RNA–Protein interactions for RNA: ENST00000284770.9

PDLIM3-202, Transcript of PDZ and LIM domain 3, humanhuman

TSL 1 (best) BASIC

Gene PDLIM3, Length 1,766 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-202ENST00000284770 BMT2Q1RMZ1 405 aa20.85■□□□□ 0.93
PDLIM3-202ENST00000284770 PRPF31Q8WWY3 499 aaKnown RBP20.85■□□□□ 0.93
PDLIM3-202ENST00000284770 PSPC1Q8WXF1 523 aaKnown RBP20.85■□□□□ 0.93
PDLIM3-202ENST00000284770 PDLIM2Q96JY6 352 aa20.85■□□□□ 0.93
PDLIM3-202ENST00000284770 KMT5AQ9NQR1 393 aa20.85■□□□□ 0.93
PDLIM3-202ENST00000284770 SUCLA2Q9P2R7 463 aaPredicted RBP20.85■□□□□ 0.93
PDLIM3-202ENST00000284770 MYH11P35749 1972 aa20.84■□□□□ 0.93
PDLIM3-202ENST00000284770 MBLAC1A4D2B0 266 aaPredicted RBP20.84■□□□□ 0.93
PDLIM3-202ENST00000284770 MOXD2PA6NHM9 499 aa20.84■□□□□ 0.93
PDLIM3-202ENST00000284770 PPP1R37O75864 691 aa20.84■□□□□ 0.93
PDLIM3-202ENST00000284770 CCNE1P24864 410 aa20.84■□□□□ 0.93
PDLIM3-202ENST00000284770 TMOD1P28289 359 aa20.84■□□□□ 0.93
PDLIM3-202ENST00000284770 HOXC8P31273 242 aa20.84■□□□□ 0.93
PDLIM3-202ENST00000284770 ACLYP53396 1101 aa20.84■□□□□ 0.93
PDLIM3-202ENST00000284770 STX17P56962 302 aa20.84■□□□□ 0.93
PDLIM3-202ENST00000284770 ALCAMQ13740 583 aa20.84■□□□□ 0.93
PDLIM3-202ENST00000284770 NBPF20Q3BBV1 942 aa20.84■□□□□ 0.93
PDLIM3-202ENST00000284770 ZC2HC1CQ53FD0 456 aaPredicted RBP20.84■□□□□ 0.93
PDLIM3-202ENST00000284770 CENPPQ6IPU0 288 aa20.84■□□□□ 0.93
PDLIM3-202ENST00000284770 NFRKBQ6P4R8 1299 aa20.84■□□□□ 0.93
PDLIM3-202ENST00000284770 HAUS6Q7Z4H7 955 aa20.84■□□□□ 0.93
PDLIM3-202ENST00000284770 PPP1R13LQ8WUF5 828 aa20.84■□□□□ 0.93
PDLIM3-202ENST00000284770 P2RX5Q93086 422 aa20.84■□□□□ 0.93
PDLIM3-202ENST00000284770 RNF208Q9H0X6 261 aa20.84■□□□□ 0.93
PDLIM3-202ENST00000284770 HDAC6Q9UBN7 1215 aa20.84■□□□□ 0.93
PDLIM3-202ENST00000284770 SLC16A4O15374 487 aa20.83■□□□□ 0.93
PDLIM3-202ENST00000284770 PRPF6O94906 941 aaKnown RBP20.83■□□□□ 0.93
PDLIM3-202ENST00000284770 MYCP01106 439 aaPredicted RBP20.83■□□□□ 0.93
PDLIM3-202ENST00000284770 GNAT1P11488 350 aa20.83■□□□□ 0.93
PDLIM3-202ENST00000284770 NAMPTP43490 491 aa20.83■□□□□ 0.93
PDLIM3-202ENST00000284770 CLCN3P51790 818 aa20.83■□□□□ 0.93
PDLIM3-202ENST00000284770 PMS1P54277 932 aaKnown RBP20.83■□□□□ 0.93
PDLIM3-202ENST00000284770 GTF2BQ00403 316 aa20.83■□□□□ 0.93
PDLIM3-202ENST00000284770 TMEM161BQ8NDZ6 487 aa20.83■□□□□ 0.93
PDLIM3-202ENST00000284770 PPP1R9BQ96SB3 815 aa20.83■□□□□ 0.93
PDLIM3-202ENST00000284770 SEMA6BQ9H3T3 888 aa20.83■□□□□ 0.93
PDLIM3-202ENST00000284770 UBE4BO95155 1302 aa20.83■□□□□ 0.92
PDLIM3-202ENST00000284770 BICDL2A1A5D9 508 aa20.82■□□□□ 0.92
PDLIM3-202ENST00000284770 C17orf102A2RUQ5 167 aa20.82■□□□□ 0.92
PDLIM3-202ENST00000284770 ASAP2O43150 1006 aa20.82■□□□□ 0.92
PDLIM3-202ENST00000284770 HOXD13P35453 343 aa20.82■□□□□ 0.92
PDLIM3-202ENST00000284770 LAMTOR4Q0VGL1 99 aa20.82■□□□□ 0.92
PDLIM3-202ENST00000284770 HIC1Q14526 733 aa20.82■□□□□ 0.92
PDLIM3-202ENST00000284770 KNOP1Q1ED39 458 aaKnown RBP20.82■□□□□ 0.92
PDLIM3-202ENST00000284770 NELFCDQ8IXH7 590 aa20.82■□□□□ 0.92
PDLIM3-202ENST00000284770 DEFB118Q96PH6 123 aa20.82■□□□□ 0.92
PDLIM3-202ENST00000284770 SCN10AQ9Y5Y9 1956 aa20.82■□□□□ 0.92
PDLIM3-202ENST00000284770 TRIM49BA6NDI0 452 aa20.82■□□□□ 0.92
PDLIM3-202ENST00000284770 H0YCG3 227 aa20.82■□□□□ 0.92
PDLIM3-202ENST00000284770 SCP2P22307 547 aa20.82■□□□□ 0.92
PDLIM3-202ENST00000284770 KCNA1Q09470 495 aa20.82■□□□□ 0.92
PDLIM3-202ENST00000284770 CCDC173Q0VFZ6 552 aa20.82■□□□□ 0.92
PDLIM3-202ENST00000284770 SPATA1Q5VX52 437 aa20.82■□□□□ 0.92
PDLIM3-202ENST00000284770 ANKRD40Q6AI12 368 aa20.82■□□□□ 0.92
PDLIM3-202ENST00000284770 TTI2Q6NXR4 508 aa20.82■□□□□ 0.92
PDLIM3-202ENST00000284770 FOXR2Q6PJQ5 311 aa20.82■□□□□ 0.92
PDLIM3-202ENST00000284770 SARM1Q6SZW1 724 aa20.82■□□□□ 0.92
PDLIM3-202ENST00000284770 RHPN2Q8IUC4 686 aa20.82■□□□□ 0.92
PDLIM3-202ENST00000284770 KCNN1Q92952 543 aa20.82■□□□□ 0.92
PDLIM3-202ENST00000284770 KIFC3Q9BVG8 833 aa20.82■□□□□ 0.92
PDLIM3-202ENST00000284770 KCTD10Q9H3F6 313 aa20.82■□□□□ 0.92
PDLIM3-202ENST00000284770 ARHGAP28Q9P2N2 729 aa20.82■□□□□ 0.92
PDLIM3-202ENST00000284770 GTF2IRD1Q9UHL9 959 aa20.82■□□□□ 0.92
PDLIM3-202ENST00000284770 ADCY5O95622 1261 aa20.81■□□□□ 0.92
PDLIM3-202ENST00000284770 ABCD1P33897 745 aa20.81■□□□□ 0.92
PDLIM3-202ENST00000284770 CAPSQ13938 189 aa20.81■□□□□ 0.92
PDLIM3-202ENST00000284770 SESTD1Q86VW0 696 aa20.81■□□□□ 0.92
PDLIM3-202ENST00000284770 KIAA0319LQ8IZA0 1049 aa20.81■□□□□ 0.92
PDLIM3-202ENST00000284770 HVCN1Q96D96 273 aa20.81■□□□□ 0.92
PDLIM3-202ENST00000284770 ZNF333Q96JL9 665 aa20.81■□□□□ 0.92
PDLIM3-202ENST00000284770 NFE2L3Q9Y4A8 694 aa20.81■□□□□ 0.92
PDLIM3-202ENST00000284770 ADGRA3Q8IWK6 1321 aa20.81■□□□□ 0.92
PDLIM3-202ENST00000284770 SMIM35A0A1B0GVV1 85 aa20.8■□□□□ 0.92
PDLIM3-202ENST00000284770 DENND3A2RUS2 1198 aa20.8■□□□□ 0.92
PDLIM3-202ENST00000284770 LRRIQ4A6NIV6 560 aa20.8■□□□□ 0.92
PDLIM3-202ENST00000284770 PLCB2Q00722 1185 aa20.8■□□□□ 0.92
PDLIM3-202ENST00000284770 LRRC63Q05C16 580 aa20.8■□□□□ 0.92
PDLIM3-202ENST00000284770 KSR1Q8IVT5 923 aa20.8■□□□□ 0.92
PDLIM3-202ENST00000284770 DEPTORQ8TB45 409 aa20.8■□□□□ 0.92
PDLIM3-202ENST00000284770 ARMC5Q96C12 935 aa20.8■□□□□ 0.92
PDLIM3-202ENST00000284770 GLT1D1Q96MS3 346 aa20.8■□□□□ 0.92
PDLIM3-202ENST00000284770 FANCLQ9NW38 375 aa20.8■□□□□ 0.92
PDLIM3-202ENST00000284770 GRIN2DO15399 1336 aa20.8■□□□□ 0.92
PDLIM3-202ENST00000284770 FRMPD3Q5JV73 1810 aa20.8■□□□□ 0.92
PDLIM3-202ENST00000284770 KBTBD13C9JR72 458 aa20.8■□□□□ 0.92
PDLIM3-202ENST00000284770 TREHO43280 583 aa20.8■□□□□ 0.92
PDLIM3-202ENST00000284770 GJB1P08034 283 aa20.8■□□□□ 0.92
PDLIM3-202ENST00000284770 ZNF200P98182 395 aaPredicted RBP20.8■□□□□ 0.92
PDLIM3-202ENST00000284770 TFDP1Q14186 410 aa20.8■□□□□ 0.92
PDLIM3-202ENST00000284770 ZCWPW2Q504Y3 356 aa20.8■□□□□ 0.92
PDLIM3-202ENST00000284770 RNF149Q8NC42 400 aa20.8■□□□□ 0.92
PDLIM3-202ENST00000284770 VTI1AQ96AJ9 217 aa20.8■□□□□ 0.92
PDLIM3-202ENST00000284770 ACCSQ96QU6 501 aa20.8■□□□□ 0.92
PDLIM3-202ENST00000284770 MAP7D2Q96T17 732 aa20.8■□□□□ 0.92
PDLIM3-202ENST00000284770 TSG101Q99816 390 aa20.8■□□□□ 0.92
PDLIM3-202ENST00000284770 DUSP9Q99956 384 aaKnown RBP20.8■□□□□ 0.92
PDLIM3-202ENST00000284770 TMEM206Q9H813 350 aa20.8■□□□□ 0.92
PDLIM3-202ENST00000284770 OGDHLQ9ULD0 1010 aa20.8■□□□□ 0.92
PDLIM3-202ENST00000284770 TBX20Q9UMR3 447 aa20.8■□□□□ 0.92
PDLIM3-202ENST00000284770 AKT3Q9Y243 479 aa20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms