1.35
SMCO4-201ENST00000298966 H0Y858 1186 aa23.45■■□□□ 1.34
SMCO4-201ENST00000298966 KINO60870 393 aaKnown RBP23.45■■□□□ 1.34
SMCO4-201ENST00000298966 ITGB5P18084 799 aa23.45■■□□□ 1.34
SMCO4-201ENST00000298966 CIITAP33076 1130 aa23.45■■□□□ 1.34
SMCO4-201ENST00000298966 DTHD1Q6ZMT9 781 aa23.45■■□□□ 1.34
SMCO4-201ENST00000298966 FAM43BQ6ZT52 329 aaPredicted RBP23.45■■□□□ 1.34
SMCO4-201ENST00000298966 THNSL1Q8IYQ7 743 aa23.45■■□□□ 1.34
SMCO4-201ENST00000298966 VN1R2Q8NFZ6 395 aa23.45■■□□□ 1.34
SMCO4-201ENST00000298966 AK8Q96MA6 479 aa23.45■■□□□ 1.34
SMCO4-201ENST00000298966 TIGD1Q96MW7 591 aa23.45■■□□□ 1.34
SMCO4-201ENST00000298966 PLXNA3P51805 1871 aa23.45■■□□□ 1.34
SMCO4-201ENST00000298966 FAM186AA6NE01 2351 aa23.44■■□□□ 1.34
SMCO4-201ENST00000298966 KDM3AQ9Y4C1 1321 aa23.44■■□□□ 1.34
SMCO4-201ENST00000298966 TBX3O15119 743 aa23.44■■□□□ 1.34
SMCO4-201ENST00000298966 FGF18O76093 207 aa23.44■■□□□ 1.34
SMCO4-201ENST00000298966 KRT76Q01546 638 aa23.44■■□□□ 1.34
SMCO4-201ENST00000298966 NFX1Q12986 1120 aaKnown RBP23.44■■□□□ 1.34
SMCO4-201ENST00000298966 NME8Q8N427 588 aa23.44■■□□□ 1.34
SMCO4-201ENST00000298966 ENGASEQ8NFI3 743 aa23.44■■□□□ 1.34
SMCO4-201ENST00000298966 CCDC34Q96HJ3 373 aa23.44■■□□□ 1.34
SMCO4-201ENST00000298966 RIPOR3Q96MK2 946 aa23.44■■□□□ 1.34
SMCO4-201ENST00000298966 RAB34Q9BZG1 259 aa23.44■■□□□ 1.34
SMCO4-201ENST00000298966 NUP62CLQ9H1M0 184 aa23.44■■□□□ 1.34
SMCO4-201ENST00000298966 TMX1Q9H3N1 280 aa23.44■■□□□ 1.34
SMCO4-201ENST00000298966 HPSEQ9Y251 543 aa23.44■■□□□ 1.34
SMCO4-201ENST00000298966 UBIAD1Q9Y5Z9 338 aa23.44■■□□□ 1.34
SMCO4-201ENST00000298966 TBKBP1A7MCY6 615 aa23.43■■□□□ 1.34
SMCO4-201ENST00000298966 WNT7AO00755 349 aa23.43■■□□□ 1.34
SMCO4-201ENST00000298966 MAFGO15525 162 aa23.43■■□□□ 1.34
SMCO4-201ENST00000298966 TECP42680 631 aa23.43■■□□□ 1.34
SMCO4-201ENST00000298966 ERVFC1P60507 584 aa23.43■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms