RNA–Protein interactions for RNA: ENST00000296503.9

HMGB2-201, Transcript of high mobility group box 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB2, Length 1,889 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-201ENST00000296503 MICAL3Q7RTP6 2002 aa13.44□□□□□ -0.26
HMGB2-201ENST00000296503 ARHGEF35A5YM69 484 aa13.43□□□□□ -0.26
HMGB2-201ENST00000296503 FGFR4P22455 802 aa13.43□□□□□ -0.26
HMGB2-201ENST00000296503 LAMTOR4Q0VGL1 99 aa13.43□□□□□ -0.26
HMGB2-201ENST00000296503 GRIN2CQ14957 1233 aa13.43□□□□□ -0.26
HMGB2-201ENST00000296503 YME1L1Q96TA2 773 aa13.43□□□□□ -0.26
HMGB2-201ENST00000296503 DNM3Q9UQ16 869 aa13.43□□□□□ -0.26
HMGB2-201ENST00000296503 CLIC4Q9Y696 253 aa13.43□□□□□ -0.26
HMGB2-201ENST00000296503 SZT2Q5T011 3432 aa13.43□□□□□ -0.26
HMGB2-201ENST00000296503 GBF1Q92538 1859 aa13.42□□□□□ -0.26
HMGB2-201ENST00000296503 MXD4Q14582 209 aaPredicted RBP13.42□□□□□ -0.26
HMGB2-201ENST00000296503 FAM43BQ6ZT52 329 aaPredicted RBP13.42□□□□□ -0.26
HMGB2-201ENST00000296503 LINC01599Q8WXQ3 324 aa13.42□□□□□ -0.26
HMGB2-201ENST00000296503 CDK5RAP3Q96JB5 506 aa13.42□□□□□ -0.26
HMGB2-201ENST00000296503 CDX2Q99626 313 aaPredicted RBP13.42□□□□□ -0.26
HMGB2-201ENST00000296503 GZF1Q9H116 711 aaPredicted RBP13.42□□□□□ -0.26
HMGB2-201ENST00000296503 TSPYL2Q9H2G4 693 aaPredicted RBP13.42□□□□□ -0.26
HMGB2-201ENST00000296503 CERS4Q9HA82 394 aa13.42□□□□□ -0.26
HMGB2-201ENST00000296503 XPNPEP1Q9NQW7 623 aa13.42□□□□□ -0.26
HMGB2-201ENST00000296503 LRFN2Q9ULH4 789 aa13.42□□□□□ -0.26
HMGB2-201ENST00000296503 MYO9BQ13459 2157 aa13.42□□□□□ -0.26
HMGB2-201ENST00000296503 LCHNA4D1U4 455 aa13.42□□□□□ -0.26
HMGB2-201ENST00000296503 E9PMD0 336 aa13.42□□□□□ -0.26
HMGB2-201ENST00000296503 MGEA5O60502 916 aa13.42□□□□□ -0.26
HMGB2-201ENST00000296503 STAG3L1P0CL83 205 aa13.42□□□□□ -0.26
HMGB2-201ENST00000296503 PADI6Q6TGC4 694 aa13.42□□□□□ -0.26
HMGB2-201ENST00000296503 RNF149Q8NC42 400 aa13.42□□□□□ -0.26
HMGB2-201ENST00000296503 PLIN2Q99541 437 aa13.42□□□□□ -0.26
HMGB2-201ENST00000296503 BHMT2Q9H2M3 363 aa13.42□□□□□ -0.26
HMGB2-201ENST00000296503 RGS18Q9NS28 235 aa13.42□□□□□ -0.26
HMGB2-201ENST00000296503 PCDHB7Q9Y5E2 793 aa13.42□□□□□ -0.26
HMGB2-201ENST00000296503 SFPQP23246 707 aaKnown RBP eCLIP13.41□□□□□ -0.26
HMGB2-201ENST00000296503 MARCKSP29966 332 aaPredicted RBP13.41□□□□□ -0.26
HMGB2-201ENST00000296503 UBA7P41226 1012 aa13.41□□□□□ -0.26
HMGB2-201ENST00000296503 HTRA4P83105 476 aaPredicted RBP13.41□□□□□ -0.26
HMGB2-201ENST00000296503 TAP1Q03518 808 aa13.41□□□□□ -0.26
HMGB2-201ENST00000296503 TFDP1Q14186 410 aa13.41□□□□□ -0.26
HMGB2-201ENST00000296503 KLHL40Q2TBA0 621 aa13.41□□□□□ -0.26
HMGB2-201ENST00000296503 FAM102BQ5T8I3 360 aa13.41□□□□□ -0.26
HMGB2-201ENST00000296503 SLC24A5Q71RS6 500 aa13.41□□□□□ -0.26
HMGB2-201ENST00000296503 CATSPER4Q7RTX7 472 aa13.41□□□□□ -0.26
HMGB2-201ENST00000296503 MCPH1Q8NEM0 835 aa13.41□□□□□ -0.26
HMGB2-201ENST00000296503 ANP32BQ92688 251 aaKnown RBP13.41□□□□□ -0.26
HMGB2-201ENST00000296503 AK8Q96MA6 479 aa13.41□□□□□ -0.26
HMGB2-201ENST00000296503 GUCD1Q96NT3 240 aa13.41□□□□□ -0.26
HMGB2-201ENST00000296503 MMTAG2Q9BU76 263 aaKnown RBP13.41□□□□□ -0.26
HMGB2-201ENST00000296503 PRDM12Q9H4Q4 367 aa13.41□□□□□ -0.26
HMGB2-201ENST00000296503 C1orf112Q9NSG2 853 aa13.41□□□□□ -0.26
HMGB2-201ENST00000296503 RNF216Q9NWF9 866 aaPredicted RBP13.41□□□□□ -0.26
HMGB2-201ENST00000296503 PTPRSQ13332 1948 aa13.41□□□□□ -0.26
HMGB2-201ENST00000296503 GOLGA6L22H0YM25 854 aa13.4□□□□□ -0.26
HMGB2-201ENST00000296503 ZNF500O60304 480 aaPredicted RBP13.4□□□□□ -0.26
HMGB2-201ENST00000296503 SLC34A2O95436 690 aa13.4□□□□□ -0.26
HMGB2-201ENST00000296503 EYA4O95677 639 aa13.4□□□□□ -0.26
HMGB2-201ENST00000296503 ZSCAN22P10073 491 aaPredicted RBP13.4□□□□□ -0.26
HMGB2-201ENST00000296503 CYP11B2P19099 503 aa13.4□□□□□ -0.26
HMGB2-201ENST00000296503 ARL2P36404 184 aa13.4□□□□□ -0.26
HMGB2-201ENST00000296503 SARSP49591 514 aaKnown RBP13.4□□□□□ -0.26
HMGB2-201ENST00000296503 ZNF445P59923 1031 aa13.4□□□□□ -0.26
HMGB2-201ENST00000296503 SRGAP1Q7Z6B7 1085 aa13.4□□□□□ -0.26
HMGB2-201ENST00000296503 CABP7Q86V35 215 aa13.4□□□□□ -0.26
HMGB2-201ENST00000296503 NPAS4Q8IUM7 802 aa13.4□□□□□ -0.26
HMGB2-201ENST00000296503 MYLIPQ8WY64 445 aa13.4□□□□□ -0.26
HMGB2-201ENST00000296503 ARNTL2Q8WYA1 636 aa13.4□□□□□ -0.26
HMGB2-201ENST00000296503 CALML4Q96GE6 196 aa13.4□□□□□ -0.26
HMGB2-201ENST00000296503 ZNF396Q96N95 335 aaPredicted RBP13.4□□□□□ -0.26
HMGB2-201ENST00000296503 NT5C3AQ9H0P0 336 aa13.4□□□□□ -0.26
HMGB2-201ENST00000296503 POLR3FQ9H1D9 316 aaPredicted RBP13.4□□□□□ -0.26
HMGB2-201ENST00000296503 IFT122Q9HBG6 1241 aa13.4□□□□□ -0.26
HMGB2-201ENST00000296503 GPRC5CQ9NQ84 441 aa13.4□□□□□ -0.26
HMGB2-201ENST00000296503 TFIP11Q9UBB9 837 aaKnown RBP13.4□□□□□ -0.26
HMGB2-201ENST00000296503 ARHGEF15O94989 841 aa13.4□□□□□ -0.26
HMGB2-201ENST00000296503 LONP1P36776 959 aaKnown RBP13.4□□□□□ -0.26
HMGB2-201ENST00000296503 PHKA2P46019 1235 aa13.4□□□□□ -0.26
HMGB2-201ENST00000296503 DSC3Q14574 896 aa13.4□□□□□ -0.26
HMGB2-201ENST00000296503 PTPAQ15257 358 aa13.4□□□□□ -0.26
HMGB2-201ENST00000296503 FOXD4L6Q3SYB3 417 aaPredicted RBP13.4□□□□□ -0.26
HMGB2-201ENST00000296503 FOXD4L3Q6VB84 417 aaPredicted RBP13.4□□□□□ -0.26
HMGB2-201ENST00000296503 GAS2L3Q86XJ1 694 aa13.4□□□□□ -0.26
HMGB2-201ENST00000296503 RASSF8Q8NHQ8 419 aa13.4□□□□□ -0.26
HMGB2-201ENST00000296503 ASAP3Q8TDY4 903 aa13.4□□□□□ -0.26
HMGB2-201ENST00000296503 USP28Q96RU2 1077 aa13.4□□□□□ -0.26
HMGB2-201ENST00000296503 GAS2L1Q99501 681 aaPredicted RBP13.4□□□□□ -0.26
HMGB2-201ENST00000296503 POLD4Q9HCU8 107 aa13.4□□□□□ -0.26
HMGB2-201ENST00000296503 CHST12Q9NRB3 414 aa13.4□□□□□ -0.26
HMGB2-201ENST00000296503 MTUS1Q9ULD2 1270 aa13.4□□□□□ -0.26
HMGB2-201ENST00000296503 TTC3P53804 2025 aa13.39□□□□□ -0.27
HMGB2-201ENST00000296503 LINC01553A4QN01 128 aa13.39□□□□□ -0.27
HMGB2-201ENST00000296503 C9IYK1 514 aa13.39□□□□□ -0.27
HMGB2-201ENST00000296503 SSBP05455 408 aaKnown RBP eCLIP13.39□□□□□ -0.27
HMGB2-201ENST00000296503 GLRA2P23416 452 aa13.39□□□□□ -0.27
HMGB2-201ENST00000296503 GRIN1Q05586 938 aa13.39□□□□□ -0.27
HMGB2-201ENST00000296503 FIBCD1Q8N539 461 aa13.39□□□□□ -0.27
HMGB2-201ENST00000296503 PNMA5Q96PV4 448 aa13.39□□□□□ -0.27
HMGB2-201ENST00000296503 TGS1Q96RS0 853 aaKnown RBP13.39□□□□□ -0.27
HMGB2-201ENST00000296503 DACT1Q9NYF0 836 aa13.39□□□□□ -0.27
HMGB2-201ENST00000296503 PIN4Q9Y237 131 aaKnown RBP13.39□□□□□ -0.27
HMGB2-201ENST00000296503 SRPRBQ9Y5M8 271 aaKnown RBP13.39□□□□□ -0.27
HMGB2-201ENST00000296503 ARID2Q68CP9 1835 aa13.38□□□□□ -0.27
HMGB2-201ENST00000296503 LRRIQ4A6NIV6 560 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms