RNA–Protein interactions for RNA: ENST00000284049.7

CHD1-201, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD1, Length 6,457 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-201ENST00000284049 CGRRF1Q99675 332 aa3.09□□□□□ -1.91
CHD1-201ENST00000284049 ADAM19Q9H013 955 aa3.09□□□□□ -1.91
CHD1-201ENST00000284049 SAYSD1Q9NPB0 183 aa3.09□□□□□ -1.91
CHD1-201ENST00000284049 B4GALT6Q9UBX8 382 aa3.09□□□□□ -1.91
CHD1-201ENST00000284049 SUFUQ9UMX1 484 aa3.09□□□□□ -1.91
CHD1-201ENST00000284049 STXBP5LQ9Y2K9 1186 aa3.09□□□□□ -1.91
CHD1-201ENST00000284049 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP3.09□□□□□ -1.91
CHD1-201ENST00000284049 MED14O60244 1454 aa3.09□□□□□ -1.91
CHD1-201ENST00000284049 SIGLEC1Q9BZZ2 1709 aa3.09□□□□□ -1.92
CHD1-201ENST00000284049 PLA2R1Q13018 1463 aa3.09□□□□□ -1.92
CHD1-201ENST00000284049 CCDC66A2RUB6 948 aa3.09□□□□□ -1.92
CHD1-201ENST00000284049 FSCN2O14926 492 aa3.09□□□□□ -1.92
CHD1-201ENST00000284049 UBXN7O94888 489 aa3.09□□□□□ -1.92
CHD1-201ENST00000284049 ATP2A2P16615 1042 aaKnown RBP3.09□□□□□ -1.92
CHD1-201ENST00000284049 EPHA1P21709 976 aa3.09□□□□□ -1.92
CHD1-201ENST00000284049 ITGA8P53708 1063 aa3.09□□□□□ -1.92
CHD1-201ENST00000284049 ID3Q02535 119 aa3.09□□□□□ -1.92
CHD1-201ENST00000284049 PPP2R5CQ13362 524 aa3.09□□□□□ -1.92
CHD1-201ENST00000284049 DUOXA2Q1HG44 320 aa3.09□□□□□ -1.92
CHD1-201ENST00000284049 SLC45A4Q5BKX6 768 aa3.09□□□□□ -1.92
CHD1-201ENST00000284049 SPATA1Q5VX52 437 aa3.09□□□□□ -1.92
CHD1-201ENST00000284049 LMBR1LQ6UX01 489 aa3.09□□□□□ -1.92
CHD1-201ENST00000284049 ATF7IPQ6VMQ6 1270 aa3.09□□□□□ -1.92
CHD1-201ENST00000284049 C17orf53Q8N3J3 647 aaPredicted RBP3.09□□□□□ -1.92
CHD1-201ENST00000284049 RIN2Q8WYP3 895 aaPredicted RBP3.09□□□□□ -1.92
CHD1-201ENST00000284049 HVCN1Q96D96 273 aa3.09□□□□□ -1.92
CHD1-201ENST00000284049 KIF1BPQ96EK5 621 aa3.09□□□□□ -1.92
CHD1-201ENST00000284049 SERHLQ9NQF3 203 aa3.09□□□□□ -1.92
CHD1-201ENST00000284049 ZSCAN32Q9NX65 697 aa3.09□□□□□ -1.92
CHD1-201ENST00000284049 MOSPD1Q9UJG1 213 aa3.09□□□□□ -1.92
CHD1-201ENST00000284049 VPS28Q9UK41 221 aa3.09□□□□□ -1.92
CHD1-201ENST00000284049 ADAM30Q9UKF2 790 aa3.09□□□□□ -1.92
CHD1-201ENST00000284049 SOX13Q9UN79 622 aa3.09□□□□□ -1.92
CHD1-201ENST00000284049 SETD1AO15047 1707 aaKnown RBP3.09□□□□□ -1.92
CHD1-201ENST00000284049 SLIT1O75093 1534 aa3.09□□□□□ -1.92
CHD1-201ENST00000284049 J3QL48 77 aa3.09□□□□□ -1.92
CHD1-201ENST00000284049 PRPF6O94906 941 aaKnown RBP3.09□□□□□ -1.92
CHD1-201ENST00000284049 BCL6P41182 706 aa3.09□□□□□ -1.92
CHD1-201ENST00000284049 RAD52P43351 418 aa3.09□□□□□ -1.92
CHD1-201ENST00000284049 SLMAPQ14BN4 828 aa3.09□□□□□ -1.92
CHD1-201ENST00000284049 DACT2Q5SW24 774 aa3.09□□□□□ -1.92
CHD1-201ENST00000284049 INTS11Q5TA45 600 aaKnown RBP3.09□□□□□ -1.92
CHD1-201ENST00000284049 GPR139Q6DWJ6 353 aa3.09□□□□□ -1.92
CHD1-201ENST00000284049 IQCEQ6IPM2 695 aa3.09□□□□□ -1.92
CHD1-201ENST00000284049 TLDC1Q6P9B6 456 aa3.09□□□□□ -1.92
CHD1-201ENST00000284049 CRTC3Q6UUV7 619 aa3.09□□□□□ -1.92
CHD1-201ENST00000284049 GPR155Q7Z3F1 870 aa3.09□□□□□ -1.92
CHD1-201ENST00000284049 SYT9Q86SS6 491 aa3.09□□□□□ -1.92
CHD1-201ENST00000284049 UNC45BQ8IWX7 931 aa3.09□□□□□ -1.92
CHD1-201ENST00000284049 FTSJ3Q8IY81 847 aaKnown RBP3.09□□□□□ -1.92
CHD1-201ENST00000284049 SMYD4Q8IYR2 804 aaPredicted RBP3.09□□□□□ -1.92
CHD1-201ENST00000284049 MPP5Q8N3R9 675 aa3.09□□□□□ -1.92
CHD1-201ENST00000284049 ABHD17AQ96GS6 310 aa3.09□□□□□ -1.92
CHD1-201ENST00000284049 EPC1Q9H2F5 836 aa3.09□□□□□ -1.92
CHD1-201ENST00000284049 PRDM5Q9NQX1 630 aaPredicted RBP3.09□□□□□ -1.92
CHD1-201ENST00000284049 ARGLU1Q9NWB6 273 aaPredicted RBP3.09□□□□□ -1.92
CHD1-201ENST00000284049 PCDHGA2Q9Y5H1 932 aa3.09□□□□□ -1.92
CHD1-201ENST00000284049 LRRC7Q96NW7 1537 aa3.09□□□□□ -1.92
CHD1-201ENST00000284049 HOXD12P35452 270 aa3.08□□□□□ -1.92
CHD1-201ENST00000284049 PIK3CBP42338 1070 aa3.08□□□□□ -1.92
CHD1-201ENST00000284049 EIF5P55010 431 aaKnown RBP3.08□□□□□ -1.92
CHD1-201ENST00000284049 KCNQ4P56696 695 aa3.08□□□□□ -1.92
CHD1-201ENST00000284049 OLFM4Q6UX06 510 aa3.08□□□□□ -1.92
CHD1-201ENST00000284049 CDH24Q86UP0 819 aa3.08□□□□□ -1.92
CHD1-201ENST00000284049 WDR63Q8IWG1 891 aa3.08□□□□□ -1.92
CHD1-201ENST00000284049 TBC1D22AQ8WUA7 517 aa3.08□□□□□ -1.92
CHD1-201ENST00000284049 KLHDC7BQ96G42 594 aa3.08□□□□□ -1.92
CHD1-201ENST00000284049 MPHOSPH8Q99549 860 aa3.08□□□□□ -1.92
CHD1-201ENST00000284049 NKX2-4Q9H2Z4 354 aa3.08□□□□□ -1.92
CHD1-201ENST00000284049 BLOC1S4Q9NUP1 217 aa3.08□□□□□ -1.92
CHD1-201ENST00000284049 KIF17Q9P2E2 1029 aa3.08□□□□□ -1.92
CHD1-201ENST00000284049 PPARGC1AQ9UBK2 798 aaKnown RBP3.08□□□□□ -1.92
CHD1-201ENST00000284049 CNTLNQ9NXG0 1405 aa3.08□□□□□ -1.92
CHD1-201ENST00000284049 NEURL1BA8MQ27 555 aa3.08□□□□□ -1.92
CHD1-201ENST00000284049 A8MV72 311 aaPredicted RBP3.08□□□□□ -1.92
CHD1-201ENST00000284049 NCAM2O15394 837 aa3.08□□□□□ -1.92
CHD1-201ENST00000284049 DAPK3O43293 454 aa3.08□□□□□ -1.92
CHD1-201ENST00000284049 HRO43593 1189 aa3.08□□□□□ -1.92
CHD1-201ENST00000284049 RASSF9O75901 435 aa3.08□□□□□ -1.92
CHD1-201ENST00000284049 CCR9P51686 369 aa3.08□□□□□ -1.92
CHD1-201ENST00000284049 ADKP55263 362 aaKnown RBP3.08□□□□□ -1.92
CHD1-201ENST00000284049 EIF2B5Q13144 721 aaKnown RBP3.08□□□□□ -1.92
CHD1-201ENST00000284049 TTLL4Q14679 1199 aa3.08□□□□□ -1.92
CHD1-201ENST00000284049 POLD3Q15054 466 aaPredicted RBP3.08□□□□□ -1.92
CHD1-201ENST00000284049 KLHL24Q6TFL4 600 aa3.08□□□□□ -1.92
CHD1-201ENST00000284049 MIGA2Q7L4E1 593 aa3.08□□□□□ -1.92
CHD1-201ENST00000284049 CPNE8Q86YQ8 564 aa3.08□□□□□ -1.92
CHD1-201ENST00000284049 MCATQ8IVS2 390 aaKnown RBP3.08□□□□□ -1.92
CHD1-201ENST00000284049 HIPK4Q8NE63 616 aa3.08□□□□□ -1.92
CHD1-201ENST00000284049 CCDC86Q9H6F5 360 aaKnown RBP3.08□□□□□ -1.92
CHD1-201ENST00000284049 STARD7Q9NQZ5 370 aa3.08□□□□□ -1.92
CHD1-201ENST00000284049 RASSF1Q9NS23 344 aa3.08□□□□□ -1.92
CHD1-201ENST00000284049 TJP2Q9UDY2 1190 aa3.08□□□□□ -1.92
CHD1-201ENST00000284049 PGAP2Q9UHJ9 254 aa3.08□□□□□ -1.92
CHD1-201ENST00000284049 POLHQ9Y253 713 aa3.08□□□□□ -1.92
CHD1-201ENST00000284049 POTEB3A0JP26 581 aa3.08□□□□□ -1.92
CHD1-201ENST00000284049 ABCC5O15440 1437 aa3.08□□□□□ -1.92
CHD1-201ENST00000284049 DNAJA2O60884 412 aa3.08□□□□□ -1.92
CHD1-201ENST00000284049 CD4P01730 458 aa3.08□□□□□ -1.92
CHD1-201ENST00000284049 COL6A2P12110 1019 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms