RNA–Protein interactions for RNA: ENST00000284767.9

PDLIM3-201, Transcript of PDZ and LIM domain 3, humanhuman

TSL 5 BASIC

Gene PDLIM3, Length 2,589 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-201ENST00000284767 HGSNATQ68CP4 663 aa19.94■□□□□ 0.78
PDLIM3-201ENST00000284767 MYCT1Q8N699 235 aa19.94■□□□□ 0.78
PDLIM3-201ENST00000284767 KAT2BQ92831 832 aa19.94■□□□□ 0.78
PDLIM3-201ENST00000284767 SNCAIPQ9Y6H5 919 aa19.94■□□□□ 0.78
PDLIM3-201ENST00000284767 BCRP11274 1271 aa19.94■□□□□ 0.78
PDLIM3-201ENST00000284767 NR2F2P24468 414 aa19.94■□□□□ 0.78
PDLIM3-201ENST00000284767 USP8P40818 1118 aa19.94■□□□□ 0.78
PDLIM3-201ENST00000284767 PDE4CQ08493 712 aa19.94■□□□□ 0.78
PDLIM3-201ENST00000284767 PDCLQ13371 301 aa19.94■□□□□ 0.78
PDLIM3-201ENST00000284767 SUPT20HL1Q3ZLR7 823 aa19.94■□□□□ 0.78
PDLIM3-201ENST00000284767 CATSPERGQ6ZRH7 1159 aa19.94■□□□□ 0.78
PDLIM3-201ENST00000284767 C12orf42Q96LP6 360 aa19.94■□□□□ 0.78
PDLIM3-201ENST00000284767 SYT17Q9BSW7 474 aa19.94■□□□□ 0.78
PDLIM3-201ENST00000284767 PAGR1Q9BTK6 254 aa19.94■□□□□ 0.78
PDLIM3-201ENST00000284767 CLIC2O15247 247 aa19.93■□□□□ 0.78
PDLIM3-201ENST00000284767 GLI1P08151 1106 aa19.93■□□□□ 0.78
PDLIM3-201ENST00000284767 IRX3P78415 501 aaPredicted RBP19.93■□□□□ 0.78
PDLIM3-201ENST00000284767 KNOP1Q1ED39 458 aaKnown RBP19.93■□□□□ 0.78
PDLIM3-201ENST00000284767 SLC9C1Q4G0N8 1177 aa19.93■□□□□ 0.78
PDLIM3-201ENST00000284767 TREML2Q5T2D2 321 aa19.93■□□□□ 0.78
PDLIM3-201ENST00000284767 TTC19Q6DKK2 380 aaPredicted RBP19.93■□□□□ 0.78
PDLIM3-201ENST00000284767 MOB2Q70IA6 237 aa19.93■□□□□ 0.78
PDLIM3-201ENST00000284767 ANKRD13CQ8N6S4 541 aa19.93■□□□□ 0.78
PDLIM3-201ENST00000284767 CCDC43Q96MW1 224 aaKnown RBP19.93■□□□□ 0.78
PDLIM3-201ENST00000284767 NACC1Q96RE7 527 aa19.93■□□□□ 0.78
PDLIM3-201ENST00000284767 C19orf81C9J6K1 198 aa19.93■□□□□ 0.78
PDLIM3-201ENST00000284767 FAM13AO94988 1023 aa19.93■□□□□ 0.78
PDLIM3-201ENST00000284767 HEXIM1O94992 359 aaKnown RBP19.93■□□□□ 0.78
PDLIM3-201ENST00000284767 KCNMA1Q12791 1236 aa19.93■□□□□ 0.78
PDLIM3-201ENST00000284767 TMOD4Q9NZQ9 345 aa19.93■□□□□ 0.78
PDLIM3-201ENST00000284767 CEP72Q9P209 647 aa19.93■□□□□ 0.78
PDLIM3-201ENST00000284767 TELO2Q9Y4R8 837 aa19.93■□□□□ 0.78
PDLIM3-201ENST00000284767 SPDYE16A6NNV3 312 aaPredicted RBP19.92■□□□□ 0.78
PDLIM3-201ENST00000284767 BUB1O43683 1085 aa19.92■□□□□ 0.78
PDLIM3-201ENST00000284767 SORBS3O60504 671 aa19.92■□□□□ 0.78
PDLIM3-201ENST00000284767 CARSP49589 748 aaKnown RBP19.92■□□□□ 0.78
PDLIM3-201ENST00000284767 NAP1L1P55209 391 aaKnown RBP19.92■□□□□ 0.78
PDLIM3-201ENST00000284767 UGCGQ16739 394 aa19.92■□□□□ 0.78
PDLIM3-201ENST00000284767 WHAMMQ8TF30 809 aa19.92■□□□□ 0.78
PDLIM3-201ENST00000284767 MS4A14Q96JA4 679 aa19.92■□□□□ 0.78
PDLIM3-201ENST00000284767 RABEP2Q9H5N1 569 aa19.92■□□□□ 0.78
PDLIM3-201ENST00000284767 NFU1Q9UMS0 254 aa19.92■□□□□ 0.78
PDLIM3-201ENST00000284767 ADAMTS5Q9UNA0 930 aa19.92■□□□□ 0.78
PDLIM3-201ENST00000284767 ASTN1O14525 1302 aa19.92■□□□□ 0.78
PDLIM3-201ENST00000284767 FRMPD4Q14CM0 1322 aa19.92■□□□□ 0.78
PDLIM3-201ENST00000284767 ZNF233A6NK53 670 aa19.92■□□□□ 0.78
PDLIM3-201ENST00000284767 KRT14P02533 472 aa19.92■□□□□ 0.78
PDLIM3-201ENST00000284767 SERPING1P05155 500 aa19.92■□□□□ 0.78
PDLIM3-201ENST00000284767 TDRD12Q587J7 1177 aaKnown RBP19.92■□□□□ 0.78
PDLIM3-201ENST00000284767 MICALCLQ6ZW33 695 aa19.92■□□□□ 0.78
PDLIM3-201ENST00000284767 CNPY4Q8N129 248 aa19.92■□□□□ 0.78
PDLIM3-201ENST00000284767 EPB41L5Q9HCM4 733 aa19.92■□□□□ 0.78
PDLIM3-201ENST00000284767 PPP2R3BQ9Y5P8 575 aa19.92■□□□□ 0.78
PDLIM3-201ENST00000284767 KIAA0754O94854 1291 aa19.91■□□□□ 0.78
PDLIM3-201ENST00000284767 CCNE2O96020 404 aa19.91■□□□□ 0.78
PDLIM3-201ENST00000284767 NAB2Q15742 525 aa19.91■□□□□ 0.78
PDLIM3-201ENST00000284767 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP19.91■□□□□ 0.78
PDLIM3-201ENST00000284767 FIZ1Q96SL8 496 aa19.91■□□□□ 0.78
PDLIM3-201ENST00000284767 EPN3Q9H201 632 aa19.91■□□□□ 0.78
PDLIM3-201ENST00000284767 ADARB2Q9NS39 739 aaKnown RBP19.91■□□□□ 0.78
PDLIM3-201ENST00000284767 SRRM3A6NNA2 597 aaPredicted RBP19.91■□□□□ 0.78
PDLIM3-201ENST00000284767 CASP4P49662 377 aa19.91■□□□□ 0.78
PDLIM3-201ENST00000284767 GUCY2DQ02846 1103 aa19.91■□□□□ 0.78
PDLIM3-201ENST00000284767 SFMBT2Q5VUG0 894 aa19.91■□□□□ 0.78
PDLIM3-201ENST00000284767 C9orf131Q5VYM1 1079 aa19.91■□□□□ 0.78
PDLIM3-201ENST00000284767 YTHDF3Q7Z739 585 aaKnown RBP19.91■□□□□ 0.78
PDLIM3-201ENST00000284767 TRIM59Q8IWR1 403 aa19.91■□□□□ 0.78
PDLIM3-201ENST00000284767 SH2D3CQ8N5H7 860 aa19.91■□□□□ 0.78
PDLIM3-201ENST00000284767 CEP63Q96MT8 703 aa19.91■□□□□ 0.78
PDLIM3-201ENST00000284767 ARHGEF35A5YM69 484 aa19.9■□□□□ 0.78
PDLIM3-201ENST00000284767 NR3C2P08235 984 aa19.9■□□□□ 0.78
PDLIM3-201ENST00000284767 LSP1P33241 339 aa19.9■□□□□ 0.78
PDLIM3-201ENST00000284767 NOL9Q5SY16 702 aaKnown RBP19.9■□□□□ 0.78
PDLIM3-201ENST00000284767 KCTD16Q68DU8 428 aa19.9■□□□□ 0.78
PDLIM3-201ENST00000284767 DAW1Q8N136 415 aa19.9■□□□□ 0.78
PDLIM3-201ENST00000284767 DCPSQ96C86 337 aaKnown RBP19.9■□□□□ 0.78
PDLIM3-201ENST00000284767 CLMNQ96JQ2 1002 aa19.9■□□□□ 0.78
PDLIM3-201ENST00000284767 PARVGQ9HBI0 331 aa19.9■□□□□ 0.78
PDLIM3-201ENST00000284767 A1CFQ9NQ94 594 aaKnown RBP19.9■□□□□ 0.78
PDLIM3-201ENST00000284767 GEMIN8Q9NWZ8 242 aaKnown RBP19.9■□□□□ 0.78
PDLIM3-201ENST00000284767 PCDHGC5Q9Y5F6 944 aa19.9■□□□□ 0.78
PDLIM3-201ENST00000284767 MEFVO15553 781 aaPredicted RBP19.9■□□□□ 0.78
PDLIM3-201ENST00000284767 PALMO75781 387 aa19.9■□□□□ 0.78
PDLIM3-201ENST00000284767 AKAP3O75969 853 aa19.9■□□□□ 0.78
PDLIM3-201ENST00000284767 FAM153BP0C7A2 387 aa19.9■□□□□ 0.78
PDLIM3-201ENST00000284767 HNRNPH1P31943 449 aaKnown RBP19.9■□□□□ 0.78
PDLIM3-201ENST00000284767 ATP1A2P50993 1020 aa19.9■□□□□ 0.78
PDLIM3-201ENST00000284767 FAM153CQ494X1 144 aa19.9■□□□□ 0.78
PDLIM3-201ENST00000284767 NIPA1Q7RTP0 329 aa19.9■□□□□ 0.78
PDLIM3-201ENST00000284767 SULF1Q8IWU6 871 aa19.9■□□□□ 0.78
PDLIM3-201ENST00000284767 PIK3R5Q8WYR1 880 aa19.9■□□□□ 0.78
PDLIM3-201ENST00000284767 RNPC3Q96LT9 517 aaKnown RBP19.9■□□□□ 0.78
PDLIM3-201ENST00000284767 FAM153AQ9UHL3 310 aa19.9■□□□□ 0.78
PDLIM3-201ENST00000284767 TRAF3IP3Q9Y228 551 aa19.9■□□□□ 0.78
PDLIM3-201ENST00000284767 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.9■□□□□ 0.78
PDLIM3-201ENST00000284767 ZMYM2Q9UBW7 1377 aa19.9■□□□□ 0.78
PDLIM3-201ENST00000284767 HMGB1P1B2RPK0 211 aaPredicted RBP19.9■□□□□ 0.78
PDLIM3-201ENST00000284767 CETN3O15182 167 aa19.9■□□□□ 0.78
PDLIM3-201ENST00000284767 TGFB1I1O43294 461 aa19.9■□□□□ 0.78
PDLIM3-201ENST00000284767 HIP1RO75146 1068 aa19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms