RNA–Protein interactions for RNA: ENST00000283254.11

SCN3A-201, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCN3A, Length 9,091 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-201ENST00000283254 PI4K2BG5E9Z4 385 aa4.33□□□□□ -1.72
SCN3A-201ENST00000283254 SMAPO00193 183 aa4.33□□□□□ -1.72
SCN3A-201ENST00000283254 MAGEB2O15479 319 aa4.33□□□□□ -1.72
SCN3A-201ENST00000283254 HOXA2O43364 376 aa4.33□□□□□ -1.72
SCN3A-201ENST00000283254 SLC2A3P11169 496 aa4.33□□□□□ -1.72
SCN3A-201ENST00000283254 CASP14P31944 242 aa4.33□□□□□ -1.72
SCN3A-201ENST00000283254 PLTPP55058 493 aa4.33□□□□□ -1.72
SCN3A-201ENST00000283254 PRAMEP78395 509 aa4.33□□□□□ -1.72
SCN3A-201ENST00000283254 IMPG1Q17R60 797 aa4.33□□□□□ -1.72
SCN3A-201ENST00000283254 ZNF658Q5TYW1 1059 aaPredicted RBP4.33□□□□□ -1.72
SCN3A-201ENST00000283254 TRMT10CQ7L0Y3 403 aaKnown RBP4.33□□□□□ -1.72
SCN3A-201ENST00000283254 STKLD1Q8NE28 680 aa4.33□□□□□ -1.72
SCN3A-201ENST00000283254 STAMQ92783 540 aa4.33□□□□□ -1.72
SCN3A-201ENST00000283254 PBXIP1Q96AQ6 731 aa4.33□□□□□ -1.72
SCN3A-201ENST00000283254 DBNDD1Q9H9R9 158 aa4.33□□□□□ -1.72
SCN3A-201ENST00000283254 UBE2TQ9NPD8 197 aaPredicted RBP4.33□□□□□ -1.72
SCN3A-201ENST00000283254 ZNF302Q9NR11 478 aa4.33□□□□□ -1.72
SCN3A-201ENST00000283254 RGL1Q9NZL6 768 aa4.33□□□□□ -1.72
SCN3A-201ENST00000283254 SCOCQ9UIL1 159 aa4.33□□□□□ -1.72
SCN3A-201ENST00000283254 BLOC1S6Q9UL45 172 aa4.33□□□□□ -1.72
SCN3A-201ENST00000283254 G3BP2Q9UN86 482 aaKnown RBP4.33□□□□□ -1.72
SCN3A-201ENST00000283254 IPPQ9Y573 584 aa4.33□□□□□ -1.72
SCN3A-201ENST00000283254 PIK3R2O00459 728 aa4.33□□□□□ -1.72
SCN3A-201ENST00000283254 COPEO14579 308 aa4.33□□□□□ -1.72
SCN3A-201ENST00000283254 SLC26A4O43511 780 aa4.33□□□□□ -1.72
SCN3A-201ENST00000283254 BUB1O43683 1085 aa4.33□□□□□ -1.72
SCN3A-201ENST00000283254 DNAJC6O75061 913 aa4.33□□□□□ -1.72
SCN3A-201ENST00000283254 ALDH1A2O94788 518 aa4.33□□□□□ -1.72
SCN3A-201ENST00000283254 GSNP06396 782 aa4.33□□□□□ -1.72
SCN3A-201ENST00000283254 ADKP55263 362 aaKnown RBP4.33□□□□□ -1.72
SCN3A-201ENST00000283254 ABCE1P61221 599 aaKnown RBP4.33□□□□□ -1.72
SCN3A-201ENST00000283254 PSMC5P62195 406 aa4.33□□□□□ -1.72
SCN3A-201ENST00000283254 ILF2Q12905 390 aaKnown RBP4.33□□□□□ -1.72
SCN3A-201ENST00000283254 XRRA1Q6P2D8 792 aa4.33□□□□□ -1.72
SCN3A-201ENST00000283254 USP17L2Q6R6M4 530 aa4.33□□□□□ -1.72
SCN3A-201ENST00000283254 PADI6Q6TGC4 694 aa4.33□□□□□ -1.72
SCN3A-201ENST00000283254 HAUS6Q7Z4H7 955 aa4.33□□□□□ -1.72
SCN3A-201ENST00000283254 APPL2Q8NEU8 664 aa4.33□□□□□ -1.72
SCN3A-201ENST00000283254 VPS37AQ8NEZ2 397 aa4.33□□□□□ -1.72
SCN3A-201ENST00000283254 USP28Q96RU2 1077 aa4.33□□□□□ -1.72
SCN3A-201ENST00000283254 WRNIP1Q96S55 665 aa4.33□□□□□ -1.72
SCN3A-201ENST00000283254 DESI2Q9BSY9 194 aa4.33□□□□□ -1.72
SCN3A-201ENST00000283254 TEX13BQ9BXU2 312 aa4.33□□□□□ -1.72
SCN3A-201ENST00000283254 PSD3Q9NYI0 1048 aa4.33□□□□□ -1.72
SCN3A-201ENST00000283254 EIF2AK3Q9NZJ5 1116 aaKnown RBP4.33□□□□□ -1.72
SCN3A-201ENST00000283254 INPP5FQ9Y2H2 1132 aa4.33□□□□□ -1.72
SCN3A-201ENST00000283254 USP17L10C9JJH3 530 aa4.33□□□□□ -1.72
SCN3A-201ENST00000283254 MMP1P03956 469 aa4.33□□□□□ -1.72
SCN3A-201ENST00000283254 MAP4P27816 1152 aaKnown RBP4.33□□□□□ -1.72
SCN3A-201ENST00000283254 OCA2Q04671 838 aa4.33□□□□□ -1.72
SCN3A-201ENST00000283254 NBPF9Q3BBW0 867 aa4.33□□□□□ -1.72
SCN3A-201ENST00000283254 C6orf118Q5T5N4 469 aa4.33□□□□□ -1.72
SCN3A-201ENST00000283254 ARMC6Q6NXE6 501 aa4.33□□□□□ -1.72
SCN3A-201ENST00000283254 SMAP1Q8IYB5 467 aaPredicted RBP4.33□□□□□ -1.72
SCN3A-201ENST00000283254 DCP1BQ8IZD4 617 aaKnown RBP4.33□□□□□ -1.72
SCN3A-201ENST00000283254 USP13Q92995 863 aaPredicted RBP4.33□□□□□ -1.72
SCN3A-201ENST00000283254 BHMT2Q9H2M3 363 aa4.33□□□□□ -1.72
SCN3A-201ENST00000283254 SPON1Q9HCB6 807 aa4.33□□□□□ -1.72
SCN3A-201ENST00000283254 ZSWIM6Q9HCJ5 1215 aa4.33□□□□□ -1.72
SCN3A-201ENST00000283254 ZBTB1Q9Y2K1 713 aa4.33□□□□□ -1.72
SCN3A-201ENST00000283254 CAPN7Q9Y6W3 813 aa4.33□□□□□ -1.72
SCN3A-201ENST00000283254 SPACA6W5XKT8 324 aa4.33□□□□□ -1.72
SCN3A-201ENST00000283254 MTSS1O43312 755 aa4.33□□□□□ -1.72
SCN3A-201ENST00000283254 FAM107AO95990 144 aa4.33□□□□□ -1.72
SCN3A-201ENST00000283254 PLA2G4BP0C869 781 aa4.33□□□□□ -1.72
SCN3A-201ENST00000283254 PRELPP51888 382 aa4.33□□□□□ -1.72
SCN3A-201ENST00000283254 NCKAP1LP55160 1127 aa4.33□□□□□ -1.72
SCN3A-201ENST00000283254 BCAR1P56945 870 aa4.33□□□□□ -1.72
SCN3A-201ENST00000283254 TMPRSS15P98073 1019 aa4.33□□□□□ -1.72
SCN3A-201ENST00000283254 TMEM132BQ14DG7 1078 aa4.33□□□□□ -1.72
SCN3A-201ENST00000283254 ME3Q16798 604 aa4.33□□□□□ -1.72
SCN3A-201ENST00000283254 ZC3H12BQ5HYM0 836 aaKnown RBP4.33□□□□□ -1.72
SCN3A-201ENST00000283254 THNSL1Q8IYQ7 743 aa4.33□□□□□ -1.72
SCN3A-201ENST00000283254 MYCBPQ99417 103 aaPredicted RBP4.33□□□□□ -1.72
SCN3A-201ENST00000283254 MRPL4Q9BYD3 311 aaKnown RBP4.33□□□□□ -1.72
SCN3A-201ENST00000283254 UVRAGQ9P2Y5 699 aa4.33□□□□□ -1.72
SCN3A-201ENST00000283254 ANO9A1A5B4 782 aa4.32□□□□□ -1.72
SCN3A-201ENST00000283254 SPAG7O75391 227 aa4.32□□□□□ -1.72
SCN3A-201ENST00000283254 ANP32DO95626 131 aa4.32□□□□□ -1.72
SCN3A-201ENST00000283254 SERPING1P05155 500 aa4.32□□□□□ -1.72
SCN3A-201ENST00000283254 KCNA2P16389 499 aa4.32□□□□□ -1.72
SCN3A-201ENST00000283254 CDC25BP30305 580 aa4.32□□□□□ -1.72
SCN3A-201ENST00000283254 GCKP35557 465 aa4.32□□□□□ -1.72
SCN3A-201ENST00000283254 COPS2P61201 443 aa4.32□□□□□ -1.72
SCN3A-201ENST00000283254 DYNLT1P63172 113 aa4.32□□□□□ -1.72
SCN3A-201ENST00000283254 KIF19Q2TAC6 998 aa4.32□□□□□ -1.72
SCN3A-201ENST00000283254 HP1BP3Q5SSJ5 553 aaPredicted RBP4.32□□□□□ -1.72
SCN3A-201ENST00000283254 TRIM68Q6AZZ1 485 aa4.32□□□□□ -1.72
SCN3A-201ENST00000283254 PLEKHM3Q6ZWE6 761 aa4.32□□□□□ -1.72
SCN3A-201ENST00000283254 TAGAPQ8N103 731 aa4.32□□□□□ -1.72
SCN3A-201ENST00000283254 CALML6Q8TD86 181 aa4.32□□□□□ -1.72
SCN3A-201ENST00000283254 BCAS4Q8TDM0 211 aa4.32□□□□□ -1.72
SCN3A-201ENST00000283254 OTUD7AQ8TE49 926 aaPredicted RBP4.32□□□□□ -1.72
SCN3A-201ENST00000283254 MAML1Q92585 1016 aa4.32□□□□□ -1.72
SCN3A-201ENST00000283254 GREM2Q9H772 168 aa4.32□□□□□ -1.72
SCN3A-201ENST00000283254 AIPL1Q9NZN9 384 aa4.32□□□□□ -1.72
SCN3A-201ENST00000283254 ZFATQ9P243 1243 aa4.32□□□□□ -1.72
SCN3A-201ENST00000283254 SNX5Q9Y5X3 404 aa4.32□□□□□ -1.72
SCN3A-201ENST00000283254 UGGT1Q9NYU2 1555 aa4.32□□□□□ -1.72
SCN3A-201ENST00000283254 METP08581 1390 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms