RNA–Protein interactions for RNA: ENST00000288976.3

PTPDC1-201, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-201ENST00000288976 BICDL2A1A5D9 508 aa9.28□□□□□ -0.92
PTPDC1-201ENST00000288976 DNM1LO00429 736 aa9.28□□□□□ -0.92
PTPDC1-201ENST00000288976 SORBS3O60504 671 aa9.28□□□□□ -0.92
PTPDC1-201ENST00000288976 CAND2O75155 1236 aa9.28□□□□□ -0.92
PTPDC1-201ENST00000288976 NAMPTP43490 491 aa9.28□□□□□ -0.92
PTPDC1-201ENST00000288976 HSP90AA2PQ14568 343 aaPredicted RBP9.28□□□□□ -0.92
PTPDC1-201ENST00000288976 PCBP1Q15365 356 aaKnown RBP eCLIP9.28□□□□□ -0.92
PTPDC1-201ENST00000288976 UVSSAQ2YD98 709 aa9.28□□□□□ -0.92
PTPDC1-201ENST00000288976 SLC9C1Q4G0N8 1177 aa9.28□□□□□ -0.92
PTPDC1-201ENST00000288976 GJC2Q5T442 439 aaPredicted RBP9.28□□□□□ -0.92
PTPDC1-201ENST00000288976 CDCA2Q69YH5 1023 aaPredicted RBP9.28□□□□□ -0.92
PTPDC1-201ENST00000288976 MTHFD1LQ6UB35 978 aa9.28□□□□□ -0.92
PTPDC1-201ENST00000288976 ADSSL1Q8N142 457 aa9.28□□□□□ -0.92
PTPDC1-201ENST00000288976 SMIM35A0A1B0GVV1 85 aa9.28□□□□□ -0.92
PTPDC1-201ENST00000288976 PPP1R3GB7ZBB8 358 aa9.28□□□□□ -0.92
PTPDC1-201ENST00000288976 USO1O60763 962 aaKnown RBP9.28□□□□□ -0.92
PTPDC1-201ENST00000288976 HSPA1AP0DMV8 641 aaKnown RBP9.28□□□□□ -0.92
PTPDC1-201ENST00000288976 HSPA1BP0DMV9 641 aaKnown RBP9.28□□□□□ -0.92
PTPDC1-201ENST00000288976 SMIM10L2AP0DMW4 78 aa9.28□□□□□ -0.92
PTPDC1-201ENST00000288976 SMIM10L2BP0DMW5 78 aa9.28□□□□□ -0.92
PTPDC1-201ENST00000288976 ADAM17P78536 824 aa9.28□□□□□ -0.92
PTPDC1-201ENST00000288976 TBC1D8BQ0IIM8 1120 aa9.28□□□□□ -0.92
PTPDC1-201ENST00000288976 PPFIA1Q13136 1202 aa9.28□□□□□ -0.92
PTPDC1-201ENST00000288976 DMP1Q13316 513 aaPredicted RBP9.28□□□□□ -0.92
PTPDC1-201ENST00000288976 GRIK4Q16099 956 aa9.28□□□□□ -0.92
PTPDC1-201ENST00000288976 RPAINQ86UA6 219 aa9.28□□□□□ -0.92
PTPDC1-201ENST00000288976 ZNF333Q96JL9 665 aa9.28□□□□□ -0.92
PTPDC1-201ENST00000288976 CRISPLD2Q9H0B8 497 aa9.28□□□□□ -0.92
PTPDC1-201ENST00000288976 XPNPEP1Q9NQW7 623 aa9.28□□□□□ -0.92
PTPDC1-201ENST00000288976 OGDHLQ9ULD0 1010 aa9.28□□□□□ -0.92
PTPDC1-201ENST00000288976 COMMD10Q9Y6G5 202 aa9.28□□□□□ -0.92
PTPDC1-201ENST00000288976 SMTNL1A8MU46 457 aa9.27□□□□□ -0.92
PTPDC1-201ENST00000288976 ZBTB39O15060 712 aa9.27□□□□□ -0.92
PTPDC1-201ENST00000288976 PPP1R37O75864 691 aa9.27□□□□□ -0.92
PTPDC1-201ENST00000288976 DESP17661 470 aa9.27□□□□□ -0.92
PTPDC1-201ENST00000288976 SMTNP53814 917 aa9.27□□□□□ -0.92
PTPDC1-201ENST00000288976 MTERF2Q49AM1 385 aa9.27□□□□□ -0.92
PTPDC1-201ENST00000288976 ANO6Q4KMQ2 910 aa9.27□□□□□ -0.92
PTPDC1-201ENST00000288976 DYMQ7RTS9 669 aa9.27□□□□□ -0.92
PTPDC1-201ENST00000288976 IFNLR1Q8IU57 520 aaPredicted RBP9.27□□□□□ -0.92
PTPDC1-201ENST00000288976 ZC3H3Q8IXZ2 948 aaKnown RBP9.27□□□□□ -0.92
PTPDC1-201ENST00000288976 DAW1Q8N136 415 aa9.27□□□□□ -0.92
PTPDC1-201ENST00000288976 ANKLE1Q8NAG6 615 aa9.27□□□□□ -0.92
PTPDC1-201ENST00000288976 SLC43A3Q8NBI5 491 aa9.27□□□□□ -0.92
PTPDC1-201ENST00000288976 SPC24Q8NBT2 197 aa9.27□□□□□ -0.92
PTPDC1-201ENST00000288976 ZNF507Q8TCN5 953 aa9.27□□□□□ -0.92
PTPDC1-201ENST00000288976 FIZ1Q96SL8 496 aa9.27□□□□□ -0.92
PTPDC1-201ENST00000288976 BMP6P22004 513 aa9.27□□□□□ -0.93
PTPDC1-201ENST00000288976 DNM2P50570 870 aa9.27□□□□□ -0.93
PTPDC1-201ENST00000288976 TFDP1Q14186 410 aa9.27□□□□□ -0.93
PTPDC1-201ENST00000288976 TRIM50Q86XT4 487 aa9.27□□□□□ -0.93
PTPDC1-201ENST00000288976 KIAA0895Q8NCT3 520 aa9.27□□□□□ -0.93
PTPDC1-201ENST00000288976 GOLGA5Q8TBA6 731 aa9.27□□□□□ -0.93
PTPDC1-201ENST00000288976 IFT74Q96LB3 600 aa9.27□□□□□ -0.93
PTPDC1-201ENST00000288976 POLR3FQ9H1D9 316 aaPredicted RBP9.27□□□□□ -0.93
PTPDC1-201ENST00000288976 TMEM134Q9H6X4 195 aa9.27□□□□□ -0.93
PTPDC1-201ENST00000288976 TSKSQ9UJT2 592 aa9.27□□□□□ -0.93
PTPDC1-201ENST00000288976 PCDHB13Q9Y5F0 798 aa9.27□□□□□ -0.93
PTPDC1-201ENST00000288976 NPHP3-ACAD11A0A0J9YXS1 232 aa9.27□□□□□ -0.93
PTPDC1-201ENST00000288976 FSD2A1L4K1 749 aa9.27□□□□□ -0.93
PTPDC1-201ENST00000288976 C17orf102A2RUQ5 167 aa9.27□□□□□ -0.93
PTPDC1-201ENST00000288976 C6orf222P0C671 652 aaPredicted RBP9.27□□□□□ -0.93
PTPDC1-201ENST00000288976 GTF2BQ00403 316 aa9.27□□□□□ -0.93
PTPDC1-201ENST00000288976 LRRC41Q15345 812 aa9.27□□□□□ -0.93
PTPDC1-201ENST00000288976 ZNF410Q86VK4 478 aa9.27□□□□□ -0.93
PTPDC1-201ENST00000288976 SFR1Q86XK3 245 aa9.27□□□□□ -0.93
PTPDC1-201ENST00000288976 NME8Q8N427 588 aa9.27□□□□□ -0.93
PTPDC1-201ENST00000288976 C2orf40Q9H1Z8 148 aa9.27□□□□□ -0.93
PTPDC1-201ENST00000288976 RNPEPQ9H4A4 650 aa9.27□□□□□ -0.93
PTPDC1-201ENST00000288976 TMEM206Q9H813 350 aa9.27□□□□□ -0.93
PTPDC1-201ENST00000288976 INSRRP14616 1297 aa9.26□□□□□ -0.93
PTPDC1-201ENST00000288976 LRRC63Q05C16 580 aa9.26□□□□□ -0.93
PTPDC1-201ENST00000288976 KIAA0753Q2KHM9 967 aa9.26□□□□□ -0.93
PTPDC1-201ENST00000288976 DPCR1Q3MIW9 517 aa9.26□□□□□ -0.93
PTPDC1-201ENST00000288976 FAM102BQ5T8I3 360 aa9.26□□□□□ -0.93
PTPDC1-201ENST00000288976 STAMQ92783 540 aa9.26□□□□□ -0.93
PTPDC1-201ENST00000288976 LENG1Q96BZ8 264 aaPredicted RBP9.26□□□□□ -0.93
PTPDC1-201ENST00000288976 MYADML2A6NDP7 307 aa9.26□□□□□ -0.93
PTPDC1-201ENST00000288976 PSMA7O14818 248 aa9.26□□□□□ -0.93
PTPDC1-201ENST00000288976 CCL5P13501 91 aa9.26□□□□□ -0.93
PTPDC1-201ENST00000288976 TMOD1P28289 359 aa9.26□□□□□ -0.93
PTPDC1-201ENST00000288976 NPEPPSP55786 919 aa9.26□□□□□ -0.93
PTPDC1-201ENST00000288976 PAK1Q13153 545 aa9.26□□□□□ -0.93
PTPDC1-201ENST00000288976 MYBPC2Q14324 1141 aa9.26□□□□□ -0.93
PTPDC1-201ENST00000288976 FILIP1Q7Z7B0 1213 aa9.26□□□□□ -0.93
PTPDC1-201ENST00000288976 MYOCDQ8IZQ8 938 aa9.26□□□□□ -0.93
PTPDC1-201ENST00000288976 ENOX1Q8TC92 643 aaKnown RBP9.26□□□□□ -0.93
PTPDC1-201ENST00000288976 GTF2IRD1Q9UHL9 959 aa9.26□□□□□ -0.93
PTPDC1-201ENST00000288976 EXOC7Q9UPT5 735 aa9.26□□□□□ -0.93
PTPDC1-201ENST00000288976 TANC1Q9C0D5 1861 aa9.26□□□□□ -0.93
PTPDC1-201ENST00000288976 TPRP12270 2363 aaKnown RBP9.26□□□□□ -0.93
PTPDC1-201ENST00000288976 EFNA5P52803 228 aa9.26□□□□□ -0.93
PTPDC1-201ENST00000288976 ENPEPQ07075 957 aa9.26□□□□□ -0.93
PTPDC1-201ENST00000288976 MARCH8Q5T0T0 291 aa9.26□□□□□ -0.93
PTPDC1-201ENST00000288976 C11orf57Q6ZUT1 292 aaPredicted RBP9.26□□□□□ -0.93
PTPDC1-201ENST00000288976 ZNF720Q7Z2F6 126 aa9.26□□□□□ -0.93
PTPDC1-201ENST00000288976 MYCT1Q8N699 235 aa9.26□□□□□ -0.93
PTPDC1-201ENST00000288976 KBTBD13C9JR72 458 aa9.26□□□□□ -0.93
PTPDC1-201ENST00000288976 PIGRP01833 764 aa9.26□□□□□ -0.93
PTPDC1-201ENST00000288976 CASP1P29466 404 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms